Bo4g004500 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo4g004500 T267297_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.773 0.839
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.740 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g004500.1 Myb 14 61
Bo4g004500.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.876
MYB12 Arabidopsis thaliana AT2G47460 I 0.872
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.872
Bo3g039690 Brassica oleracea Bo3g039690 I 0.862
Bra000453 Brassica rapa Bra000453 I 0.859
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.853
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.852
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.844
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.840
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.832
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.809
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.809
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.803
F775_11235 Aegilops tauschii F775_11235 I 0.798
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.798
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.798
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.798
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.798
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.786
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.786
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.783
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.781
TCM_004777 Theobroma cacao TCM_004777 I 0.777
PK06182.1 Cannabis sativa PK06182.1 D 0.773
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.771
Si039538m.g Setaria italica Si039538m.g I 0.771
Cla009418 Citrullus lanatus Cla009418 I 0.769
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.769
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.768
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.763
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.763
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.760
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.759
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.756
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.756
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.756
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.756
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.755
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.755
Ca_03498 Cicer arietinum Ca_03498 I 0.751
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.750
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.749
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.749
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.748
Si002107m.g Setaria italica Si002107m.g I 0.748
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.747
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.747
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.745
Pm008294 Prunus mume Pm008294 I 0.745
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.744
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.742
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.742
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.741
MYB11 Arabidopsis thaliana AT3G62610 I 0.741
Bra037419 Brassica rapa Bra037419 I 0.740
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.740
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.740
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.740
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.740
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.740
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.740
MYB111 Arabidopsis thaliana AT5G49330 D 0.740
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.740
Bo7g092680 Brassica oleracea Bo7g092680 I 0.740
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.739
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.739
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.738
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.738
Cla022107 Citrullus lanatus Cla022107 I 0.737
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.736
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.733
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.731
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.731
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.731
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.730
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.730
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.729
OBART03G14380 Oryza barthii OBART03G14380 I 0.729
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.729
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.729
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.729
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.729
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.729
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.729
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.729
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.728
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.728
TCM_037555 Theobroma cacao TCM_037555 I 0.726
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.725
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.725
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.723
PK16958.1 Cannabis sativa PK16958.1 I 0.723
MDP0000607330 Malus domestica MDP0000607330 I 0.721
MDP0000119725 Malus domestica MDP0000119725 I 0.721
TCM_021318 Theobroma cacao TCM_021318 I 0.720
F775_21522 Aegilops tauschii F775_21522 I 0.719
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.718
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.715
TCM_021317 Theobroma cacao TCM_021317 I 0.715
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.715
F775_18434 Aegilops tauschii F775_18434 I 0.714
mgf012733m Mimulus guttatus mgf012733m I 0.713
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.712
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.711
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.709
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.708
Cla017646 Citrullus lanatus Cla017646 I 0.706
Bra036145 Brassica rapa Bra036145 I 0.706
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.705
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.704
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.704
Bra004456 Brassica rapa Bra004456 N 0.703
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.702
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.701
OB03G24320 Oryza brachyantha OB03G24320 I 0.699
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.698
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.696
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.695
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.695
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.695
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.695
OS01G0305900 Oryza sativa OS01G0305900 I 0.695
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.695
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.694
OB01G22640 Oryza brachyantha OB01G22640 I 0.694
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.691
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.690
TCM_015685 Theobroma cacao TCM_015685 I 0.688
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.688
PK16315.1 Cannabis sativa PK16315.1 I 0.688
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.687
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.685
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.685
MDP0000210851 Malus domestica MDP0000210851 I 0.684
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.684
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.682
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.682
TCM_010778 Theobroma cacao TCM_010778 I 0.682
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.682
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.681
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.681
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.681
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.681
MDP0000031172 Malus domestica MDP0000031172 I 0.681
Pm005570 Prunus mume Pm005570 I 0.681
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.681
TCM_037379 Theobroma cacao TCM_037379 I 0.680
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.680
mgf003233m Mimulus guttatus mgf003233m I 0.679
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.678
TCM_037376 Theobroma cacao TCM_037376 I 0.678
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.678
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.678
TCM_037559 Theobroma cacao TCM_037559 I 0.677
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.677
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.676
Pm020104 Prunus mume Pm020104 I 0.675
MDP0000140609 Malus domestica MDP0000140609 I 0.674
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.674
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.673
30068.m002544 Ricinus communis 30068.m002544 I 0.673
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.673
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.673
Ca_03154 Cicer arietinum Ca_03154 I 0.673
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.673
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.673
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.673
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.672
Pm024189 Prunus mume Pm024189 I 0.672
PRUPE_ppa018430mg Prunus persica PRUPE_ppa018430mg I 0.672
TCM_000535 Theobroma cacao TCM_000535 I 0.672
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.672
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.672
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.671
MDP0000887107 Malus domestica MDP0000887107 I 0.671
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.670
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.670
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.670
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.669
Bra007588 Brassica rapa Bra007588 I 0.669
TCM_004509 Theobroma cacao TCM_004509 I 0.669
Bo8g095790 Brassica oleracea Bo8g095790 I 0.669
Cla011528 Citrullus lanatus Cla011528 I 0.669
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.669
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.669
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.668
TCM_029121 Theobroma cacao TCM_029121 I 0.668
Si038905m.g Setaria italica Si038905m.g I 0.668
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.668
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.668
Lus10027459.g Linum usitatissimum Lus10027459.g I 0.667
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.667
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.667
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.667
Lus10039214.g Linum usitatissimum Lus10039214.g I 0.666
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.666
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.666
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.666
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.665
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.664
Ca_01329 Cicer arietinum Ca_01329 I 0.664
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.664
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.664
mgf024278m Mimulus guttatus mgf024278m I 0.664
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.663
Pm027048 Prunus mume Pm027048 I 0.663
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.663
Gorai.009G263200 Gossypium raimondii Gorai.009G263200 I 0.663
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I 0.663
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I 0.663
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.663
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.663
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.662
TCM_037377 Theobroma cacao TCM_037377 I 0.662
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I 0.662
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.661
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.661
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.661
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.661
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.661
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.661
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.661
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.661
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.661
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.661
Bo8g030520 Brassica oleracea Bo8g030520 I 0.661
Bra035532 Brassica rapa Bra035532 I 0.661
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.661
TT2 Arabidopsis thaliana AT5G35550 I 0.661