CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra73031
(
Phytophthora ramorum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Phyra73031
T277861_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra73031
M02332_2.00
Phytophthora ramorum
NDRKTCAGTN
NACTGAMYHN
PBM
Weirauch et al.(2014)
pTH7816
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.661
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02332_2.00
Myb
51
97
PRRWTKEEDDALRTAVENHREKNWKAIAAQVPGRNHTQCLQRWTKVL
M02332_2.00
Myb
103
148
KGHWSPHEDELLRRLVATEQKNWGDVAAKIPGRTSKQCRERWHNHL
M02332_2.00
Myb
154
198
RGAYTPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKSH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra73031
Myb
503
549
PRRWTKEEDDALRTAVENHREKNWKAIAAQVPGRNHTQCLQRWTKVL
Phyra73031
Myb
555
600
KGHWSPHEDELLRRLVATEQKNWGDVAAKIPGRTSKQCRERWHNHL
Phyra73031
Myb
606
650
RGAYTPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKSH
Links
Other
Myb/SANT
family TFs
Other
Phytophthora ramorum
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy