e_gw1.141.94.1 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 e_gw1.141.94.1 T284580_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.141.94.1 Myb 13 42

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30005.m001245 Ricinus communis 30005.m001245 N 0.717
BGIOSGA028509 Oryza indica BGIOSGA028509 N 0.731
Bra011042 Brassica rapa Bra011042 N 0.770
Bra034737 Brassica rapa Bra034737 N 0.689
Carubv10012777m.g Capsella rubella Carubv10012777m.g N 0.735
Cla005572 Citrullus lanatus Cla005572 N 0.846
evm.TU.supercontig_817.1 Carica papaya evm.TU.supercontig_817.1 N 0.749
F775_00616 Aegilops tauschii F775_00616 N 0.770
F775_22357 Aegilops tauschii F775_22357 N 0.722
GRMZM2G162409 Zea mays GRMZM2G162409 I 0.819
GSMUA_Achr6G20070_001 Musa acuminata GSMUA_Achr6G20070_001 N 0.718
LjSGA_102149.2 Lotus japonicus LjSGA_102149.2 N 0.749
MLOC_63597 Hordeum vulgare MLOC_63597 I 0.750
OGLUM08G12590 Oryza glumaepatula OGLUM08G12590 I 0.731
OLONG_004372 Oryza longistaminata OLONG_004372 N 0.663
OLONG_004751 Oryza longistaminata OLONG_004751 N 0.671
OMERI02G34900 Oryza meridionalis OMERI02G34900 N 0.809
OPUNC02G34240 Oryza punctata OPUNC02G34240 N 0.809
OPUNC08G10730 Oryza punctata OPUNC08G10730 N 0.731
orange1.1g038008m.g Citrus sinensis orange1.1g038008m.g N 0.731
OS08G0346400 Oryza sativa OS08G0346400 I 0.827
Pavir.Ba02286 Panicum virgatum Pavir.Ba02286 N 0.749
Pavir.Fa01260 Panicum virgatum Pavir.Fa01260 N 0.695
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.749
PGSC0003DMG400009304 Solanum tuberosum PGSC0003DMG400009304 I 0.671
PRUPE_ppa007491m2g Prunus persica PRUPE_ppa007491m2g N 0.749
PRUPE_ppa025217mg Prunus persica PRUPE_ppa025217mg N 0.669
scaffold_603773.1 Arabidopsis lyrata scaffold_603773.1 N 0.742