OGLUM03G21860 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM03G21860 T275699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.668 0.739
GRMZM2G005066
M11056_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.665 0.696
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.662 0.745
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.661 0.713
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G21860.1 Myb 14 61
OGLUM03G21860.1 Myb 67 114
OGLUM03G21860.2 Myb 14 61
OGLUM03G21860.2 Myb 67 123

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.861
Si038905m.g Setaria italica Si038905m.g I 0.815
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.807
OB03G30160 Oryza brachyantha OB03G30160 I 0.803
MDP0000031172 Malus domestica MDP0000031172 I 0.796
MDP0000210851 Malus domestica MDP0000210851 I 0.796
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.796
Pm005570 Prunus mume Pm005570 I 0.796
TCM_037376 Theobroma cacao TCM_037376 I 0.779
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.779
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.779
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.779
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.779
TCM_037379 Theobroma cacao TCM_037379 I 0.776
TCM_037559 Theobroma cacao TCM_037559 I 0.772
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.772
Ca_03154 Cicer arietinum Ca_03154 I 0.770
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.770
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.769
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.768
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.767
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.767
PK16315.1 Cannabis sativa PK16315.1 I 0.766
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.763
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.762
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.762
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.761
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.759
TCM_004509 Theobroma cacao TCM_004509 I 0.758
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.757
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.757
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.756
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.756
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.755
TCM_010778 Theobroma cacao TCM_010778 I 0.755
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.755
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.754
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.754
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.753
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.752
Pm013279 Prunus mume Pm013279 I 0.752
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.752
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.751
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.750
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.750
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.750
LPERR03G18050 Leersia perrieri LPERR03G18050 N 0.749
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.749
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.748
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.748
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.747
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.746
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.746
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.745
TT2 Arabidopsis thaliana AT5G35550 I 0.745
Bra035532 Brassica rapa Bra035532 I 0.745
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.745
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.745
Bo8g030520 Brassica oleracea Bo8g030520 I 0.745
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.745
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.745
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.745
MDP0000437717 Malus domestica MDP0000437717 I 0.745
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.741
OB06G16110 Oryza brachyantha OB06G16110 I 0.741
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.741
TCM_000535 Theobroma cacao TCM_000535 I 0.739
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.738
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.737
28226.m000839 Ricinus communis 28226.m000839 I 0.736
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.735
Si008089m.g Setaria italica Si008089m.g I 0.734
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.733
Pm005572 Prunus mume Pm005572 I 0.732
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.732
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.732
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.732
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.731
Pm027047 Prunus mume Pm027047 I 0.731
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.731
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.730
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.728
TCM_037555 Theobroma cacao TCM_037555 I 0.728
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.728
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.728
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.727
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.720
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.720
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.719
TCM_029121 Theobroma cacao TCM_029121 I 0.718
TCM_037377 Theobroma cacao TCM_037377 I 0.718
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.718
MDP0000184538 Malus domestica MDP0000184538 I 0.717
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.716
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.714
Pm005571 Prunus mume Pm005571 I 0.713
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.713
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.712
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.711
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.710
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.710
Gorai.001G020500 Gossypium raimondii Gorai.001G020500 N 0.709
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.707
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.707
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.706
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.706
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.706
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.704
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.703
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.703
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.702
MDP0000318013 Malus domestica MDP0000318013 I 0.701
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.697
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.696
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.695
MDP0000887107 Malus domestica MDP0000887107 I 0.694
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.693
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.692
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.691
Pm027045 Prunus mume Pm027045 I 0.690
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.690
MDP0000140609 Malus domestica MDP0000140609 I 0.689
POPTR_0003s14430 Populus trichocarpa POPTR_0003s14430 I 0.689
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.689
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.687
Pm005573 Prunus mume Pm005573 I 0.687
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.686
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.686
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.686
F775_11235 Aegilops tauschii F775_11235 I 0.686
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.684
Pm027048 Prunus mume Pm027048 I 0.684
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.684
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.684
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.683
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.683
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.683
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.682
Cla011528 Citrullus lanatus Cla011528 I 0.682
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.682
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.682
Bo1g138250 Brassica oleracea Bo1g138250 I 0.681
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.681
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.681
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.680
PRUPE_ppa010846mg Prunus persica PRUPE_ppa010846mg I 0.680
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.680
Pm029185 Prunus mume Pm029185 I 0.680
F775_17212 Aegilops tauschii F775_17212 I 0.680
Bra039395 Brassica rapa Bra039395 I 0.678
Pm029489 Prunus mume Pm029489 I 0.678
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.676
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.676
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.676
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.675
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.674
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.673
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.673
Solyc05g008250.1 Solanum lycopersicum Solyc05g008250.1 I 0.673
F775_19148 Aegilops tauschii F775_19148 I 0.673
PGSC0003DMG400030548 Solanum tuberosum PGSC0003DMG400030548 I 0.673
Eucgr.B02896 Eucalyptus grandis Eucgr.B02896 I 0.673
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.671
29739.m003784 Ricinus communis 29739.m003784 I 0.670
GRMZM2G005066 Zea mays GRMZM2G005066 D 0.670
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.669
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.669
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.669
MDP0000250597 Malus domestica MDP0000250597 I 0.669
AMTR_s00005p00268890 Amborella trichopoda AMTR_s00005p00268890 I 0.669
SapurV1A.0163s0150 Salix purpurea SapurV1A.0163s0150 I 0.669
POPTR_0008s12750 Populus trichocarpa POPTR_0008s12750 I 0.669
POPTR_0010s12420 Populus trichocarpa POPTR_0010s12420 I 0.669
TCM_010839 Theobroma cacao TCM_010839 I 0.669
VIT_01s0011g04760 Vitis vinifera VIT_01s0011g04760 I 0.669
VIT_17s0000g02660 Vitis vinifera VIT_17s0000g02660 I 0.669
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.669
MLOC_21581 Hordeum vulgare MLOC_21581 N 0.666
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.666
30068.m002544 Ricinus communis 30068.m002544 I 0.666
Thhalv10022057m.g Eutrema salsugineum Thhalv10022057m.g I 0.664
Bostr.3640s0147 Boechera stricta Bostr.3640s0147 I 0.664
MTR_8g020490 Medicago truncatula MTR_8g020490 I 0.664
MYB5 Arabidopsis thaliana AT3G13540 I 0.664
evm.TU.supercontig_25.114 Carica papaya evm.TU.supercontig_25.114 I 0.664
ATMYB5 Arabidopsis lyrata scaffold_301556.1 I 0.664
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.664
VIT_04s0008g01830 Vitis vinifera VIT_04s0008g01830 N 0.663
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.662
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.662
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.662
MYB111 Arabidopsis thaliana AT5G49330 D 0.662
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.662
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.662
Bra037419 Brassica rapa Bra037419 I 0.662
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.662
MYB12 Arabidopsis thaliana AT2G47460 I 0.662
Bra012337 Brassica rapa Bra012337 I 0.661
Gorai.002G180300 Gossypium raimondii Gorai.002G180300 I 0.661
Bostr.12659s0116 Boechera stricta Bostr.12659s0116 I 0.661
Bo8g071580 Brassica oleracea Bo8g071580 I 0.661
MYB3 Arabidopsis thaliana AT1G22640 D 0.661
Bo7g057770 Brassica oleracea Bo7g057770 I 0.661
Cagra.0114s0040 Capsella grandiflora Cagra.0114s0040 I 0.661
Thhalv10008456m.g Eutrema salsugineum Thhalv10008456m.g I 0.661
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.661
ATMYB3 Arabidopsis lyrata fgenesh2_kg.1__2457__AT1G22640.1 I 0.661
Carubv10009761m.g Capsella rubella Carubv10009761m.g I 0.661