MTR_5g027440 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_5g027440 T274852_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.851 0.915
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.851 0.915
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.796 0.830
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.796 0.830
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.796 0.830
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.796 0.830
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.796 0.830
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.796 0.830
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.761 0.809
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.714 0.745
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.711 0.809
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.711 0.809
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.711 0.809
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.711 0.809
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.708 0.723
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.708 0.723
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.708 0.723
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.683 0.702
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.683 0.702
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.678 0.723
KAN2
M07018_2.00
Arabidopsis thaliana
HHHNDWATATTCTYH

DRAGAATATWHNDDD
Dap-seq
OMalley et al.(2016)
KAN2_col_a
0.670 0.723
KAN2
M07019_2.00
Arabidopsis thaliana
NWWTATTCYYH

DRRGAATAWWN
Dap-seq
OMalley et al.(2016)
KAN2_colamp_a
0.670 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES95614 Myb 27 78

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

857 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.000
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.000
AAEL011380 Aedes aegypti AAEL011380 N 0.000
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.000
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.000
AALB006743 Anopheles albimanus AALB006743 N 0.000
AARA010318 Anopheles arabiensis AARA010318 N 0.000
AATE018776 Anopheles atroparvus AATE018776 N 0.000
AATE010886 Anopheles atroparvus AATE010886 N 0.000
ACUA021022 Anopheles culicifacies ACUA021022 N 0.000
ADAC001494 Anopheles darlingi ADAC001494 N 0.000
ADIR000367 Anopheles dirus ADIR000367 N 0.000
ADIR011701 Anopheles dirus ADIR011701 N 0.000
AEPI002924 Anopheles epiroticus AEPI002924 N 0.000
AEPI003041 Anopheles epiroticus AEPI003041 N 0.000
AFAF003948 Anopheles farauti AFAF003948 N 0.000
AFUN010134 Anopheles funestus AFUN010134 N 0.000
AGAP000005 Anopheles gambiae AGAP000005 N 0.000
AMAM015540 Anopheles maculatus AMAM015540 N 0.000
AMEC021909 Anopheles melas AMEC021909 N 0.000
AMEM017336 Anopheles merus AMEM017336 N 0.000
AMIN005344 Anopheles minimus AMIN005344 N 0.000
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.000
ASIS009950 Anopheles sinensis ASIS009950 N 0.000
ASIS000124 Anopheles sinensis ASIS000124 N 0.000
ASTEI11547 Anopheles stephensi ASTEI11547 N 0.000
GB47828 Apis mellifera GB47828 N 0.000
ASU_03902 Ascaris suum ASU_03902 N 0.000
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.000
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.000
ACEP16613 Atta cephalotes ACEP16613 N 0.000
BGLB010942 Biomphalaria glabrata BGLB010942 N 0.000
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.000
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.000
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.000
Bm4180 Brugia malayi Bm4180 N 0.000
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N 0.000
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.000
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.000
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.000
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.000
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.000
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.000
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.000
CapteG158220 Capitella teleta CapteG158220 N 0.000
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.000
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.000
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.000
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.000
csin112095 Clonorchis sinensis csin112095 N 0.000
csin110255 Clonorchis sinensis csin110255 N 0.000
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.000
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.000
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.000
hmgb3b Danio rerio ENSDARG00000006408 N 0.000
hmgb1a Danio rerio ENSDARG00000099175 N 0.000
hmgb2a Danio rerio ENSDARG00000029722 N 0.000
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.000
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.000
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.000
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.000
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.000
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.000
GF19115 Drosophila ananassae FBgn0096126 N 0.000
GG17955 Drosophila erecta FBgn0110175 N 0.000
GH12282 Drosophila grimshawi FBgn0119761 N 0.000
Dsp1 Drosophila melanogaster FBgn0011764 N 0.000
GI10980 Drosophila mojavensis FBgn0133743 N 0.000
GL15829 Drosophila persimilis FBgn0153433 N 0.000
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.000
GD17278 Drosophila simulans FBgn0188840 N 0.000
GJ19445 Drosophila virilis FBgn0206588 N 0.000
GK25058 Drosophila willistoni FBgn0227017 N 0.000
GE17263 Drosophila yakuba FBgn0234741 N 0.000
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.000
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.000
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.000
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.000
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.000
D915_00818 Fasciola hepatica D915_00818 N 0.000
D915_15256 Fasciola hepatica D915_15256 N 0.000
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.000
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.000
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.000
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.000
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.000
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.000
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.000
HMEL007340 Heliconius melpomene HMEL007340 N 0.000
HelroG157878 Helobdella robusta HelroG157878 N 0.000
HelroG87827 Helobdella robusta HelroG87827 N 0.000
HelroG157726 Helobdella robusta HelroG157726 N 0.000
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.000
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.000
HDID_0000408601 Hymenolepis diminuta HDID_0000408601 N 0.000
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.000
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.000
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.000
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.000
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.000
ISCW017350 Ixodes scapularis ISCW017350 N 0.000
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.000
LOAG_04936 Loa loa LOAG_04936 N 0.000
LotgiG200052 Lottia gigantea LotgiG200052 N 0.000
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.000
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.000
MCINX009638 Melitaea cinxia MCINX009638 N 0.000
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.000
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.000
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.000
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.000
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.000
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.000
MDOA008812 Musca domestica MDOA008812 N 0.000
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.000
ENSMPUG00000020113 Mustela putorius furo ENSMPUG00000020113 N 0.000
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.000
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.000
ENSMLUG00000028530 Myotis lucifugus ENSMLUG00000028530 N 0.000
NV15664 Nasonia vitripennis NV15664 N 0.000
NECAME_09126 Necator americanus NECAME_09126 N 0.000
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.000
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.000
T265_14643 Opisthorchis viverrini T265_14643 N 0.000
T265_12733 Opisthorchis viverrini T265_12733 N 0.000
T265_10726 Opisthorchis viverrini T265_10726 N 0.000
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.000
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.000
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.000
ENSOCUG00000023449 Oryctolagus cuniculus ENSOCUG00000023449 N 0.000
ENSOCUG00000016030 Oryctolagus cuniculus ENSOCUG00000016030 N 0.000
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.000
ENSOCUG00000027747 Oryctolagus cuniculus ENSOCUG00000027747 N 0.000
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.000
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.000
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.000
ENSOGAG00000031959 Otolemur garnettii ENSOGAG00000031959 N 0.000
ENSOGAG00000032152 Otolemur garnettii ENSOGAG00000032152 N 0.000
ENSOGAG00000029272 Otolemur garnettii ENSOGAG00000029272 N 0.000
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.000
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.000
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.000
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.000
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.000
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.000
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.000
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.000
ENSPANG00000023341 Papio anubis ENSPANG00000023341 N 0.000
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.000
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.000
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.000
PHUM006290 Pediculus humanus PHUM006290 N 0.000
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.000
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.000
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.000
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.000
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.000
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.000
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.000
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.000
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.000
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.000
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.000
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.000
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.000
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.000
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.000
RPRC006379 Rhodnius prolixus RPRC006379 N 0.000
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.000
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.000
SSLN_0001302101 Schistocephalus solidus SSLN_0001302101 N 0.000
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.000
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.000
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.000
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.000
A_05510 Schistosoma haematobium A_05510 N 0.000
A_00070 Schistosoma haematobium A_00070 N 0.000
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.000
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.000
Smp_103530 Schistosoma mansoni Smp_103530 N 0.000
Smp_100090 Schistosoma mansoni Smp_100090 N 0.000
Smp_000980 Schistosoma mansoni Smp_000980 N 0.000
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.000
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.000
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.000
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.000
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.000
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.000
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.000
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.000
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.000
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.000
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.000
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.000
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.000
SINV22586 Solenopsis invicta SINV22586 N 0.000
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.000
L889_g13533 Steinernema feltiae L889_g13533 N 0.000
L893_g5947 Steinernema glaseri L893_g5947 N 0.000
L892_g17551 Steinernema scapterisci L892_g17551 N 0.000
SMAR013695 Strigamia maritima SMAR013695 N 0.000
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.000
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.000
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.000
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.000
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.000
TsM_000115400 Taenia solium TsM_000115400 N 0.000
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.000
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.000
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.000
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.000
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.000
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.000
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.000
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.000
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.000
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.000
D917_01254 Trichinella nativa D917_01254 N 0.000
D917_08189 Trichinella nativa D917_08189 N 0.000
EFV57410 Trichinella spiralis EFV57410 N 0.000
TRE_0000690301 Trichobilharzia regenti TRE_0000690301 N 0.000
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.000
D918_07195 Trichuris suis D918_07195 N 0.000
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.000
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.000
BAA06440 Xenopus laevis BAA06440 N 0.000
AAH73449 Xenopus laevis AAH73449 N 0.000
AAH44009 Xenopus laevis AAH44009 N 0.000
AAC59859 Xenopus laevis AAC59859 N 0.000
AAI68534 Xenopus tropicalis AAI68534 N 0.000
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.000
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.000