MTR_4g088015 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_4g088015 T274812_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB98
M02301_2.00
Arabidopsis thaliana
NNGTAACGKMN

NKMCGTTACNN
PBM
Weirauch et al.(2014)
pTH8148
0.685 0.763
MYB98
M07108_2.00
Arabidopsis thaliana
DWWWHGTAACGKWHD

HDWMCGTTACDWWWH
Dap-seq
OMalley et al.(2016)
MYB98_col_a
0.685 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH30940 Myb 221 267
KEH30940 Myb 273 318

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACUA008027 Anopheles culicifacies ACUA008027 N 0.000
AMAM002480 Anopheles maculatus AMAM002480 N 0.000
AMIN008664 Anopheles minimus AMIN008664 N 0.000
swi/snf Ciona intestinalis ENSCING00000004110 N 0.000
ENSCSAVG00000004620 Ciona savignyi ENSCSAVG00000004620 N 0.000
csin106540 Clonorchis sinensis csin106540 N 0.000
CGI_10021531 Crassostrea gigas CGI_10021531 N 0.000
YQE_02907 Dendroctonus ponderosae YQE_02907 N 0.000
DILT_0001089701 Diphyllobothrium latum DILT_0001089701 N 0.000
ECANG7_04410 Echinococcus canadensis ECANG7_04410 N 0.000
EmuJ_001187700 Echinococcus multilocularis EmuJ_001187700 N 0.000
ENSEEUG00000014927 Erinaceus europaeus ENSEEUG00000014927 N 0.000
D915_01091 Fasciola hepatica D915_01091 N 0.000
ENSGGOG00000012841 Gorilla gorilla ENSGGOG00000012841 N 0.000
HMEL004008 Heliconius melpomene HMEL004008 N 0.000
TTAC_0000153401 Hydatigera taeniaeformis TTAC_0000153401 N 0.000
HDID_0000819001 Hymenolepis diminuta HDID_0000819001 N 0.000
HmN_000065900 Hymenolepis microstoma HmN_000065900 N 0.000
HNAJ_0000675501 Hymenolepis nana HNAJ_0000675501 N 0.000
LDEC005088 Leptinotarsa decemlineata LDEC005088 N 0.000
LotgiG182249 Lottia gigantea LotgiG182249 N 0.000
Ocbimv22035363m.g Octopus bimaculoides Ocbimv22035363m.g N 0.000
T265_00769 Opisthorchis viverrini T265_00769 N 0.000
scaffold164-EXSNAP2012.18 Pristionchus exspectatus scaffold164-EXSNAP2012.18 N 0.000
SMARCA1 Pteropus vampyrus ENSPVAG00000003805 N 0.000
Smarca5 Rattus norvegicus ENSRNOG00000021584 N 0.000
nRc.2.0.1.g17886 Romanomermis culicivorax nRc.2.0.1.g17886 N 0.000
Sakowv30022101m.g Saccoglossus kowalevskii Sakowv30022101m.g N 0.000
SCUD_0000101601 Schistosoma curassoni SCUD_0000101601 N 0.000
A_03823 Schistosoma haematobium A_03823 N 0.000
Sjc_0053770 Schistosoma japonicum Sjc_0053770 N 0.000
Smp_008830 Schistosoma mansoni Smp_008830 N 0.000
SMRZ_0002157401 Schistosoma margrebowiei SMRZ_0002157401 N 0.000
SPER_0002845401 Spirometra erinaceieuropaei SPER_0002845401 N 0.000
SPER_0000373001 Spirometra erinaceieuropaei SPER_0000373001 N 0.000
SMAR014171 Strigamia maritima SMAR014171 N 0.000
SPU_016575 Strongylocentrotus purpuratus SPU_016575 N 0.000
TsM_000501300 Taenia solium TsM_000501300 N 0.000
ENSTGUG00000015201 Taeniopygia guttata ENSTGUG00000015201 N 0.000
ENSTSYG00000004240 Tarsius syrichta ENSTSYG00000004240 N 0.000
tetur03g08660 Tetranychus urticae tetur03g08660 N 0.000
ENSVPAG00000010492 Vicugna pacos ENSVPAG00000010492 N 0.000
L798_15354 Zootermopsis nevadensis L798_15354 N 0.000