CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cmyd_10002843
(
Chelonia mydas
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cmyd_10002843
T283348_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mybl1
M00180_2.00
Mus musculus
HAACBGHHN
NDDCVGTTD
PBM
Badis et al.(2009)
Mybl1_1717
0.669
0.742
MYBL1
M03349_2.00
Homo sapiens
BVGTTKAACBGY
RCVGTTMAACBV
SELEX
Jolma et al.(2013)
MYBL1_1
0.669
0.742
MYBL1
M03350_2.00
Homo sapiens
RMVGTTAACGGT
ACCGTTAACBKY
SELEX
Jolma et al.(2013)
MYBL1_2
0.669
0.742
MYBL1
M03351_2.00
Homo sapiens
NHRACCGTTWN
NWAACGGTYDN
SELEX
Jolma et al.(2013)
MYBL1_3
0.669
0.742
MYBL1
M03352_2.00
Homo sapiens
HAACSGHHHHAACBGHC
GDCVGTTDDDDCSGTTD
SELEX
Jolma et al.(2013)
MYBL1_4
0.669
0.742
Mybl1
M09262_2.00
Mus musculus
BBNBYAACBGCCNSB
VSNGGCVGTTRVNVV
Misc
Kulakovskiy et al.(2013)
MYBA_MOUSE.H11MO.0.C
0.669
0.742
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10002843
Myb
11
71
PAWTEREVRDLIAVWGEESGLSELRSSFRNAKTFVKISQGMKDRGHNRDPKQCRVKLKELR
Cmyd_10002843
Myb
113
159
RVKWTRDEDDKLKKLVEQNGTDDWTFIASHLQNRSDFQCQHRWQKVL
Cmyd_10002843
Myb
165
211
KGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHL
Cmyd_10002843
Myb
217
262
KSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Chelonia mydas
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy