CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TVAG_120380
(
Trichomonas vaginalis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
TVAG_120380
T282467_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TVAG_119520
M02338_2.00
Trichomonas vaginalis
NNNHRRYNNN
NNNRYYDNNN
PBM
Weirauch et al.(2014)
pTH7886
0.722
0.758
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_120380
Myb
12
58
KIKFTRDEDERLTNIIEKIGTQDWELIAHEMKNRTPRQCRERWINYI
TVAG_120380
Myb
64
107
NGPWTADEDKLLDELYTEFGSRWHKIAEYFPNRSGNCIRNRYKL
Links
Other
Myb/SANT
family TFs
Other
Trichomonas vaginalis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_119520
Trichomonas vaginalis
TVAG_119520
D
0.722
TVAG_385200
Trichomonas vaginalis
TVAG_385200
N
0.693
TVAG_173310
Trichomonas vaginalis
TVAG_173310
N
0.683
TVAG_459370
Trichomonas vaginalis
TVAG_459370
I
0.683
TVAG_373330
Trichomonas vaginalis
TVAG_373330
N
0.671