POPTR_0001s21490 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0001s21490 T278190_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s21490.1 Myb 1200 1253
POPTR_0001s21490.2 Myb 1200 1254

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0869s0150 Salix purpurea SapurV1A.0869s0150 N 0.891
evm.TU.supercontig_34.20 Carica papaya evm.TU.supercontig_34.20 N 0.871
MTR_1g053955 Medicago truncatula MTR_1g053955 N 0.802
SapurV1A.0809s0030 Salix purpurea SapurV1A.0809s0030 N 0.790
28842.m000937 Ricinus communis 28842.m000937 N 0.790
POPTR_0003s01670 Populus trichocarpa POPTR_0003s01670 N 0.790
orange1.1g000138m.g Citrus sinensis orange1.1g000138m.g N 0.784
Ciclev10010891m.g Citrus clementina Ciclev10010891m.g N 0.784
Ca_14192 Cicer arietinum Ca_14192 N 0.755
TCM_025077 Theobroma cacao TCM_025077 N 0.755
GLYMA09G17220 Glycine max GLYMA09G17220 N 0.736
Gorai.004G264200 Gossypium raimondii Gorai.004G264200 N 0.732
Lus10002974.g Linum usitatissimum Lus10002974.g N 0.732