CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.13129s0196
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.13129s0196
T285695_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.661
0.667
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.13129s0196.1.p
Myb
14
61
RGAWTTEEDKKLISYIHDHGEGSWRDIPEKAGLQRCGKSCRLRWTNYL
Bostr.13129s0196.1.p
Myb
67
106
RGEFSYEEEQIIIMLHASRGNKHLPKRTDNEVKNYWNTHL
Bostr.13129s0196.2.p
Myb
14
36
VAITRHLPKRTDNEVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
153 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
0.841
ORGLA02G0219000
Oryza glaberrima
ORGLA02G0219000
N
0.840
Pavir.Db00878
Panicum virgatum
Pavir.Db00878
N
0.838
MYB76
Arabidopsis thaliana
AT5G07700
I
0.828
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.828
MLOC_39554
Hordeum vulgare
MLOC_39554
I
0.828
Traes_7DS_76515C538
Triticum aestivum
Traes_7DS_76515C538
N
0.828
LjSGA_057038.1
Lotus japonicus
LjSGA_057038.1
N
0.823
LjSGA_014958.1
Lotus japonicus
LjSGA_014958.1
N
0.820
Pavir.J14839
Panicum virgatum
Pavir.J14839
N
0.819
CM0385.220.nd
Lotus japonicus
CM0385.220.nd
N
0.819
Pavir.Eb02286
Panicum virgatum
Pavir.Eb02286
N
0.819
LjSGA_034303.1
Lotus japonicus
LjSGA_034303.1
N
0.819
cassava45648.m1
Manihot esculenta
cassava45648.m1
N
0.819
Pm000007
Prunus mume
Pm000007
N
0.818
Traes_7AS_FD974A17F
Triticum aestivum
Traes_7AS_FD974A17F
N
0.818
Traes_7AS_ADDEF000C
Triticum aestivum
Traes_7AS_ADDEF000C
N
0.818
MTR_1g087540
Medicago truncatula
MTR_1g087540
N
0.816
MYB76
Arabidopsis lyrata
Al_scaffold_0006_698
I
0.811
Cagra.0876s0043
Capsella grandiflora
Cagra.0876s0043
N
0.811
Cagra.5789s0001
Capsella grandiflora
Cagra.5789s0001
N
0.806
PDK_20s1922781g001
Phoenix dactylifera
PDK_20s1922781g001
N
0.806
LjSGA_057664.1
Lotus japonicus
LjSGA_057664.1
N
0.802
chr1.CM0600.120.nd
Lotus japonicus
chr1.CM0600.120.nd
N
0.801
Eucgr.B03766
Eucalyptus grandis
Eucgr.B03766
N
0.800
TCM_041010
Theobroma cacao
TCM_041010
I
0.800
mgf023771m
Mimulus guttatus
mgf023771m
N
0.800
OB06G28240
Oryza brachyantha
OB06G28240
N
0.800
POPTR_0017s10780
Populus trichocarpa
POPTR_0017s10780
N
0.794
Cagra.0542s0036
Capsella grandiflora
Cagra.0542s0036
I
0.791
MYB28
Arabidopsis thaliana
AT5G61420
I
0.791
MYB28
Arabidopsis lyrata
scaffold_802785.1
I
0.791
Bostr.26833s0098
Boechera stricta
Bostr.26833s0098
I
0.791
Carubv10027861m.g
Capsella rubella
Carubv10027861m.g
I
0.791
Pavir.J25377
Panicum virgatum
Pavir.J25377
N
0.785
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.784
Bo9g175680
Brassica oleracea
Bo9g175680
I
0.783
mgf018056m
Mimulus guttatus
mgf018056m
N
0.781
PK21717.1
Cannabis sativa
PK21717.1
N
0.781
Gorai.008G086400
Gossypium raimondii
Gorai.008G086400
I
0.781
Cagra.2925s0017
Capsella grandiflora
Cagra.2925s0017
I
0.773
Carubv10001328m.g
Capsella rubella
Carubv10001328m.g
I
0.773
Bra012961
Brassica rapa
Bra012961
I
0.772
Bo7g098590
Brassica oleracea
Bo7g098590
I
0.772
Ca_10215
Cicer arietinum
Ca_10215
N
0.771
Bo9g014610
Brassica oleracea
Bo9g014610
I
0.761
Thhalv10004407m.g
Eutrema salsugineum
Thhalv10004407m.g
I
0.761
Bra035929
Brassica rapa
Bra035929
I
0.761
mgf020736m
Mimulus guttatus
mgf020736m
N
0.760
cassava2662.m1
Manihot esculenta
cassava2662.m1
N
0.760
chr5.CM0071.390.nd
Lotus japonicus
chr5.CM0071.390.nd
N
0.759
MYB29
Arabidopsis thaliana
AT5G07690
I
0.756
Thhalv10013952m.g
Eutrema salsugineum
Thhalv10013952m.g
I
0.756
Bostr.13129s0197
Boechera stricta
Bostr.13129s0197
I
0.756
Gorai.012G186500
Gossypium raimondii
Gorai.012G186500
I
0.751
ATMYB16
Arabidopsis thaliana
AT5G15310
I
0.751
e_gw1.1.4.1
Physcomitrella patens
e_gw1.1.4.1
N
0.749
F775_42755
Aegilops tauschii
F775_42755
N
0.749
MDP0000911051
Malus domestica
MDP0000911051
N
0.745
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.745
Bra005949
Brassica rapa
Bra005949
I
0.741
Bo8g104180
Brassica oleracea
Bo8g104180
N
0.740
MYB29
Arabidopsis lyrata
fgenesh2_kg.6__738__AT5G07690.1
I
0.740
Bo3g004500
Brassica oleracea
Bo3g004500
I
0.737
Pm015551
Prunus mume
Pm015551
N
0.735
evm.TU.supercontig_1.55
Carica papaya
evm.TU.supercontig_1.55
N
0.730
Solyc03g098270.1
Solanum lycopersicum
Solyc03g098270.1
N
0.727
Bra024685
Brassica rapa
Bra024685
N
0.727
OS05G0350900
Oryza sativa
OS05G0350900
N
0.724
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.723
Bo2g161590
Brassica oleracea
Bo2g161590
I
0.714
Bo4g198650
Brassica oleracea
Bo4g198650
N
0.714
Traes_3AL_F09C7CA19
Triticum aestivum
Traes_3AL_F09C7CA19
N
0.713
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.713
Traes_3DL_D9A29948B
Triticum aestivum
Traes_3DL_D9A29948B
N
0.713
MLOC_71332
Hordeum vulgare
MLOC_71332
N
0.713
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
0.712
cassava44039.valid.m1
Manihot esculenta
cassava44039.valid.m1
I
0.711
mg021480m
Mimulus guttatus
mg021480m
N
0.710
Bra029311
Brassica rapa
Bra029311
I
0.707
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
0.705
AMTR_s00087p00039380
Amborella trichopoda
AMTR_s00087p00039380
N
0.704
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.704
cassava46146.m1
Manihot esculenta
cassava46146.m1
I
0.703
Lus10019085.g
Linum usitatissimum
Lus10019085.g
I
0.700
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.699
Gorai.001G024300
Gossypium raimondii
Gorai.001G024300
I
0.696
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.696
AMTR_s00057p00069720
Amborella trichopoda
AMTR_s00057p00069720
N
0.696
PK00358.1
Cannabis sativa
PK00358.1
N
0.696
SapurV1A.3377s0010
Salix purpurea
SapurV1A.3377s0010
I
0.696
SapurV1A.0890s0050
Salix purpurea
SapurV1A.0890s0050
I
0.696
GLYMA14G10483
Glycine max
GLYMA14G10483
I
0.696
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.696
MYB3
Arabidopsis thaliana
AT1G22640
D
0.695
Cucsa.318610
Cucumis sativus
Cucsa.318610
I
0.694
Cla013211
Citrullus lanatus
Cla013211
I
0.694
PGSC0003DMG400014550
Solanum tuberosum
PGSC0003DMG400014550
I
0.690
OS04G0517100
Oryza sativa
OS04G0517100
N
0.689
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.687
mgf017705m
Mimulus guttatus
mgf017705m
N
0.684
BGIOSGA010548
Oryza indica
BGIOSGA010548
N
0.683
MYB60
Arabidopsis thaliana
AT1G08810
D
0.682
orange1.1g019307m.g
Citrus sinensis
orange1.1g019307m.g
I
0.682
TCM_011660
Theobroma cacao
TCM_011660
I
0.680
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
0.680
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
0.677
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.676
SapurV1A.0876s0040
Salix purpurea
SapurV1A.0876s0040
I
0.676
Gorai.001G239000
Gossypium raimondii
Gorai.001G239000
I
0.676
Aquca_073_00013
Aquilegia coerulea
Aquca_073_00013
I
0.676
PRUPE_ppa011954mg
Prunus persica
PRUPE_ppa011954mg
I
0.674
Carubv10012451m.g
Capsella rubella
Carubv10012451m.g
I
0.674
gene09406-v1.0-hybrid
Fragaria vesca
gene09406-v1.0-hybrid
I
0.674
Pm025102
Prunus mume
Pm025102
I
0.674
MLOC_12474
Hordeum vulgare
MLOC_12474
N
0.674
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
0.672
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
0.672
OBART03G14380
Oryza barthii
OBART03G14380
I
0.672
PK27708.1
Cannabis sativa
PK27708.1
I
0.672
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
0.672
MDP0000879675
Malus domestica
MDP0000879675
N
0.672
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
0.672
cassava47112.m1
Manihot esculenta
cassava47112.m1
I
0.672
Cagra.9781s0007
Capsella grandiflora
Cagra.9781s0007
I
0.671
HOS10
Arabidopsis lyrata
fgenesh2_kg.1__3635__AT1G35515.1
I
0.671
GSMUA_Achr6G02550_001
Musa acuminata
GSMUA_Achr6G02550_001
I
0.669
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.669
GSMUA_Achr7G18410_001
Musa acuminata
GSMUA_Achr7G18410_001
I
0.669
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.669
GSMUA_Achr5G23240_001
Musa acuminata
GSMUA_Achr5G23240_001
I
0.669
GLYMA0041S00310
Glycine max
GLYMA0041S00310
I
0.669
Thhalv10021048m.g
Eutrema salsugineum
Thhalv10021048m.g
I
0.668
cassava17115.m1
Manihot esculenta
cassava17115.m1
I
0.667
Ciclev10023519m.g
Citrus clementina
Ciclev10023519m.g
N
0.667
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.667
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.666
MYB8
Arabidopsis thaliana
AT1G35515
I
0.666
MDP0000607330
Malus domestica
MDP0000607330
I
0.666
MDP0000119725
Malus domestica
MDP0000119725
I
0.666
GSMUA_Achr5G18080_001
Musa acuminata
GSMUA_Achr5G18080_001
I
0.665
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.664
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.664
MDP0000209761
Malus domestica
MDP0000209761
I
0.663
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.663
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.661
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.661
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.661
MYB111
Arabidopsis thaliana
AT5G49330
D
0.661
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I
0.661
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.661
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.661
Pavir.J00442
Panicum virgatum
Pavir.J00442
I
0.661