CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10036336.g
(
Linum usitatissimum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Lus10036336.g
T288171_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.768
0.860
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.743
0.828
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10036336
Myb
14
61
RGRWTSEEDQILTKYILDNGEGSWRWLPKNAGLKRCGKSCRLRWINYL
Lus10036336
Myb
67
112
RGNISDEEDDVIVKLQSSLGNRWSLIASHLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Linum usitatissimum
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10010273.g
Linum usitatissimum
Lus10010273.g
I
0.824
GRMZM2G022686
Zea mays
GRMZM2G022686
I
0.792
chr5.CM0239.580.nc
Lotus japonicus
chr5.CM0239.580.nc
I
0.792
Si039538m.g
Setaria italica
Si039538m.g
I
0.783
Pavir.Ib01420
Panicum virgatum
Pavir.Ib01420
I
0.783
Cla017646
Citrullus lanatus
Cla017646
I
0.778
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.778
Ca_03498
Cicer arietinum
Ca_03498
I
0.770
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.770
MDP0000607330
Malus domestica
MDP0000607330
I
0.769
MDP0000119725
Malus domestica
MDP0000119725
I
0.769
Sb01g037670
Sorghum bicolor
Sb01g037670
I
0.769
GLYMA02G01740
Glycine max
GLYMA02G01740
I
0.768
PK06182.1
Cannabis sativa
PK06182.1
D
0.768
Bo3g039690
Brassica oleracea
Bo3g039690
I
0.767
Solyc06g009710.2
Solanum lycopersicum
Solyc06g009710.2
I
0.766
Gorai.007G124000
Gossypium raimondii
Gorai.007G124000
I
0.765
Thhalv10001498m.g
Eutrema salsugineum
Thhalv10001498m.g
I
0.763
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.763
Bra000453
Brassica rapa
Bra000453
I
0.763
Bostr.25993s0011
Boechera stricta
Bostr.25993s0011
I
0.763
Ciclev10005376m.g
Citrus clementina
Ciclev10005376m.g
I
0.762
orange1.1g041081m.g
Citrus sinensis
orange1.1g041081m.g
I
0.762
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.762
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.762
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.762
MLOC_57220
Hordeum vulgare
MLOC_57220
I
0.762
F775_11235
Aegilops tauschii
F775_11235
I
0.762
OBART03G14380
Oryza barthii
OBART03G14380
I
0.759
LPERR03G12690
Leersia perrieri
LPERR03G12690
I
0.759
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
0.759
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
0.759
MYB12
Arabidopsis thaliana
AT2G47460
I
0.759
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
0.759
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.759
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
0.759
MYB12
Arabidopsis lyrata
fgenesh2_kg.4__2983__AT2G47460.1
I
0.759
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.758
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.758
PGSC0003DMG400007304
Solanum tuberosum
PGSC0003DMG400007304
I
0.757
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.754
Carubv10019345m.g
Capsella rubella
Carubv10019345m.g
I
0.753
Cagra.13170s0007
Capsella grandiflora
Cagra.13170s0007
I
0.753
Bostr.13158s0261
Boechera stricta
Bostr.13158s0261
I
0.753
Cucsa.252700
Cucumis sativus
Cucsa.252700
I
0.752
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.752
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.751
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.749
Thhalv10006080m.g
Eutrema salsugineum
Thhalv10006080m.g
I
0.748
ATMYB11
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002710
I
0.748
PRUPE_ppa007594mg
Prunus persica
PRUPE_ppa007594mg
I
0.748
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.748
Solyc01g079620.2
Solanum lycopersicum
Solyc01g079620.2
I
0.747
PGSC0003DMG400009033
Solanum tuberosum
PGSC0003DMG400009033
I
0.747
BRADI1G64687
Brachypodium distachyon
BRADI1G64687
I
0.746
Cla022107
Citrullus lanatus
Cla022107
I
0.746
BRADI2G11676
Brachypodium distachyon
BRADI2G11676
I
0.746
Eucgr.H01058
Eucalyptus grandis
Eucgr.H01058
I
0.745
GSMUA_AchrUn_randomG12700_001
Musa acuminata
GSMUA_AchrUn_randomG12700_001
I
0.744
gene05167-v1.0-hybrid
Fragaria vesca
gene05167-v1.0-hybrid
I
0.743
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.743
GRMZM2G084799
Zea mays
GRMZM2G084799
I
0.743
MYB111
Arabidopsis thaliana
AT5G49330
D
0.743
Bra037419
Brassica rapa
Bra037419
I
0.743
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.743
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.743
GRMZM2G057027
Zea mays
GRMZM2G057027
I
0.743
Bo7g092680
Brassica oleracea
Bo7g092680
I
0.743
TCM_004777
Theobroma cacao
TCM_004777
I
0.742
cassava40469.m1
Manihot esculenta
cassava40469.m1
I
0.741
GLYMA17G03480
Glycine max
GLYMA17G03480
I
0.741
MTR_4g121460
Medicago truncatula
MTR_4g121460
I
0.741
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.740
MTR_7g109320
Medicago truncatula
MTR_7g109320
I
0.740
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.739
Pm008294
Prunus mume
Pm008294
I
0.736
MTR_2g034790
Medicago truncatula
MTR_2g034790
I
0.736
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.736
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.735
Si002107m.g
Setaria italica
Si002107m.g
I
0.735
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
0.734
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.734
TCM_021318
Theobroma cacao
TCM_021318
I
0.734
GLYMA07G37142
Glycine max
GLYMA07G37142
I
0.734
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.733
GSMUA_Achr5G21250_001
Musa acuminata
GSMUA_Achr5G21250_001
I
0.732
Gorai.008G141000
Gossypium raimondii
Gorai.008G141000
I
0.732
Bo4g004500
Brassica oleracea
Bo4g004500
I
0.731
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.731
Aquca_003_00583
Aquilegia coerulea
Aquca_003_00583
I
0.728
Bra036145
Brassica rapa
Bra036145
I
0.727
PK16958.1
Cannabis sativa
PK16958.1
I
0.726
GLYMA15G15400
Glycine max
GLYMA15G15400
I
0.725
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.724
Pm020104
Prunus mume
Pm020104
I
0.723
Cla009418
Citrullus lanatus
Cla009418
I
0.721
Cucsa.069500
Cucumis sativus
Cucsa.069500
I
0.721
GLYMA19G40250
Glycine max
GLYMA19G40250
I
0.720
GRMZM2G051256
Zea mays
GRMZM2G051256
I
0.719
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.719
VIT_05s0077g01360
Vitis vinifera
VIT_05s0077g01360
I
0.718
PGSC0003DMG400004371
Solanum tuberosum
PGSC0003DMG400004371
I
0.715
PDK_20s1388491g004
Phoenix dactylifera
PDK_20s1388491g004
I
0.715
OGLUM03G14490
Oryza glumaepatula
OGLUM03G14490
I
0.711
OB03G24320
Oryza brachyantha
OB03G24320
I
0.711
TRIUR3_05136
Triticum urartu
TRIUR3_05136
I
0.711
ORGLA03G0138900
Oryza glaberrima
ORGLA03G0138900
I
0.711
Traes_1DS_711044AD5
Triticum aestivum
Traes_1DS_711044AD5
I
0.709
Gorai.011G195100
Gossypium raimondii
Gorai.011G195100
I
0.708
Solyc12g049350.1
Solanum lycopersicum
Solyc12g049350.1
I
0.706
Lus10002435.g
Linum usitatissimum
Lus10002435.g
I
0.705
MYB11
Arabidopsis thaliana
AT3G62610
I
0.703
POPTR_0010s15090
Populus trichocarpa
POPTR_0010s15090
I
0.701
SapurV1A.0050s0720
Salix purpurea
SapurV1A.0050s0720
I
0.701
Eucgr.A00200
Eucalyptus grandis
Eucgr.A00200
I
0.697
Bo3g044210
Brassica oleracea
Bo3g044210
I
0.697
Bra000680
Brassica rapa
Bra000680
I
0.697
mgf024278m
Mimulus guttatus
mgf024278m
I
0.694
TCM_037555
Theobroma cacao
TCM_037555
I
0.693
Aquca_028_00141
Aquilegia coerulea
Aquca_028_00141
I
0.690
TCM_021317
Theobroma cacao
TCM_021317
I
0.687
evm.TU.supercontig_9.95
Carica papaya
evm.TU.supercontig_9.95
I
0.685
Lus10016855.g
Linum usitatissimum
Lus10016855.g
I
0.684
Lus10036453.g
Linum usitatissimum
Lus10036453.g
I
0.684
F775_18434
Aegilops tauschii
F775_18434
I
0.684
OGLUM01G14390
Oryza glumaepatula
OGLUM01G14390
I
0.682
OS01G0305900
Oryza sativa
OS01G0305900
I
0.682
ORUFI01G13920
Oryza rufipogon
ORUFI01G13920
I
0.682
BGIOSGA003345
Oryza indica
BGIOSGA003345
I
0.682
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.681
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.681
Pavir.Db02046
Panicum virgatum
Pavir.Db02046
I
0.681
Lus10001458.g
Linum usitatissimum
Lus10001458.g
I
0.678
Bostr.13129s0196
Boechera stricta
Bostr.13129s0196
I
0.677
evm.TU.supercontig_18.11
Carica papaya
evm.TU.supercontig_18.11
I
0.676
HOS10
Arabidopsis lyrata
fgenesh2_kg.1__3635__AT1G35515.1
I
0.675
OB01G22640
Oryza brachyantha
OB01G22640
I
0.672
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I
0.672
Cagra.9781s0007
Capsella grandiflora
Cagra.9781s0007
I
0.671
MYB8
Arabidopsis thaliana
AT1G35515
I
0.671
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.671
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.668
Aquca_073_00013
Aquilegia coerulea
Aquca_073_00013
I
0.668
Cucsa.096800
Cucumis sativus
Cucsa.096800
I
0.668
Carubv10012451m.g
Capsella rubella
Carubv10012451m.g
I
0.668
TCM_010778
Theobroma cacao
TCM_010778
I
0.667
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.666
Pavir.J00442
Panicum virgatum
Pavir.J00442
I
0.664
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.663
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I
0.663
TCM_037379
Theobroma cacao
TCM_037379
I
0.662
mgf012733m
Mimulus guttatus
mgf012733m
I
0.661
Ciclev10023756m.g
Citrus clementina
Ciclev10023756m.g
I
0.661
orange1.1g046093m.g
Citrus sinensis
orange1.1g046093m.g
I
0.661