Gorai.008G141000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.008G141000 T287671_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.795 0.882
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.754 0.860
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G141000.1 Myb 14 61
Gorai.008G141000.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_004777 Theobroma cacao TCM_004777 I 0.821
Cla009418 Citrullus lanatus Cla009418 I 0.817
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.806
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.806
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.803
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.800
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.798
Si002107m.g Setaria italica Si002107m.g I 0.797
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.797
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.796
PK06182.1 Cannabis sativa PK06182.1 D 0.795
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.795
Bra037419 Brassica rapa Bra037419 I 0.795
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.795
Bo7g092680 Brassica oleracea Bo7g092680 I 0.795
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.795
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.789
Pm008294 Prunus mume Pm008294 I 0.789
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.788
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.788
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.786
TCM_021317 Theobroma cacao TCM_021317 I 0.783
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.782
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.782
Si039538m.g Setaria italica Si039538m.g I 0.782
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.781
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.778
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.778
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.778
F775_11235 Aegilops tauschii F775_11235 I 0.776
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.776
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.776
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.776
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.776
Bra000453 Brassica rapa Bra000453 I 0.775
TCM_021318 Theobroma cacao TCM_021318 I 0.775
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.775
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.775
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.774
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.773
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.772
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.771
MYB12 Arabidopsis thaliana AT2G47460 I 0.771
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.771
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.770
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.770
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.769
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.769
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.768
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.768
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.768
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.767
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.767
Bo3g039690 Brassica oleracea Bo3g039690 I 0.766
Cla022107 Citrullus lanatus Cla022107 I 0.765
PK16958.1 Cannabis sativa PK16958.1 I 0.764
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.764
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.764
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.764
Bra036145 Brassica rapa Bra036145 I 0.762
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.762
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.762
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.761
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.761
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.760
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.759
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.758
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.758
Ca_03498 Cicer arietinum Ca_03498 I 0.758
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.758
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.758
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.757
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.757
OBART03G14380 Oryza barthii OBART03G14380 I 0.757
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.757
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.757
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.757
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.757
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.757
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.755
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.754
MYB111 Arabidopsis thaliana AT5G49330 D 0.754
MDP0000607330 Malus domestica MDP0000607330 I 0.753
MDP0000119725 Malus domestica MDP0000119725 I 0.753
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.752
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.752
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.749
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.749
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.749
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.748
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.748
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.747
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.747
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.746
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.744
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.743
Bo4g004500 Brassica oleracea Bo4g004500 I 0.742
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.741
PGSC0003DMG401023433 Solanum tuberosum PGSC0003DMG401023433 I 0.740
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.738
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.736
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.736
mgf003233m Mimulus guttatus mgf003233m I 0.735
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.734
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.733
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.732
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.730
Cla017646 Citrullus lanatus Cla017646 I 0.729
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.729
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.727
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.723
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.723
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.721
mgf024278m Mimulus guttatus mgf024278m I 0.721
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.720
mgf012733m Mimulus guttatus mgf012733m I 0.715
TCM_037555 Theobroma cacao TCM_037555 I 0.714
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.709
OB03G24320 Oryza brachyantha OB03G24320 I 0.709
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.709
Pm020104 Prunus mume Pm020104 I 0.706
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.706
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.705
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.705
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.705
OS01G0305900 Oryza sativa OS01G0305900 I 0.705
OB01G22640 Oryza brachyantha OB01G22640 I 0.704
MYB11 Arabidopsis thaliana AT3G62610 I 0.703
Gorai.009G263200 Gossypium raimondii Gorai.009G263200 I 0.701
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.700
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.700
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.699
F775_21522 Aegilops tauschii F775_21522 I 0.699
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.696
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.696
F775_18434 Aegilops tauschii F775_18434 I 0.694
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.689
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.686
Lus10027459.g Linum usitatissimum Lus10027459.g I 0.684
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.683
Lus10039214.g Linum usitatissimum Lus10039214.g I 0.682
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.678
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.677
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.677
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.677
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.676
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.676
Cla011528 Citrullus lanatus Cla011528 I 0.674
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.673
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.673
Bo3g044210 Brassica oleracea Bo3g044210 I 0.673
Bra000680 Brassica rapa Bra000680 I 0.673
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.672
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.672
MYB8 Arabidopsis thaliana AT1G35515 I 0.672
Pm025102 Prunus mume Pm025102 I 0.672
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.671
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.669
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.669
Aquca_013_00356 Aquilegia coerulea Aquca_013_00356 I 0.669
Carubv10012451m.g Capsella rubella Carubv10012451m.g I 0.669
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.669
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.668
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.668
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.668
cassava34465.m1 Manihot esculenta cassava34465.m1 I 0.667
MDP0000209761 Malus domestica MDP0000209761 I 0.667
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.667
cassava26282.m1 Manihot esculenta cassava26282.m1 I 0.666
Cla012721 Citrullus lanatus Cla012721 I 0.665
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.665
POPTR_0013s11360 Populus trichocarpa POPTR_0013s11360 I 0.665
cassava35464.valid.m1 Manihot esculenta cassava35464.valid.m1 I 0.665
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.665
TCM_036404 Theobroma cacao TCM_036404 I 0.665
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.665
SapurV1A.0277s0120 Salix purpurea SapurV1A.0277s0120 I 0.665
Pm004199 Prunus mume Pm004199 I 0.665
PK16315.1 Cannabis sativa PK16315.1 I 0.665
cassava16245.m1 Manihot esculenta cassava16245.m1 I 0.665
POPTR_0019s11090 Populus trichocarpa POPTR_0019s11090 I 0.665
Pm013279 Prunus mume Pm013279 I 0.665
SapurV1A.1985s0010 Salix purpurea SapurV1A.1985s0010 I 0.665
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.664
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I 0.664
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I 0.664
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.664
Gorai.003G054100 Gossypium raimondii Gorai.003G054100 I 0.663
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.663
GSMUA_AchrUn_randomG15560_001 Musa acuminata GSMUA_AchrUn_randomG15560_001 I 0.663
evm.TU.supercontig_36.134 Carica papaya evm.TU.supercontig_36.134 I 0.663
GSMUA_Achr5G26000_001 Musa acuminata GSMUA_Achr5G26000_001 I 0.663
MDP0000298505 Malus domestica MDP0000298505 I 0.663
TCM_025488 Theobroma cacao TCM_025488 I 0.663
MDP0000136874 Malus domestica MDP0000136874 I 0.663
TCM_037377 Theobroma cacao TCM_037377 I 0.662
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.661
GSMUA_Achr2G20600_001 Musa acuminata GSMUA_Achr2G20600_001 I 0.661