Si002704m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si002704m.g T279704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.691 0.696
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.684 0.717
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.684 0.717
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.681 0.674
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.681 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si002704m Myb 23 68

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J28275 Panicum virgatum Pavir.J28275 N 0.862
Pavir.J37379 Panicum virgatum Pavir.J37379 N 0.821
e_gw1.04.00.501.1 Ostreococcus tauri e_gw1.04.00.501.1 N 0.779
MLOC_59912 Hordeum vulgare MLOC_59912 I 0.766
F775_22242 Aegilops tauschii F775_22242 I 0.752
TRIUR3_06252 Triticum urartu TRIUR3_06252 I 0.752
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.751
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.751
LPERR01G03340 Leersia perrieri LPERR01G03340 I 0.738
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.731
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I 0.730
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I 0.730
LPERR05G03900 Leersia perrieri LPERR05G03900 I 0.712
Sb03g005480 Sorghum bicolor Sb03g005480 I 0.711
ONIVA01G04110 Oryza nivara ONIVA01G04110 I 0.699
ORUFI01G03800 Oryza rufipogon ORUFI01G03800 I 0.699
OS01G0156000 Oryza sativa OS01G0156000 I 0.699
ORGLA01G0032300 Oryza glaberrima ORGLA01G0032300 I 0.699
OPUNC01G03310 Oryza punctata OPUNC01G03310 I 0.699
OMERI01G03530 Oryza meridionalis OMERI01G03530 I 0.699
OGLUM01G03980 Oryza glumaepatula OGLUM01G03980 I 0.699
OBART01G03720 Oryza barthii OBART01G03720 I 0.699
BGIOSGA002364 Oryza indica BGIOSGA002364 I 0.699
BRADI1G34840 Brachypodium distachyon BRADI1G34840 I 0.697
gw1.8.161.1 Volvox carteri gw1.8.161.1 I 0.692
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I 0.691
Bo4g006930 Brassica oleracea Bo4g006930 I 0.691
BGIOSGA028019 Oryza indica BGIOSGA028019 I 0.691
Bra004503 Brassica rapa Bra004503 I 0.691
OPUNC08G03280 Oryza punctata OPUNC08G03280 I 0.691
OLONG_000103 Oryza longistaminata OLONG_000103 I 0.691
OMERI08G03470 Oryza meridionalis OMERI08G03470 I 0.691
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I 0.691
OS08G0157600 Oryza sativa OS08G0157600 D 0.691
Eucgr.K02302 Eucalyptus grandis Eucgr.K02302 I 0.691
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I 0.691
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I 0.691
TRIUR3_13396 Triticum urartu TRIUR3_13396 I 0.691
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I 0.691
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I 0.691
Sb07g003870 Sorghum bicolor Sb07g003870 I 0.691
Si014685m.g Setaria italica Si014685m.g I 0.691
mgf021826m Mimulus guttatus mgf021826m I 0.691
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I 0.691
ONIVA08G03410 Oryza nivara ONIVA08G03410 I 0.691
LPERR08G03480 Leersia perrieri LPERR08G03480 I 0.691
Pavir.J34894 Panicum virgatum Pavir.J34894 I 0.691
GRMZM2G014902 Zea mays GRMZM2G014902 I 0.691
F775_26024 Aegilops tauschii F775_26024 I 0.691
GRMZM2G175265 Zea mays GRMZM2G175265 I 0.691
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I 0.691
MLOC_14118 Hordeum vulgare MLOC_14118 I 0.691
OB08G13700 Oryza brachyantha OB08G13700 I 0.691
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I 0.691
Pavir.Ab02717 Panicum virgatum Pavir.Ab02717 I 0.689
GRMZM2G170322 Zea mays GRMZM2G170322 I 0.689
SapurV1A.0074s0170 Salix purpurea SapurV1A.0074s0170 I 0.688
SapurV1A.0202s0430 Salix purpurea SapurV1A.0202s0430 I 0.688
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I 0.688
POPTR_0012s03530 Populus trichocarpa POPTR_0012s03530 I 0.688
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I 0.688
OGLUM05G04280 Oryza glumaepatula OGLUM05G04280 I 0.686
OBART05G04370 Oryza barthii OBART05G04370 I 0.686
OS05G0162800 Oryza sativa OS05G0162800 I 0.686
ONIVA05G04710 Oryza nivara ONIVA05G04710 I 0.686
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I 0.686
OMERI05G04320 Oryza meridionalis OMERI05G04320 I 0.686
CCA1 Arabidopsis lyrata scaffold_403655.1 I 0.684
CCA1 Arabidopsis thaliana AT2G46830 D 0.684
Carubv10022831m.g Capsella rubella Carubv10022831m.g I 0.684
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I 0.684
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I 0.681
Lus10030184.g Linum usitatissimum Lus10030184.g I 0.681
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I 0.681
Cucsa.349800 Cucumis sativus Cucsa.349800 I 0.681
Eucgr.D02651 Eucalyptus grandis Eucgr.D02651 I 0.681
evm.TU.supercontig_1055.1 Carica papaya evm.TU.supercontig_1055.1 I 0.681
SapurV1A.0162s0390 Salix purpurea SapurV1A.0162s0390 I 0.681
PK20866.1 Cannabis sativa PK20866.1 I 0.681
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I 0.681
cassava36126.valid.m1 Manihot esculenta cassava36126.valid.m1 I 0.681
Gorai.007G113900 Gossypium raimondii Gorai.007G113900 I 0.681
SapurV1A.0003s0380 Salix purpurea SapurV1A.0003s0380 I 0.681
Lus10010100.g Linum usitatissimum Lus10010100.g I 0.681
Lus10005134.g Linum usitatissimum Lus10005134.g I 0.681
Carubv10008551m.g Capsella rubella Carubv10008551m.g I 0.681
Gorai.008G132000 Gossypium raimondii Gorai.008G132000 I 0.681
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I 0.681
POPTR_0002s18170 Populus trichocarpa POPTR_0002s18170 I 0.681
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I 0.681
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I 0.681
MTR_7g118330 Medicago truncatula MTR_7g118330 I 0.681
PGSC0003DMG400011294 Solanum tuberosum PGSC0003DMG400011294 I 0.681
PRUPE_ppa001765mg Prunus persica PRUPE_ppa001765mg I 0.681
GSMUA_Achr10G06560_001 Musa acuminata GSMUA_Achr10G06560_001 I 0.681
GLYMA19G45030 Glycine max GLYMA19G45030 I 0.681
LHY Arabidopsis lyrata fgenesh2_kg.1__131__AT1G01060.3 I 0.681
GLYMA03G42260 Glycine max GLYMA03G42260 I 0.681
GLYMA07G05410 Glycine max GLYMA07G05410 I 0.681
GLYMA16G01980 Glycine max GLYMA16G01980 I 0.681
Bra033291 Brassica rapa Bra033291 I 0.681
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I 0.681
Pm028731 Prunus mume Pm028731 I 0.681
Bo5g002760 Brassica oleracea Bo5g002760 I 0.681
Solyc10g005080.2 Solanum lycopersicum Solyc10g005080.2 I 0.681
30076.m004464 Ricinus communis 30076.m004464 I 0.681
VIT_15s0048g02410 Vitis vinifera VIT_15s0048g02410 I 0.681
LHY Arabidopsis thaliana AT1G01060 D 0.681
TCM_005021 Theobroma cacao TCM_005021 I 0.681
Cucsa.112530 Cucumis sativus Cucsa.112530 I 0.680
Cla018914 Citrullus lanatus Cla018914 I 0.680
BRADI2G34670 Brachypodium distachyon BRADI2G34670 I 0.680
POPTR_0015s05430 Populus trichocarpa POPTR_0015s05430 I 0.680
orange1.1g004262m.g Citrus sinensis orange1.1g004262m.g I 0.679
mgf014004m Mimulus guttatus mgf014004m I 0.679
Ciclev10018964m.g Citrus clementina Ciclev10018964m.g I 0.679
chr3.CM0208.410.nd Lotus japonicus chr3.CM0208.410.nd I 0.679
gw1.9.308.1 Chlorella NC64A gw1.9.308.1 I 0.676
CHLREDRAFT_123164 Chlamydomonas reinhardtii CHLREDRAFT_123164 I 0.674
GSMUA_Achr1G06360_001 Musa acuminata GSMUA_Achr1G06360_001 I 0.673
F775_18043 Aegilops tauschii F775_18043 I 0.671
BRADI3G51960 Brachypodium distachyon BRADI3G51960 I 0.671
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I 0.671
LPERR02G22990 Leersia perrieri LPERR02G22990 I 0.671
Si017289m.g Setaria italica Si017289m.g I 0.671
Traes_6BL_2F2381640 Triticum aestivum Traes_6BL_2F2381640 I 0.671
Sb04g031590 Sorghum bicolor Sb04g031590 I 0.671
OPUNC02G25920 Oryza punctata OPUNC02G25920 I 0.671
OB06G35920 Oryza brachyantha OB06G35920 I 0.671
OB02G35470 Oryza brachyantha OB02G35470 I 0.671
CHLREDRAFT_112628 Chlamydomonas reinhardtii CHLREDRAFT_112628 I 0.670
Bo3g001090 Brassica oleracea Bo3g001090 I 0.667
Bostr.25993s0083 Boechera stricta Bostr.25993s0083 I 0.666
Gorai.008G131800 Gossypium raimondii Gorai.008G131800 I 0.663