CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.107740
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.107740
T284403_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD
HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.703
0.720
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.703
0.720
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.703
0.720
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.107740.2
Myb
14
61
KGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWFNYL
Cucsa.107740.2
Myb
67
112
RGMFSQQEDEKILTLHRLLGNRWSQIAQHLAGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
263 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla006288
Citrullus lanatus
Cla006288
I
0.870
Cucsa.107730
Cucumis sativus
Cucsa.107730
N
0.861
Gorai.007G011100
Gossypium raimondii
Gorai.007G011100
I
0.723
MTR_7g111290
Medicago truncatula
MTR_7g111290
I
0.716
Eucgr.K00250
Eucalyptus grandis
Eucgr.K00250
I
0.714
MTR_6g055910
Medicago truncatula
MTR_6g055910
I
0.710
BRADI2G11080
Brachypodium distachyon
BRADI2G11080
I
0.705
PK18276.1
Cannabis sativa
PK18276.1
I
0.705
GLYMA02G00960
Glycine max
GLYMA02G00960
I
0.703
GLYMA03G38410
Glycine max
GLYMA03G38410
I
0.703
GLYMA03G38660
Glycine max
GLYMA03G38660
I
0.703
Cagra.0334s0011
Capsella grandiflora
Cagra.0334s0011
I
0.703
Ciclev10020144m.g
Citrus clementina
Ciclev10020144m.g
I
0.703
Carubv10001308m.g
Capsella rubella
Carubv10001308m.g
I
0.703
GLYMA10G27940
Glycine max
GLYMA10G27940
I
0.703
Bostr.4825s0008
Boechera stricta
Bostr.4825s0008
I
0.703
MYB55
Arabidopsis lyrata
fgenesh2_kg.6__3543__AT4G01680.1
I
0.703
GLYMA20G22230
Glycine max
GLYMA20G22230
I
0.703
MTR_1g085040
Medicago truncatula
MTR_1g085040
I
0.703
MTR_1g085640
Medicago truncatula
MTR_1g085640
I
0.703
MTR_7g110830
Medicago truncatula
MTR_7g110830
I
0.703
POPTR_0014s10680
Populus trichocarpa
POPTR_0014s10680
I
0.703
TCM_004965
Theobroma cacao
TCM_004965
I
0.703
Ca_01072
Cicer arietinum
Ca_01072
I
0.703
GLYMA19G41250
Glycine max
GLYMA19G41250
I
0.703
cassava33008.m1
Manihot esculenta
cassava33008.m1
I
0.703
Ca_03589
Cicer arietinum
Ca_03589
I
0.703
Ca_03564
Cicer arietinum
Ca_03564
I
0.703
GLYMA10G28250
Glycine max
GLYMA10G28250
I
0.703
GLYMA19G41010
Glycine max
GLYMA19G41010
I
0.703
Lus10038022.g
Linum usitatissimum
Lus10038022.g
I
0.703
Gorai.008G133700
Gossypium raimondii
Gorai.008G133700
I
0.703
Bo9g004210
Brassica oleracea
Bo9g004210
I
0.703
MYB55
Arabidopsis thaliana
AT4G01680
D
0.703
orange1.1g013300m.g
Citrus sinensis
orange1.1g013300m.g
I
0.703
SapurV1A.0321s0070
Salix purpurea
SapurV1A.0321s0070
I
0.703
Gorai.007G118200
Gossypium raimondii
Gorai.007G118200
I
0.703
Gorai.008G277900
Gossypium raimondii
Gorai.008G277900
I
0.703
Bra036317
Brassica rapa
Bra036317
I
0.703
SapurV1A.3474s0020
Salix purpurea
SapurV1A.3474s0020
I
0.703
Gorai.001G148500
Gossypium raimondii
Gorai.001G148500
I
0.703
Gorai.004G147600
Gossypium raimondii
Gorai.004G147600
I
0.703
chr5.CM0048.320.nd
Lotus japonicus
chr5.CM0048.320.nd
I
0.703
GSMUA_Achr11G15910_001
Musa acuminata
GSMUA_Achr11G15910_001
I
0.702
GSMUA_Achr5G18400_001
Musa acuminata
GSMUA_Achr5G18400_001
I
0.702
GSMUA_Achr2G18440_001
Musa acuminata
GSMUA_Achr2G18440_001
I
0.702
GSMUA_Achr11G00430_001
Musa acuminata
GSMUA_Achr11G00430_001
I
0.702
MTR_1g100667
Medicago truncatula
MTR_1g100667
I
0.702
Sb09g003100
Sorghum bicolor
Sb09g003100
I
0.702
SELMODRAFT_437219
Selaginella moellendorffii
SELMODRAFT_437219
I
0.698
Traes_1BS_92EA1F290
Triticum aestivum
Traes_1BS_92EA1F290
I
0.698
Traes_1DS_5BAD8947E
Triticum aestivum
Traes_1DS_5BAD8947E
I
0.698
BRADI2G36730
Brachypodium distachyon
BRADI2G36730
I
0.698
F775_28584
Aegilops tauschii
F775_28584
I
0.698
MLOC_59663
Hordeum vulgare
MLOC_59663
I
0.698
TCM_015157
Theobroma cacao
TCM_015157
I
0.698
Traes_1AS_1EE692FDC
Triticum aestivum
Traes_1AS_1EE692FDC
I
0.698
GLYMA10G38110
Glycine max
GLYMA10G38110
I
0.697
GLYMA20G29710
Glycine max
GLYMA20G29710
I
0.697
chr5.CM0048.130.nc
Lotus japonicus
chr5.CM0048.130.nc
I
0.696
PGSC0003DMG400015767
Solanum tuberosum
PGSC0003DMG400015767
I
0.696
GSMUA_Achr3G12200_001
Musa acuminata
GSMUA_Achr3G12200_001
I
0.695
Si036638m.g
Setaria italica
Si036638m.g
I
0.694
Pavir.J03230
Panicum virgatum
Pavir.J03230
I
0.694
GRMZM2G147698
Zea mays
GRMZM2G147698
I
0.694
PK03176.1
Cannabis sativa
PK03176.1
I
0.693
AMTR_s00045p00146180
Amborella trichopoda
AMTR_s00045p00146180
I
0.693
OPUNC05G02540
Oryza punctata
OPUNC05G02540
I
0.693
OPUNC01G11600
Oryza punctata
OPUNC01G11600
I
0.693
ONIVA05G02580
Oryza nivara
ONIVA05G02580
I
0.693
ONIVA01G14120
Oryza nivara
ONIVA01G14120
I
0.693
ORGLA01G0100400
Oryza glaberrima
ORGLA01G0100400
I
0.693
ORGLA05G0025500
Oryza glaberrima
ORGLA05G0025500
I
0.693
Sb03g011640
Sorghum bicolor
Sb03g011640
I
0.693
OS01G0285300
Oryza sativa
OS01G0285300
I
0.693
ORUFI05G02790
Oryza rufipogon
ORUFI05G02790
I
0.693
ORUFI01G12800
Oryza rufipogon
ORUFI01G12800
I
0.693
Si001565m.g
Setaria italica
Si001565m.g
I
0.693
VIT_14s0060g00240
Vitis vinifera
VIT_14s0060g00240
I
0.693
MDP0000932804
Malus domestica
MDP0000932804
I
0.693
Cucsa.051050
Cucumis sativus
Cucsa.051050
I
0.693
OMERI05G02610
Oryza meridionalis
OMERI05G02610
I
0.693
Pavir.Ea01054
Panicum virgatum
Pavir.Ea01054
I
0.693
MDP0000653903
Malus domestica
MDP0000653903
I
0.693
MDP0000601420
Malus domestica
MDP0000601420
I
0.693
Eucgr.B02197
Eucalyptus grandis
Eucgr.B02197
I
0.693
Aquca_003_00245
Aquilegia coerulea
Aquca_003_00245
I
0.693
mgf003709m
Mimulus guttatus
mgf003709m
I
0.693
Pavir.Eb01178
Panicum virgatum
Pavir.Eb01178
I
0.693
cassava17679.valid.m1
Manihot esculenta
cassava17679.valid.m1
I
0.693
gene22961-v1.0-hybrid
Fragaria vesca
gene22961-v1.0-hybrid
I
0.693
TCM_026853
Theobroma cacao
TCM_026853
I
0.693
Pavir.J40848
Panicum virgatum
Pavir.J40848
I
0.693
Si022113m.g
Setaria italica
Si022113m.g
I
0.693
Pavir.J31344
Panicum virgatum
Pavir.J31344
I
0.693
Pavir.Gb00734
Panicum virgatum
Pavir.Gb00734
I
0.693
cassava12868.valid.m1
Manihot esculenta
cassava12868.valid.m1
I
0.693
Pavir.Ga00879
Panicum virgatum
Pavir.Ga00879
I
0.693
Cla005219
Citrullus lanatus
Cla005219
I
0.693
Si012304m.g
Setaria italica
Si012304m.g
I
0.693
OS05G0140100
Oryza sativa
OS05G0140100
I
0.693
LPERR01G10930
Leersia perrieri
LPERR01G10930
I
0.693
GSMUA_Achr3G24580_001
Musa acuminata
GSMUA_Achr3G24580_001
I
0.693
GRMZM2G171781
Zea mays
GRMZM2G171781
I
0.693
OBART01G11910
Oryza barthii
OBART01G11910
I
0.693
OGLUM01G13340
Oryza glumaepatula
OGLUM01G13340
I
0.693
LPERR05G02400
Leersia perrieri
LPERR05G02400
I
0.693
OB05G12630
Oryza brachyantha
OB05G12630
I
0.693
OB01G21720
Oryza brachyantha
OB01G21720
I
0.693
OBART05G02690
Oryza barthii
OBART05G02690
I
0.693
OGLUM05G02680
Oryza glumaepatula
OGLUM05G02680
I
0.693
GRMZM2G127490
Zea mays
GRMZM2G127490
I
0.693
OLONG_014417
Oryza longistaminata
OLONG_014417
I
0.693
BGIOSGA019160
Oryza indica
BGIOSGA019160
I
0.693
BGIOSGA001872
Oryza indica
BGIOSGA001872
I
0.693
OLONG_008768
Oryza longistaminata
OLONG_008768
I
0.693
cassava26284.m1
Manihot esculenta
cassava26284.m1
I
0.691
GLYMA16G31280
Glycine max
GLYMA16G31280
I
0.690
chr5.CM0148.380.nc
Lotus japonicus
chr5.CM0148.380.nc
I
0.690
Sb04g024000
Sorghum bicolor
Sb04g024000
I
0.688
Pavir.Ab02021
Panicum virgatum
Pavir.Ab02021
I
0.688
Si017851m.g
Setaria italica
Si017851m.g
I
0.688
Thhalv10028778m.g
Eutrema salsugineum
Thhalv10028778m.g
I
0.686
POPTR_0002s18700
Populus trichocarpa
POPTR_0002s18700
I
0.686
Lus10039213.g
Linum usitatissimum
Lus10039213.g
I
0.686
LAF1
Arabidopsis thaliana
AT4G25560
I
0.686
Lus10027458.g
Linum usitatissimum
Lus10027458.g
I
0.686
mgf024107m
Mimulus guttatus
mgf024107m
I
0.686
VIT_07s0005g02480
Vitis vinifera
VIT_07s0005g02480
I
0.686
Solyc01g102340.2
Solanum lycopersicum
Solyc01g102340.2
I
0.685
PGSC0003DMG400018279
Solanum tuberosum
PGSC0003DMG400018279
I
0.685
Solyc10g044680.1
Solanum lycopersicum
Solyc10g044680.1
I
0.685
ORUFI04G21270
Oryza rufipogon
ORUFI04G21270
I
0.684
OMERI04G16730
Oryza meridionalis
OMERI04G16730
I
0.684
ONIVA04G17950
Oryza nivara
ONIVA04G17950
I
0.684
ORGLA04G0168700
Oryza glaberrima
ORGLA04G0168700
I
0.684
OPUNC04G17450
Oryza punctata
OPUNC04G17450
I
0.684
ORGLA10G0151700
Oryza glaberrima
ORGLA10G0151700
I
0.684
Pm003267
Prunus mume
Pm003267
I
0.684
PRUPE_ppa019718mg
Prunus persica
PRUPE_ppa019718mg
I
0.684
OGLUM04G19590
Oryza glumaepatula
OGLUM04G19590
I
0.684
OBART04G19730
Oryza barthii
OBART04G19730
I
0.684
BGIOSGA016820
Oryza indica
BGIOSGA016820
I
0.684
OS04G0532800
Oryza sativa
OS04G0532800
I
0.684
MLOC_73614
Hordeum vulgare
MLOC_73614
I
0.681
Traes_2AL_2D4100475
Triticum aestivum
Traes_2AL_2D4100475
I
0.681
Traes_2BL_7CEC6A8D7
Triticum aestivum
Traes_2BL_7CEC6A8D7
I
0.681
Traes_2BL_35241DE8D
Triticum aestivum
Traes_2BL_35241DE8D
I
0.681
TRIUR3_15020
Triticum urartu
TRIUR3_15020
I
0.681
GSMUA_Achr1G25120_001
Musa acuminata
GSMUA_Achr1G25120_001
I
0.680
GLYMA09G25655
Glycine max
GLYMA09G25655
I
0.680
Bostr.30057s0004
Boechera stricta
Bostr.30057s0004
I
0.680
gw1.277.32.1
Physcomitrella patens
gw1.277.32.1
I
0.678
BRADI5G16672
Brachypodium distachyon
BRADI5G16672
I
0.677
Traes_2BL_604FE7639
Triticum aestivum
Traes_2BL_604FE7639
I
0.677
AtMYB18
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_7001401
I
0.677
Traes_2BL_03F3475CD
Triticum aestivum
Traes_2BL_03F3475CD
I
0.677
Thhalv10023601m.g
Eutrema salsugineum
Thhalv10023601m.g
I
0.676
GRMZM2G017520
Zea mays
GRMZM2G017520
I
0.676
AtMYB50
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003728
I
0.676
e_gw1.24.66.1
Physcomitrella patens
e_gw1.24.66.1
I
0.676
AtMYB50
Arabidopsis thaliana
AT1G57560
I
0.676
GSMUA_Achr2G07930_001
Musa acuminata
GSMUA_Achr2G07930_001
I
0.676
fgenesh1_pg.scaffold_189000016
Physcomitrella patens
fgenesh1_pg.scaffold_189000016
I
0.676
GSMUA_Achr4G19560_001
Musa acuminata
GSMUA_Achr4G19560_001
I
0.675
Bo1g040300
Brassica oleracea
Bo1g040300
N
0.675
GSMUA_Achr8G11340_001
Musa acuminata
GSMUA_Achr8G11340_001
I
0.675
Cagra.23492s0001
Capsella grandiflora
Cagra.23492s0001
I
0.673
Ca_19758
Cicer arietinum
Ca_19758
I
0.673
Thhalv10004450m.g
Eutrema salsugineum
Thhalv10004450m.g
I
0.673
evm.TU.supercontig_107.47
Carica papaya
evm.TU.supercontig_107.47
I
0.673
Bostr.29827s0161
Boechera stricta
Bostr.29827s0161
I
0.673
Eucgr.K00555
Eucalyptus grandis
Eucgr.K00555
I
0.673
Ca_01055
Cicer arietinum
Ca_01055
I
0.673
ATMYB86
Arabidopsis lyrata
fgenesh2_kg.6__2630__AT5G26660.1
I
0.673
MYB86
Arabidopsis thaliana
AT5G26660
I
0.673
chr1.CM0122.20.nc
Lotus japonicus
chr1.CM0122.20.nc
I
0.673
Carubv10001224m.g
Capsella rubella
Carubv10001224m.g
I
0.673
GSMUA_Achr2G01830_001
Musa acuminata
GSMUA_Achr2G01830_001
I
0.673
chr1.CM0206.990.nd
Lotus japonicus
chr1.CM0206.990.nd
I
0.673
Bra036588
Brassica rapa
Bra036588
I
0.673
Bo9g010860
Brassica oleracea
Bo9g010860
I
0.673
SapurV1A.1077s0040
Salix purpurea
SapurV1A.1077s0040
I
0.673
Bo2g156300
Brassica oleracea
Bo2g156300
I
0.673
POPTR_0005s00340
Populus trichocarpa
POPTR_0005s00340
I
0.673
SapurV1A.1387s0090
Salix purpurea
SapurV1A.1387s0090
I
0.673
SapurV1A.1016s0030
Salix purpurea
SapurV1A.1016s0030
I
0.673
Bo7g095130
Brassica oleracea
Bo7g095130
I
0.673
Pavir.Ab02417
Panicum virgatum
Pavir.Ab02417
I
0.672
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.671
Bra019154
Brassica rapa
Bra019154
N
0.671
GLYMA02G12266
Glycine max
GLYMA02G12266
I
0.670
BRADI1G20250
Brachypodium distachyon
BRADI1G20250
I
0.669
PRUPE_ppa019729mg
Prunus persica
PRUPE_ppa019729mg
I
0.669
Pm019344
Prunus mume
Pm019344
I
0.669
cassava21326.m1
Manihot esculenta
cassava21326.m1
I
0.668
Bra013900
Brassica rapa
Bra013900
N
0.668
AtMYB19
Arabidopsis lyrata
fgenesh2_kg.8__1111__AT5G52260.1
I
0.667
Bostr.7305s0041
Boechera stricta
Bostr.7305s0041
I
0.667
Bra029129
Brassica rapa
Bra029129
I
0.667
Cla003497
Citrullus lanatus
Cla003497
I
0.667
Bo3g023270
Brassica oleracea
Bo3g023270
I
0.667
AtMYB19
Arabidopsis thaliana
AT5G52260
I
0.667
gene13281-v1.0-hybrid
Fragaria vesca
gene13281-v1.0-hybrid
I
0.667
BGIOSGA016547
Oryza indica
BGIOSGA016547
I
0.666
BGIOSGA008493
Oryza indica
BGIOSGA008493
I
0.666
BRADI3G46910
Brachypodium distachyon
BRADI3G46910
I
0.666
Eucgr.A00996
Eucalyptus grandis
Eucgr.A00996
I
0.666
ONIVA02G24090
Oryza nivara
ONIVA02G24090
I
0.666
BRADI5G12417
Brachypodium distachyon
BRADI5G12417
I
0.666
F775_26161
Aegilops tauschii
F775_26161
I
0.666
GRMZM2G032655
Zea mays
GRMZM2G032655
I
0.666
ORUFI02G22940
Oryza rufipogon
ORUFI02G22940
I
0.666
OBART04G14990
Oryza barthii
OBART04G14990
I
0.666
ORGLA04G0119800
Oryza glaberrima
ORGLA04G0119800
I
0.666
Traes_2DL_C964675DE
Triticum aestivum
Traes_2DL_C964675DE
I
0.666
Si010352m.g
Setaria italica
Si010352m.g
I
0.666
ORUFI04G16390
Oryza rufipogon
ORUFI04G16390
I
0.666
PDK_20s1606731g001
Phoenix dactylifera
PDK_20s1606731g001
I
0.666
OB04G22310
Oryza brachyantha
OB04G22310
I
0.666
OB02G29290
Oryza brachyantha
OB02G29290
I
0.666
TRIUR3_25784
Triticum urartu
TRIUR3_25784
I
0.666
OGLUM02G22040
Oryza glumaepatula
OGLUM02G22040
I
0.666
OMERI02G21400
Oryza meridionalis
OMERI02G21400
I
0.666
OBART02G21860
Oryza barthii
OBART02G21860
I
0.666
OS04G0461000
Oryza sativa
OS04G0461000
I
0.666
ONIVA04G13130
Oryza nivara
ONIVA04G13130
I
0.666
gw1.149.61.1
Physcomitrella patens
gw1.149.61.1
I
0.665
GSMUA_Achr1G18990_001
Musa acuminata
GSMUA_Achr1G18990_001
I
0.665
Thhalv10028864m.g
Eutrema salsugineum
Thhalv10028864m.g
I
0.665
SapurV1A.0264s0440
Salix purpurea
SapurV1A.0264s0440
I
0.665
Carubv10007732m.g
Capsella rubella
Carubv10007732m.g
I
0.665
Bostr.7867s0367
Boechera stricta
Bostr.7867s0367
I
0.665
Cagra.23907s0010
Capsella grandiflora
Cagra.23907s0010
I
0.665
ORUFI07G24600
Oryza rufipogon
ORUFI07G24600
I
0.664
Sb01g034270
Sorghum bicolor
Sb01g034270
I
0.664
BGIOSGA010658
Oryza indica
BGIOSGA010658
I
0.664
OMERI03G17220
Oryza meridionalis
OMERI03G17220
I
0.664
BGIOSGA026208
Oryza indica
BGIOSGA026208
I
0.664
LPERR07G20400
Leersia perrieri
LPERR07G20400
I
0.664
OPUNC07G22080
Oryza punctata
OPUNC07G22080
I
0.664
OGLUM07G23470
Oryza glumaepatula
OGLUM07G23470
I
0.664
ORGLA07G0264800
Oryza glaberrima
ORGLA07G0264800
I
0.664
ONIVA02G07540
Oryza nivara
ONIVA02G07540
I
0.664
MDP0000152575
Malus domestica
MDP0000152575
I
0.664
OMERI07G19830
Oryza meridionalis
OMERI07G19830
I
0.664
Si029872m.g
Setaria italica
Si029872m.g
I
0.664
GRMZM2G170049
Zea mays
GRMZM2G170049
I
0.663
Traes_6BL_CE61B9510
Triticum aestivum
Traes_6BL_CE61B9510
I
0.663
Traes_6DL_A014E9069
Triticum aestivum
Traes_6DL_A014E9069
I
0.663
Traes_6AL_D10CBA40D
Triticum aestivum
Traes_6AL_D10CBA40D
I
0.663
MLOC_13019
Hordeum vulgare
MLOC_13019
I
0.663
OB04G26810
Oryza brachyantha
OB04G26810
I
0.663
Si017947m.g
Setaria italica
Si017947m.g
I
0.663
Bo8g111090
Brassica oleracea
Bo8g111090
I
0.663
TRIUR3_32691
Triticum urartu
TRIUR3_32691
I
0.663
Cucsa.312940
Cucumis sativus
Cucsa.312940
I
0.663
F775_08647
Aegilops tauschii
F775_08647
I
0.663
Cla016484
Citrullus lanatus
Cla016484
I
0.663
Cucsa.090310
Cucumis sativus
Cucsa.090310
I
0.663
Cla020303
Citrullus lanatus
Cla020303
I
0.663
Bra031669
Brassica rapa
Bra031669
I
0.663
Traes_2AL_AF9357B4C
Triticum aestivum
Traes_2AL_AF9357B4C
N
0.661