Bostr.13129s0196 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.13129s0196 T285695_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.661 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.13129s0196.1.p Myb 14 61
Bostr.13129s0196.1.p Myb 67 106
Bostr.13129s0196.2.p Myb 14 36

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB76 Arabidopsis lyrata Al_scaffold_0006_698 I 0.811
AMTR_s00009p00257950 Amborella trichopoda AMTR_s00009p00257950 N 0.712
AMTR_s00057p00069720 Amborella trichopoda AMTR_s00057p00069720 N 0.696
AMTR_s00087p00039380 Amborella trichopoda AMTR_s00087p00039380 N 0.704
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.676
MYB60 Arabidopsis thaliana AT1G08810 D 0.682
MYB3 Arabidopsis thaliana AT1G22640 D 0.695
MYB8 Arabidopsis thaliana AT1G35515 I 0.666
MYB29 Arabidopsis thaliana AT5G07690 I 0.756
MYB76 Arabidopsis thaliana AT5G07700 I 0.828
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.751
MYB111 Arabidopsis thaliana AT5G49330 D 0.661
MYB28 Arabidopsis thaliana AT5G61420 I 0.791
BGIOSGA010548 Oryza indica BGIOSGA010548 N 0.683
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.672
Bo2g161590 Brassica oleracea Bo2g161590 I 0.714
Bo3g004500 Brassica oleracea Bo3g004500 I 0.737
Bo4g198650 Brassica oleracea Bo4g198650 N 0.714
Bo7g098590 Brassica oleracea Bo7g098590 I 0.772
Bo8g104180 Brassica oleracea Bo8g104180 N 0.740
Bo9g014610 Brassica oleracea Bo9g014610 I 0.761
Bo9g175680 Brassica oleracea Bo9g175680 I 0.783
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I 0.756
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.661
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I 0.791
Bra005949 Brassica rapa Bra005949 I 0.741
Bra012961 Brassica rapa Bra012961 I 0.772
Bra024685 Brassica rapa Bra024685 N 0.727
Bra029311 Brassica rapa Bra029311 I 0.707
Bra035929 Brassica rapa Bra035929 I 0.761
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I 0.791
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N 0.811
Cagra.2925s0017 Capsella grandiflora Cagra.2925s0017 I 0.773
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N 0.806
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.671
Carubv10001328m.g Capsella rubella Carubv10001328m.g I 0.773
Carubv10012451m.g Capsella rubella Carubv10012451m.g I 0.674
Carubv10027861m.g Capsella rubella Carubv10027861m.g I 0.791
cassava15703.m1 Manihot esculenta cassava15703.m1 N 0.841
cassava17115.m1 Manihot esculenta cassava17115.m1 I 0.667
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.696
cassava2662.m1 Manihot esculenta cassava2662.m1 N 0.760
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.664
cassava44039.valid.m1 Manihot esculenta cassava44039.valid.m1 I 0.711
cassava45648.m1 Manihot esculenta cassava45648.m1 N 0.819
cassava46146.m1 Manihot esculenta cassava46146.m1 I 0.703
cassava47112.m1 Manihot esculenta cassava47112.m1 I 0.672
Ca_10215 Cicer arietinum Ca_10215 N 0.771
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N 0.801
chr5.CM0071.390.nd Lotus japonicus chr5.CM0071.390.nd N 0.759
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.661
Ciclev10023519m.g Citrus clementina Ciclev10023519m.g N 0.667
Cla013211 Citrullus lanatus Cla013211 I 0.694
CM0385.220.nd Lotus japonicus CM0385.220.nd N 0.819
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.694
Eucgr.B03766 Eucalyptus grandis Eucgr.B03766 N 0.800
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.664
evm.TU.supercontig_1.55 Carica papaya evm.TU.supercontig_1.55 N 0.730
evm.TU.supercontig_34.3 Carica papaya evm.TU.supercontig_34.3 N 0.705
e_gw1.1.4.1 Physcomitrella patens e_gw1.1.4.1 N 0.749
F775_42755 Aegilops tauschii F775_42755 N 0.749
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.671
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I 0.740
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.669
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.674
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.669
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.667
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.723
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.663
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.696
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I 0.696
Gorai.001G239000 Gossypium raimondii Gorai.001G239000 I 0.676
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.781
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.751
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.745
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.704
GSMUA_Achr5G18080_001 Musa acuminata GSMUA_Achr5G18080_001 I 0.665
GSMUA_Achr5G23240_001 Musa acuminata GSMUA_Achr5G23240_001 I 0.669
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I 0.669
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I 0.669
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N 0.820
LjSGA_034303.1 Lotus japonicus LjSGA_034303.1 N 0.819
LjSGA_057038.1 Lotus japonicus LjSGA_057038.1 N 0.823
LjSGA_057664.1 Lotus japonicus LjSGA_057664.1 N 0.802
Lus10019085.g Linum usitatissimum Lus10019085.g I 0.700
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.677
MDP0000119725 Malus domestica MDP0000119725 I 0.666
MDP0000209761 Malus domestica MDP0000209761 I 0.663
MDP0000607330 Malus domestica MDP0000607330 I 0.666
MDP0000879675 Malus domestica MDP0000879675 N 0.672
MDP0000911051 Malus domestica MDP0000911051 N 0.745
mg021480m Mimulus guttatus mg021480m N 0.710
mgf017705m Mimulus guttatus mgf017705m N 0.684
mgf018056m Mimulus guttatus mgf018056m N 0.781
mgf020736m Mimulus guttatus mgf020736m N 0.760
mgf023771m Mimulus guttatus mgf023771m N 0.800
MLOC_12474 Hordeum vulgare MLOC_12474 N 0.674
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.828
MLOC_71332 Hordeum vulgare MLOC_71332 N 0.713
MTR_1g087540 Medicago truncatula MTR_1g087540 N 0.816
OB06G28240 Oryza brachyantha OB06G28240 N 0.800
OBART03G14380 Oryza barthii OBART03G14380 I 0.672
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.672
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.672
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.680
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.661
orange1.1g019307m.g Citrus sinensis orange1.1g019307m.g I 0.682
ORGLA02G0219000 Oryza glaberrima ORGLA02G0219000 N 0.840
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.672
OS04G0517100 Oryza sativa OS04G0517100 N 0.689
OS05G0350900 Oryza sativa OS05G0350900 N 0.724
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N 0.838
Pavir.Eb02286 Panicum virgatum Pavir.Eb02286 N 0.819
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.713
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.661
Pavir.J14839 Panicum virgatum Pavir.J14839 N 0.819
Pavir.J25377 Panicum virgatum Pavir.J25377 N 0.785
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N 0.806
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.690
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N 0.784
PK00358.1 Cannabis sativa PK00358.1 N 0.696
PK21717.1 Cannabis sativa PK21717.1 N 0.781
PK27708.1 Cannabis sativa PK27708.1 I 0.672
Pm000007 Prunus mume Pm000007 N 0.818
Pm015551 Prunus mume Pm015551 N 0.735
Pm025102 Prunus mume Pm025102 I 0.674
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.687
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.828
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.699
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N 0.794
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.669
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.674
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.676
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.696
SapurV1A.0876s0040 Salix purpurea SapurV1A.0876s0040 I 0.676
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I 0.696
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I 0.696
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.661
MYB28 Arabidopsis lyrata scaffold_802785.1 I 0.791
Solyc03g098270.1 Solanum lycopersicum Solyc03g098270.1 N 0.727
TCM_011660 Theobroma cacao TCM_011660 I 0.680
TCM_041010 Theobroma cacao TCM_041010 I 0.800
Thhalv10004407m.g Eutrema salsugineum Thhalv10004407m.g I 0.761
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.661
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I 0.756
Thhalv10021048m.g Eutrema salsugineum Thhalv10021048m.g I 0.668
Traes_3AL_F09C7CA19 Triticum aestivum Traes_3AL_F09C7CA19 N 0.713
Traes_3DL_D9A29948B Triticum aestivum Traes_3DL_D9A29948B N 0.713
Traes_7AS_ADDEF000C Triticum aestivum Traes_7AS_ADDEF000C N 0.818
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N 0.818
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N 0.828
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.666
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.661