PK16958.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK16958.1 T290427_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.797 0.860
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.758 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK16958.1 Myb 22 69
PK16958.1 Myb 75 120

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.833
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.824
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.810
Bra037419 Brassica rapa Bra037419 I 0.805
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.805
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.805
Bo7g092680 Brassica oleracea Bo7g092680 I 0.805
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.805
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.798
Pm008294 Prunus mume Pm008294 I 0.798
MYB111 Arabidopsis thaliana AT5G49330 D 0.797
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.792
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.791
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.789
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.785
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.785
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.785
TCM_021318 Theobroma cacao TCM_021318 I 0.785
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.782
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.781
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.780
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.779
Cla009418 Citrullus lanatus Cla009418 I 0.778
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.778
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.775
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.773
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.772
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.771
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.770
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.770
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.770
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.767
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.767
Bra036145 Brassica rapa Bra036145 I 0.766
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.764
MDP0000607330 Malus domestica MDP0000607330 I 0.763
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.763
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.763
MDP0000119725 Malus domestica MDP0000119725 I 0.763
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.762
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.761
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.761
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.761
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.758
PK06182.1 Cannabis sativa PK06182.1 D 0.758
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.757
Bra000453 Brassica rapa Bra000453 I 0.756
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.756
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.756
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.756
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.756
MYB12 Arabidopsis thaliana AT2G47460 I 0.756
Cla017646 Citrullus lanatus Cla017646 I 0.755
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.755
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.755
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.755
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.754
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.754
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.753
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.753
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.753
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.753
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.753
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.753
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.752
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.752
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.752
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.752
TCM_004777 Theobroma cacao TCM_004777 I 0.750
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.750
Ca_03498 Cicer arietinum Ca_03498 I 0.750
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.748
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.747
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.747
Si002107m.g Setaria italica Si002107m.g I 0.747
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.747
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.747
Bo3g039690 Brassica oleracea Bo3g039690 I 0.747
F775_11235 Aegilops tauschii F775_11235 I 0.747
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.747
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.744
Si039538m.g Setaria italica Si039538m.g I 0.744
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.744
TCM_021317 Theobroma cacao TCM_021317 I 0.744
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.744
Cla022107 Citrullus lanatus Cla022107 I 0.744
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.743
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.741
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.739
mgf024278m Mimulus guttatus mgf024278m I 0.738
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.736
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.736
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.736
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.732
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.732
Pm020104 Prunus mume Pm020104 I 0.729
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.729
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.727
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.727
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.727
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.727
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.727
OBART03G14380 Oryza barthii OBART03G14380 I 0.727
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.727
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.726
F775_18434 Aegilops tauschii F775_18434 I 0.724
Bo4g004500 Brassica oleracea Bo4g004500 I 0.723
mgf003233m Mimulus guttatus mgf003233m I 0.722
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.719
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.718
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.716
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.714
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.713
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.713
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.711
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.706
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.699
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.699
MYB11 Arabidopsis thaliana AT3G62610 I 0.699
TCM_014091 Theobroma cacao TCM_014091 I 0.699
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.697
OB03G24320 Oryza brachyantha OB03G24320 I 0.696
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.695
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.692
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.692
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.691
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.690
TCM_037555 Theobroma cacao TCM_037555 I 0.689
Eucgr.E01031 Eucalyptus grandis Eucgr.E01031 I 0.689
OB02G39890 Oryza brachyantha OB02G39890 I 0.687
mgf012733m Mimulus guttatus mgf012733m I 0.685
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.685
Bra000680 Brassica rapa Bra000680 I 0.683
Bo3g044210 Brassica oleracea Bo3g044210 I 0.683
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.683
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.682
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.682
MYB8 Arabidopsis thaliana AT1G35515 I 0.681
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.680
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.680
Gorai.009G263200 Gossypium raimondii Gorai.009G263200 I 0.680
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.680
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.680
OS01G0305900 Oryza sativa OS01G0305900 I 0.679
PK05970.1 Cannabis sativa PK05970.1 I 0.679
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.679
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.679
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.679
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.679
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.679
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.679
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.678
Pm027047 Prunus mume Pm027047 I 0.678
OB01G22640 Oryza brachyantha OB01G22640 I 0.678
MDP0000159011 Malus domestica MDP0000159011 I 0.678
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.678
Carubv10012451m.g Capsella rubella Carubv10012451m.g I 0.678
GSMUA_AchrUn_randomG15560_001 Musa acuminata GSMUA_AchrUn_randomG15560_001 I 0.677
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.676
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.675
MDP0000140609 Malus domestica MDP0000140609 I 0.675
MYB7 Vitis vinifera VIT_07s0130g00040 I 0.674
Pavir.J35999 Panicum virgatum Pavir.J35999 I 0.673
Pm027048 Prunus mume Pm027048 I 0.673
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.673
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.673
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.673
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.673
Gorai.008G179600 Gossypium raimondii Gorai.008G179600 I 0.672
TCM_037379 Theobroma cacao TCM_037379 I 0.670
F775_21522 Aegilops tauschii F775_21522 I 0.670
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.669
VIT_14s0006g01620 Vitis vinifera VIT_14s0006g01620 I 0.669
POPTR_0004s08650 Populus trichocarpa POPTR_0004s08650 I 0.669
TCM_019261 Theobroma cacao TCM_019261 I 0.669
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.668
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.668
TT2 Arabidopsis thaliana AT5G35550 I 0.668
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.668
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.668
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.668
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.668
Bostr.25219s0339 Boechera stricta Bostr.25219s0339 I 0.667
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.667
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.667
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.667
Solyc05g007710.2 Solanum lycopersicum Solyc05g007710.2 I 0.667
GLYMA10G38090 Glycine max GLYMA10G38090 I 0.667
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.666
MDP0000887107 Malus domestica MDP0000887107 I 0.666
Pm005572 Prunus mume Pm005572 I 0.666
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.666
GLYMA20G29730 Glycine max GLYMA20G29730 I 0.666
Solyc01g111500.2 Solanum lycopersicum Solyc01g111500.2 I 0.665
OB03G30160 Oryza brachyantha OB03G30160 I 0.665
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I 0.665
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.665
POPTR_0004s18020 Populus trichocarpa POPTR_0004s18020 I 0.665
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I 0.664
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I 0.664
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I 0.664
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.664
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.663
Pm025102 Prunus mume Pm025102 I 0.663
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.663
Cla011528 Citrullus lanatus Cla011528 I 0.662
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.662
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.662
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.662
GSMUA_Achr2G02970_001 Musa acuminata GSMUA_Achr2G02970_001 I 0.661
cassava3811.m1 Manihot esculenta cassava3811.m1 I 0.661
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.661
Lus10036453.g Linum usitatissimum Lus10036453.g I 0.661
SapurV1A.2094s0030 Salix purpurea SapurV1A.2094s0030 I 0.661