CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10016855.g
(
Linum usitatissimum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Lus10016855.g
T287996_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.718
0.860
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.699
0.806
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10016855
Myb
14
61
KGRWTAEEDQILTAYILQNGEGKWRSLPKDAGLLRCGKSCRLRWINYL
Lus10016855
Myb
67
112
RGNITKDEEETIVKLHNALGNRWSLIAAQLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Linum usitatissimum
TFs
242 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava40469.m1
Manihot esculenta
cassava40469.m1
I
0.804
gene05167-v1.0-hybrid
Fragaria vesca
gene05167-v1.0-hybrid
I
0.785
POPTR_0010s15090
Populus trichocarpa
POPTR_0010s15090
I
0.782
TCM_021318
Theobroma cacao
TCM_021318
I
0.774
Lus10036453.g
Linum usitatissimum
Lus10036453.g
I
0.773
Gorai.011G195100
Gossypium raimondii
Gorai.011G195100
I
0.772
PRUPE_ppa007594mg
Prunus persica
PRUPE_ppa007594mg
I
0.772
SapurV1A.0050s0720
Salix purpurea
SapurV1A.0050s0720
I
0.771
PK16958.1
Cannabis sativa
PK16958.1
I
0.767
orange1.1g041081m.g
Citrus sinensis
orange1.1g041081m.g
I
0.766
Ciclev10005376m.g
Citrus clementina
Ciclev10005376m.g
I
0.766
Pm008294
Prunus mume
Pm008294
I
0.761
MLOC_57220
Hordeum vulgare
MLOC_57220
I
0.753
Bra037419
Brassica rapa
Bra037419
I
0.742
Bo7g092680
Brassica oleracea
Bo7g092680
I
0.742
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.742
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.742
GLYMA02G01740
Glycine max
GLYMA02G01740
I
0.741
GSMUA_Achr5G21250_001
Musa acuminata
GSMUA_Achr5G21250_001
I
0.737
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.731
Sb01g037670
Sorghum bicolor
Sb01g037670
I
0.730
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.730
chr5.CM0239.580.nc
Lotus japonicus
chr5.CM0239.580.nc
I
0.730
Thhalv10006080m.g
Eutrema salsugineum
Thhalv10006080m.g
I
0.729
GLYMA17G03480
Glycine max
GLYMA17G03480
I
0.728
MTR_2g034790
Medicago truncatula
MTR_2g034790
I
0.728
MTR_4g121460
Medicago truncatula
MTR_4g121460
I
0.728
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.726
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.724
Gorai.008G141000
Gossypium raimondii
Gorai.008G141000
I
0.723
F775_11235
Aegilops tauschii
F775_11235
I
0.723
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.723
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.723
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.723
GLYMA15G15400
Glycine max
GLYMA15G15400
I
0.722
MDP0000119725
Malus domestica
MDP0000119725
I
0.722
GLYMA07G37142
Glycine max
GLYMA07G37142
I
0.722
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.722
MDP0000607330
Malus domestica
MDP0000607330
I
0.722
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.721
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.721
Si039538m.g
Setaria italica
Si039538m.g
I
0.720
ATMYB11
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002710
I
0.720
Pavir.Ib01420
Panicum virgatum
Pavir.Ib01420
I
0.720
Carubv10019345m.g
Capsella rubella
Carubv10019345m.g
I
0.720
Cagra.13170s0007
Capsella grandiflora
Cagra.13170s0007
I
0.720
BRADI1G64687
Brachypodium distachyon
BRADI1G64687
I
0.720
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.718
MYB111
Arabidopsis thaliana
AT5G49330
D
0.718
Gorai.007G124000
Gossypium raimondii
Gorai.007G124000
I
0.718
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.717
Pm005570
Prunus mume
Pm005570
I
0.717
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.717
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.717
TCM_000535
Theobroma cacao
TCM_000535
I
0.717
TCM_010778
Theobroma cacao
TCM_010778
I
0.717
ORGLA03G0196700
Oryza glaberrima
ORGLA03G0196700
I
0.717
MDP0000031172
Malus domestica
MDP0000031172
I
0.717
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.716
Bostr.13158s0261
Boechera stricta
Bostr.13158s0261
I
0.716
Cla011528
Citrullus lanatus
Cla011528
I
0.716
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.714
Bostr.25993s0011
Boechera stricta
Bostr.25993s0011
I
0.714
Thhalv10001498m.g
Eutrema salsugineum
Thhalv10001498m.g
I
0.714
MYB12
Arabidopsis lyrata
fgenesh2_kg.4__2983__AT2G47460.1
I
0.714
MDP0000210851
Malus domestica
MDP0000210851
I
0.714
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.714
Bra000453
Brassica rapa
Bra000453
I
0.714
MYB12
Arabidopsis thaliana
AT2G47460
I
0.714
Ca_03154
Cicer arietinum
Ca_03154
I
0.714
TCM_037376
Theobroma cacao
TCM_037376
I
0.714
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.714
TCM_037559
Theobroma cacao
TCM_037559
I
0.713
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.713
GSMUA_AchrUn_randomG12700_001
Musa acuminata
GSMUA_AchrUn_randomG12700_001
I
0.713
Cla009418
Citrullus lanatus
Cla009418
I
0.712
TCM_037379
Theobroma cacao
TCM_037379
I
0.712
Cucsa.069500
Cucumis sativus
Cucsa.069500
I
0.712
VIT_05s0077g01360
Vitis vinifera
VIT_05s0077g01360
I
0.712
GRMZM2G022686
Zea mays
GRMZM2G022686
I
0.712
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.711
Aquca_003_00583
Aquilegia coerulea
Aquca_003_00583
I
0.711
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.711
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.710
Cucsa.252700
Cucumis sativus
Cucsa.252700
I
0.709
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.709
Lus10002435.g
Linum usitatissimum
Lus10002435.g
I
0.709
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.709
Bra036145
Brassica rapa
Bra036145
I
0.709
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.709
TCM_004777
Theobroma cacao
TCM_004777
I
0.708
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.707
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.707
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.706
Eucgr.C03555
Eucalyptus grandis
Eucgr.C03555
I
0.705
Si002107m.g
Setaria italica
Si002107m.g
I
0.705
TCM_004509
Theobroma cacao
TCM_004509
I
0.705
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.705
Bo3g039690
Brassica oleracea
Bo3g039690
I
0.705
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.705
GRMZM2G057027
Zea mays
GRMZM2G057027
I
0.704
GRMZM2G084799
Zea mays
GRMZM2G084799
I
0.704
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.704
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
0.703
VIT_09s0002g01400
Vitis vinifera
VIT_09s0002g01400
I
0.703
Cla022107
Citrullus lanatus
Cla022107
I
0.703
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.702
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.702
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.702
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.702
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.701
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.701
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.701
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.701
Si038905m.g
Setaria italica
Si038905m.g
I
0.700
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.700
PK16315.1
Cannabis sativa
PK16315.1
I
0.700
MDP0000184538
Malus domestica
MDP0000184538
I
0.700
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
0.699
PK06182.1
Cannabis sativa
PK06182.1
D
0.699
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.698
Ciclev10009286m.g
Citrus clementina
Ciclev10009286m.g
I
0.698
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.697
gene15389-v1.0-hybrid
Fragaria vesca
gene15389-v1.0-hybrid
I
0.697
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.696
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.696
VIT_11s0016g01320
Vitis vinifera
VIT_11s0016g01320
I
0.696
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
0.696
Pm027047
Prunus mume
Pm027047
I
0.696
TRIUR3_05136
Triticum urartu
TRIUR3_05136
I
0.696
Solyc01g079620.2
Solanum lycopersicum
Solyc01g079620.2
I
0.695
BRADI2G11676
Brachypodium distachyon
BRADI2G11676
I
0.695
LPERR03G12690
Leersia perrieri
LPERR03G12690
I
0.695
OB03G24320
Oryza brachyantha
OB03G24320
I
0.695
VIT_04s0008g01820
Vitis vinifera
VIT_04s0008g01820
I
0.695
PGSC0003DMG400009033
Solanum tuberosum
PGSC0003DMG400009033
I
0.695
Lus10010273.g
Linum usitatissimum
Lus10010273.g
I
0.695
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
0.695
cassava37350.valid.m1
Manihot esculenta
cassava37350.valid.m1
I
0.695
TT2
Arabidopsis thaliana
AT5G35550
I
0.694
Bra035532
Brassica rapa
Bra035532
I
0.694
Bo8g030520
Brassica oleracea
Bo8g030520
I
0.694
Thhalv10003461m.g
Eutrema salsugineum
Thhalv10003461m.g
I
0.694
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
0.694
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
0.694
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.694
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
0.694
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
0.694
Lus10001458.g
Linum usitatissimum
Lus10001458.g
I
0.693
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.693
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.693
Cucsa.304110
Cucumis sativus
Cucsa.304110
I
0.692
Ca_03498
Cicer arietinum
Ca_03498
I
0.692
Eucgr.H01058
Eucalyptus grandis
Eucgr.H01058
I
0.691
PDK_20s1388491g004
Phoenix dactylifera
PDK_20s1388491g004
I
0.691
orange1.1g025602m.g
Citrus sinensis
orange1.1g025602m.g
I
0.691
TCM_021317
Theobroma cacao
TCM_021317
I
0.691
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.690
Pavir.Db02046
Panicum virgatum
Pavir.Db02046
I
0.689
Cla017646
Citrullus lanatus
Cla017646
I
0.689
gene15392-v1.0-hybrid
Fragaria vesca
gene15392-v1.0-hybrid
I
0.689
OB03G30160
Oryza brachyantha
OB03G30160
I
0.688
gene15386-v1.0-hybrid
Fragaria vesca
gene15386-v1.0-hybrid
I
0.687
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.687
PRUPE_ppa010252mg
Prunus persica
PRUPE_ppa010252mg
I
0.686
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.686
PRUPE_ppa023789mg
Prunus persica
PRUPE_ppa023789mg
I
0.685
PK11717.1
Cannabis sativa
PK11717.1
I
0.685
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.685
F775_18434
Aegilops tauschii
F775_18434
I
0.684
PRUPE_ppa023768mg
Prunus persica
PRUPE_ppa023768mg
I
0.684
MTR_7g109320
Medicago truncatula
MTR_7g109320
I
0.684
Pm005572
Prunus mume
Pm005572
I
0.684
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
0.684
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.683
Pm013279
Prunus mume
Pm013279
I
0.683
PK08038.1
Cannabis sativa
PK08038.1
I
0.683
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.681
mgf024278m
Mimulus guttatus
mgf024278m
I
0.681
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.681
OB06G16110
Oryza brachyantha
OB06G16110
I
0.681
ORGLA06G0059500
Oryza glaberrima
ORGLA06G0059500
I
0.681
ORUFI06G06900
Oryza rufipogon
ORUFI06G06900
I
0.681
Bo4g004500
Brassica oleracea
Bo4g004500
I
0.681
GSMUA_Achr5G18600_001
Musa acuminata
GSMUA_Achr5G18600_001
I
0.680
TCM_037377
Theobroma cacao
TCM_037377
I
0.680
MDP0000437717
Malus domestica
MDP0000437717
I
0.679
gene07416-v1.0-hybrid
Fragaria vesca
gene07416-v1.0-hybrid
I
0.679
GSMUA_Achr4G18180_001
Musa acuminata
GSMUA_Achr4G18180_001
I
0.678
Solyc06g009710.2
Solanum lycopersicum
Solyc06g009710.2
I
0.678
MDP0000135594
Malus domestica
MDP0000135594
I
0.678
GRMZM2G701063
Zea mays
GRMZM2G701063
I
0.678
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.677
Pm020104
Prunus mume
Pm020104
I
0.676
28226.m000839
Ricinus communis
28226.m000839
I
0.676
GLYMA19G43740
Glycine max
GLYMA19G43740
I
0.675
MDP0000145050
Malus domestica
MDP0000145050
I
0.674
PK20358.1
Cannabis sativa
PK20358.1
I
0.674
TCM_014091
Theobroma cacao
TCM_014091
I
0.673
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.673
Gorai.001G020500
Gossypium raimondii
Gorai.001G020500
N
0.673
Aquca_076_00099
Aquilegia coerulea
Aquca_076_00099
I
0.672
GRMZM2G051256
Zea mays
GRMZM2G051256
I
0.672
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.671
GLYMA19G40250
Glycine max
GLYMA19G40250
I
0.671
PK27708.1
Cannabis sativa
PK27708.1
I
0.670
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.670
OGLUM03G21860
Oryza glumaepatula
OGLUM03G21860
I
0.669
PGSC0003DMG400007304
Solanum tuberosum
PGSC0003DMG400007304
I
0.669
Solyc08g082890.2
Solanum lycopersicum
Solyc08g082890.2
I
0.668
PGSC0003DMG400012126
Solanum tuberosum
PGSC0003DMG400012126
I
0.668
TCM_037555
Theobroma cacao
TCM_037555
I
0.666
Gorai.013G088200
Gossypium raimondii
Gorai.013G088200
I
0.666
Pm005571
Prunus mume
Pm005571
I
0.666
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.666
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.666
mgf003233m
Mimulus guttatus
mgf003233m
I
0.665
POPTR_0005s24550
Populus trichocarpa
POPTR_0005s24550
I
0.665
SapurV1A.1746s0010
Salix purpurea
SapurV1A.1746s0010
I
0.665
SapurV1A.0483s0100
Salix purpurea
SapurV1A.0483s0100
I
0.665
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.663
evm.TU.supercontig_28.71
Carica papaya
evm.TU.supercontig_28.71
I
0.663
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.663
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.663
SapurV1A.0390s0200
Salix purpurea
SapurV1A.0390s0200
I
0.662
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.662
VIT_05s0049g01020
Vitis vinifera
VIT_05s0049g01020
I
0.662
SapurV1A.1730s0020
Salix purpurea
SapurV1A.1730s0020
I
0.662
PK14811.1
Cannabis sativa
PK14811.1
I
0.662
MDP0000318013
Malus domestica
MDP0000318013
I
0.662
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
0.661
OBART03G14380
Oryza barthii
OBART03G14380
I
0.661
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.661
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
0.661
Ciclev10022057m.g
Citrus clementina
Ciclev10022057m.g
I
0.661
gene08694-v1.0-hybrid
Fragaria vesca
gene08694-v1.0-hybrid
I
0.661
OGLUM01G14390
Oryza glumaepatula
OGLUM01G14390
I
0.661
BGIOSGA003345
Oryza indica
BGIOSGA003345
I
0.661
ORUFI01G13920
Oryza rufipogon
ORUFI01G13920
I
0.661
OS01G0305900
Oryza sativa
OS01G0305900
I
0.661
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
0.661
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
0.661