OBART03G02370 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART03G02370 T275479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN

NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.727 0.809
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN

NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.706 0.745
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT

ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.706 0.745
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.695 0.787
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.691 0.745
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.681 0.681
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.681 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G02370.1 Myb 22 73

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

481 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CpipJ_CPIJ008326 Culex pipiens CpipJ_CPIJ008326 N 0.000
ACOM041710 Anopheles coluzzii ACOM041710 N 0.000
Ocbimv22037779m.g Octopus bimaculoides Ocbimv22037779m.g N 0.000
Ogr19361 Ophisaurus gracilis Ogr19361 N 0.000
ENSTTRG00000003122 Tursiops truncatus ENSTTRG00000003122 N 0.000
ENSTSYG00000012050 Tarsius syrichta ENSTSYG00000012050 N 0.000
ENSSHAG00000008637 Sarcophilus harrisii ENSSHAG00000008637 N 0.000
ZNF367 Procavia capensis ENSPCAG00000009702 N 0.000
ENSOARG00000008474 Ovis aries ENSOARG00000008474 N 0.000
ZNF367 Loxodonta africana ENSLAFG00000010427 N 0.000
ENSEEUG00000006265 Erinaceus europaeus ENSEEUG00000006265 N 0.000
ZNF367 Canis familiaris ENSCAFG00000001213 N 0.000
CpipJ_CPIJ019709 Culex pipiens CpipJ_CPIJ019709 N 0.000
AMEC013458 Anopheles melas AMEC013458 N 0.000