CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10001458.g
(
Linum usitatissimum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Lus10001458.g
T287853_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.688
0.720
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.685
0.753
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10001458
Myb
14
61
KGRWSAEEDQLLADYIVANGEGSWKSLPQNAGLKRCGKSCRLRWVNYL
Lus10001458
Myb
67
112
RGNISTAEAETILNLHTCLGNRWSTIASQLSGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Linum usitatissimum
TFs
132 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10002435.g
Linum usitatissimum
Lus10002435.g
I
0.872
PDK_20s1388491g004
Phoenix dactylifera
PDK_20s1388491g004
I
0.783
POPTR_0010s15090
Populus trichocarpa
POPTR_0010s15090
I
0.777
orange1.1g041081m.g
Citrus sinensis
orange1.1g041081m.g
I
0.771
Ciclev10005376m.g
Citrus clementina
Ciclev10005376m.g
I
0.771
SapurV1A.0050s0720
Salix purpurea
SapurV1A.0050s0720
I
0.767
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.766
cassava40469.m1
Manihot esculenta
cassava40469.m1
I
0.762
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.761
GLYMA02G01740
Glycine max
GLYMA02G01740
I
0.756
Cucsa.069500
Cucumis sativus
Cucsa.069500
I
0.754
Gorai.011G195100
Gossypium raimondii
Gorai.011G195100
I
0.752
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.750
Cla017646
Citrullus lanatus
Cla017646
I
0.749
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.746
chr5.CM0239.580.nc
Lotus japonicus
chr5.CM0239.580.nc
I
0.746
Carubv10019345m.g
Capsella rubella
Carubv10019345m.g
I
0.743
Cagra.13170s0007
Capsella grandiflora
Cagra.13170s0007
I
0.743
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.741
PK16958.1
Cannabis sativa
PK16958.1
I
0.741
MDP0000607330
Malus domestica
MDP0000607330
I
0.741
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.741
MDP0000119725
Malus domestica
MDP0000119725
I
0.741
TCM_021318
Theobroma cacao
TCM_021318
I
0.740
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.737
Aquca_003_00583
Aquilegia coerulea
Aquca_003_00583
I
0.737
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.737
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.737
Cucsa.252700
Cucumis sativus
Cucsa.252700
I
0.735
GSMUA_Achr5G21250_001
Musa acuminata
GSMUA_Achr5G21250_001
I
0.732
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.731
gene05167-v1.0-hybrid
Fragaria vesca
gene05167-v1.0-hybrid
I
0.730
GSMUA_AchrUn_randomG12700_001
Musa acuminata
GSMUA_AchrUn_randomG12700_001
I
0.728
GRMZM2G084799
Zea mays
GRMZM2G084799
I
0.728
GRMZM2G057027
Zea mays
GRMZM2G057027
I
0.728
Thhalv10006080m.g
Eutrema salsugineum
Thhalv10006080m.g
I
0.726
TCM_004777
Theobroma cacao
TCM_004777
I
0.724
Cla009418
Citrullus lanatus
Cla009418
I
0.724
Pm008294
Prunus mume
Pm008294
I
0.721
mgf024278m
Mimulus guttatus
mgf024278m
I
0.721
PRUPE_ppa007594mg
Prunus persica
PRUPE_ppa007594mg
I
0.721
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.720
Cla022107
Citrullus lanatus
Cla022107
I
0.718
Bostr.13158s0261
Boechera stricta
Bostr.13158s0261
I
0.717
ATMYB11
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002710
I
0.717
PGSC0003DMG400009033
Solanum tuberosum
PGSC0003DMG400009033
I
0.716
Solyc01g079620.2
Solanum lycopersicum
Solyc01g079620.2
I
0.716
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.715
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.714
GLYMA15G15400
Glycine max
GLYMA15G15400
I
0.714
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.713
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.712
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.712
Bra037419
Brassica rapa
Bra037419
I
0.712
Bo7g092680
Brassica oleracea
Bo7g092680
I
0.712
Bostr.25993s0011
Boechera stricta
Bostr.25993s0011
I
0.711
Thhalv10001498m.g
Eutrema salsugineum
Thhalv10001498m.g
I
0.711
Bra000453
Brassica rapa
Bra000453
I
0.711
Ca_03498
Cicer arietinum
Ca_03498
I
0.708
MYB12
Arabidopsis lyrata
fgenesh2_kg.4__2983__AT2G47460.1
I
0.707
MTR_4g121460
Medicago truncatula
MTR_4g121460
I
0.707
MYB12
Arabidopsis thaliana
AT2G47460
I
0.707
GLYMA17G03480
Glycine max
GLYMA17G03480
I
0.707
GLYMA07G37142
Glycine max
GLYMA07G37142
I
0.707
mgf003233m
Mimulus guttatus
mgf003233m
I
0.706
Gorai.008G141000
Gossypium raimondii
Gorai.008G141000
I
0.706
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.706
Gorai.007G124000
Gossypium raimondii
Gorai.007G124000
I
0.704
Bra036145
Brassica rapa
Bra036145
I
0.703
TCM_021317
Theobroma cacao
TCM_021317
I
0.703
MTR_2g034790
Medicago truncatula
MTR_2g034790
I
0.702
Eucgr.H01058
Eucalyptus grandis
Eucgr.H01058
I
0.702
Sb01g037670
Sorghum bicolor
Sb01g037670
I
0.702
Bo4g004500
Brassica oleracea
Bo4g004500
I
0.701
MTR_7g109320
Medicago truncatula
MTR_7g109320
I
0.700
VIT_05s0077g01360
Vitis vinifera
VIT_05s0077g01360
I
0.699
SELMODRAFT_450007
Selaginella moellendorffii
SELMODRAFT_450007
I
0.697
Traes_1DS_711044AD5
Triticum aestivum
Traes_1DS_711044AD5
I
0.697
SELMODRAFT_120788
Selaginella moellendorffii
SELMODRAFT_120788
I
0.697
Bo3g039690
Brassica oleracea
Bo3g039690
I
0.697
evm.TU.supercontig_18.11
Carica papaya
evm.TU.supercontig_18.11
I
0.697
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.695
Pavir.Ib01420
Panicum virgatum
Pavir.Ib01420
I
0.695
F775_11235
Aegilops tauschii
F775_11235
I
0.695
LPERR03G12690
Leersia perrieri
LPERR03G12690
I
0.695
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.695
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.695
Si039538m.g
Setaria italica
Si039538m.g
I
0.695
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
0.695
MLOC_57220
Hordeum vulgare
MLOC_57220
I
0.695
Ciclev10023756m.g
Citrus clementina
Ciclev10023756m.g
I
0.694
orange1.1g046093m.g
Citrus sinensis
orange1.1g046093m.g
I
0.694
Lus10016855.g
Linum usitatissimum
Lus10016855.g
I
0.693
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.693
TCM_037555
Theobroma cacao
TCM_037555
I
0.691
GLYMA19G40250
Glycine max
GLYMA19G40250
I
0.690
Solyc06g009710.2
Solanum lycopersicum
Solyc06g009710.2
I
0.690
Si002107m.g
Setaria italica
Si002107m.g
I
0.690
MYB111
Arabidopsis thaliana
AT5G49330
D
0.688
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.688
GRMZM2G022686
Zea mays
GRMZM2G022686
I
0.687
PK06182.1
Cannabis sativa
PK06182.1
D
0.685
GRMZM2G051256
Zea mays
GRMZM2G051256
I
0.684
mgf012733m
Mimulus guttatus
mgf012733m
I
0.684
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.682
BRADI2G11676
Brachypodium distachyon
BRADI2G11676
I
0.682
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.681
GRMZM2G160838
Zea mays
GRMZM2G160838
I
0.681
PGSC0003DMG400007304
Solanum tuberosum
PGSC0003DMG400007304
I
0.681
Solyc12g049350.1
Solanum lycopersicum
Solyc12g049350.1
I
0.680
PGSC0003DMG400004371
Solanum tuberosum
PGSC0003DMG400004371
I
0.680
PGSC0003DMG401023433
Solanum tuberosum
PGSC0003DMG401023433
I
0.680
BRADI1G64687
Brachypodium distachyon
BRADI1G64687
I
0.679
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.679
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
0.678
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
0.677
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
0.677
OBART03G14380
Oryza barthii
OBART03G14380
I
0.677
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
0.677
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.677
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
0.677
F775_18434
Aegilops tauschii
F775_18434
I
0.673
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.670
30068.m002544
Ricinus communis
30068.m002544
I
0.670
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.667
Aquca_028_00141
Aquilegia coerulea
Aquca_028_00141
I
0.667
Pm020104
Prunus mume
Pm020104
I
0.665
Pavir.Ca00231
Panicum virgatum
Pavir.Ca00231
I
0.665
Pavir.J00444
Panicum virgatum
Pavir.J00444
I
0.665
Pavir.J00442
Panicum virgatum
Pavir.J00442
I
0.665
MYB11
Arabidopsis thaliana
AT3G62610
I
0.663
Eucgr.A00200
Eucalyptus grandis
Eucgr.A00200
I
0.662