CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM03G21860
(
Oryza glumaepatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OGLUM03G21860
T275699_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.673
0.755
GRMZM2G005066
M11056_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.665
0.696
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.662
0.745
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.661
0.713
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM03G21860.1
Myb
14
61
RGAWTAMEDDILVSYIAKHGEGKWGALPKRAGLKRCGKSCRLRWLNYL
OGLUM03G21860.1
Myb
67
114
RGNISGDEEELILRLHTLLGNRPCMYWSTGRLPGRTDNEIKNYWNSTL
OGLUM03G21860.2
Myb
14
61
RGAWTAMEDDILVSYIAKHGEGKWGALPKRAGLKRCGKSCRLRWLNYL
OGLUM03G21860.2
Myb
67
123
RGNISGDEEELILRLHTLLGNRPRRFYNYDLLTWSLIAGRLPGRTDNEIKNYWNSTL
Links
Other
Myb/SANT
family TFs
Other
Oryza glumaepatula
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA03G0196700
Oryza glaberrima
ORGLA03G0196700
I
0.861
Si038905m.g
Setaria italica
Si038905m.g
I
0.815
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.807
OB03G30160
Oryza brachyantha
OB03G30160
I
0.803
MDP0000031172
Malus domestica
MDP0000031172
I
0.796
MDP0000210851
Malus domestica
MDP0000210851
I
0.796
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.796
Pm005570
Prunus mume
Pm005570
I
0.796
TCM_037376
Theobroma cacao
TCM_037376
I
0.779
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.779
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.779
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.779
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.779
TCM_037379
Theobroma cacao
TCM_037379
I
0.776
TCM_037559
Theobroma cacao
TCM_037559
I
0.772
gene15392-v1.0-hybrid
Fragaria vesca
gene15392-v1.0-hybrid
I
0.772
Ca_03154
Cicer arietinum
Ca_03154
I
0.770
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.770
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.769
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
0.768
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.767
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.767
PK16315.1
Cannabis sativa
PK16315.1
I
0.766
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.763
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.762
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.762
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.761
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.759
TCM_004509
Theobroma cacao
TCM_004509
I
0.758
VIT_09s0002g01400
Vitis vinifera
VIT_09s0002g01400
I
0.757
Eucgr.C03555
Eucalyptus grandis
Eucgr.C03555
I
0.757
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.756
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.756
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.755
TCM_010778
Theobroma cacao
TCM_010778
I
0.755
VIT_04s0008g01820
Vitis vinifera
VIT_04s0008g01820
I
0.755
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.754
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.754
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.753
PRUPE_ppa010252mg
Prunus persica
PRUPE_ppa010252mg
I
0.752
Pm013279
Prunus mume
Pm013279
I
0.752
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.752
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.751
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.750
ORUFI06G06900
Oryza rufipogon
ORUFI06G06900
I
0.750
ORGLA06G0059500
Oryza glaberrima
ORGLA06G0059500
I
0.750
LPERR03G18050
Leersia perrieri
LPERR03G18050
N
0.749
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.749
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.748
gene15389-v1.0-hybrid
Fragaria vesca
gene15389-v1.0-hybrid
I
0.748
PRUPE_ppa023789mg
Prunus persica
PRUPE_ppa023789mg
I
0.747
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.746
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.746
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
0.745
TT2
Arabidopsis thaliana
AT5G35550
I
0.745
Bra035532
Brassica rapa
Bra035532
I
0.745
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
0.745
VIT_11s0016g01320
Vitis vinifera
VIT_11s0016g01320
I
0.745
Bo8g030520
Brassica oleracea
Bo8g030520
I
0.745
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
0.745
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
0.745
Thhalv10003461m.g
Eutrema salsugineum
Thhalv10003461m.g
I
0.745
MDP0000437717
Malus domestica
MDP0000437717
I
0.745
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.741
OB06G16110
Oryza brachyantha
OB06G16110
I
0.741
gene07416-v1.0-hybrid
Fragaria vesca
gene07416-v1.0-hybrid
I
0.741
TCM_000535
Theobroma cacao
TCM_000535
I
0.739
GRMZM2G701063
Zea mays
GRMZM2G701063
I
0.738
GSMUA_Achr10G17610_001
Musa acuminata
GSMUA_Achr10G17610_001
I
0.737
28226.m000839
Ricinus communis
28226.m000839
I
0.736
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.735
Si008089m.g
Setaria italica
Si008089m.g
I
0.734
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.733
Pm005572
Prunus mume
Pm005572
I
0.732
Pavir.Db02046
Panicum virgatum
Pavir.Db02046
I
0.732
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.732
PRUPE_ppa023768mg
Prunus persica
PRUPE_ppa023768mg
I
0.732
Aquca_076_00099
Aquilegia coerulea
Aquca_076_00099
I
0.731
Pm027047
Prunus mume
Pm027047
I
0.731
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
0.731
gene15386-v1.0-hybrid
Fragaria vesca
gene15386-v1.0-hybrid
I
0.730
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.728
TCM_037555
Theobroma cacao
TCM_037555
I
0.728
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.728
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.728
POPTR_0018s05530
Populus trichocarpa
POPTR_0018s05530
I
0.727
Ciclev10009286m.g
Citrus clementina
Ciclev10009286m.g
I
0.720
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.720
evm.TU.supercontig_28.71
Carica papaya
evm.TU.supercontig_28.71
I
0.719
TCM_029121
Theobroma cacao
TCM_029121
I
0.718
TCM_037377
Theobroma cacao
TCM_037377
I
0.718
Sb10g006700
Sorghum bicolor
Sb10g006700
I
0.718
MDP0000184538
Malus domestica
MDP0000184538
I
0.717
orange1.1g025602m.g
Citrus sinensis
orange1.1g025602m.g
I
0.716
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
0.714
Pm005571
Prunus mume
Pm005571
I
0.713
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.713
cassava2758.m1
Manihot esculenta
cassava2758.m1
I
0.712
PDK_20s1918041g001
Phoenix dactylifera
PDK_20s1918041g001
I
0.711
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.710
Eucgr.F03176
Eucalyptus grandis
Eucgr.F03176
I
0.710
Gorai.001G020500
Gossypium raimondii
Gorai.001G020500
N
0.709
LjT02E24.110.nc
Lotus japonicus
LjT02E24.110.nc
I
0.707
SapurV1A.0710s0050
Salix purpurea
SapurV1A.0710s0050
I
0.707
GLYMA10G35061
Glycine max
GLYMA10G35061
I
0.706
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.706
SapurV1A.0059s0160
Salix purpurea
SapurV1A.0059s0160
I
0.706
Eucgr.C03151
Eucalyptus grandis
Eucgr.C03151
I
0.704
GSMUA_Achr9G27380_001
Musa acuminata
GSMUA_Achr9G27380_001
I
0.703
POPTR_0018s05750
Populus trichocarpa
POPTR_0018s05750
I
0.703
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.702
MDP0000318013
Malus domestica
MDP0000318013
I
0.701
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.697
POPTR_0018s05740
Populus trichocarpa
POPTR_0018s05740
I
0.696
Eucgr.C03554
Eucalyptus grandis
Eucgr.C03554
I
0.695
MDP0000887107
Malus domestica
MDP0000887107
I
0.694
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.693
LjT02E24.60.nc
Lotus japonicus
LjT02E24.60.nc
I
0.692
gene08694-v1.0-hybrid
Fragaria vesca
gene08694-v1.0-hybrid
I
0.691
Pm027045
Prunus mume
Pm027045
I
0.690
LjT02E24.130.nc
Lotus japonicus
LjT02E24.130.nc
I
0.690
MDP0000140609
Malus domestica
MDP0000140609
I
0.689
POPTR_0003s14430
Populus trichocarpa
POPTR_0003s14430
I
0.689
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I
0.689
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.687
Pm005573
Prunus mume
Pm005573
I
0.687
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.686
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.686
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.686
F775_11235
Aegilops tauschii
F775_11235
I
0.686
PRUPE_ppa017136mg
Prunus persica
PRUPE_ppa017136mg
I
0.684
Pm027048
Prunus mume
Pm027048
I
0.684
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.684
gene12738-v1.0-hybrid
Fragaria vesca
gene12738-v1.0-hybrid
I
0.684
Eucgr.J02819
Eucalyptus grandis
Eucgr.J02819
N
0.683
Lus10033438.g
Linum usitatissimum
Lus10033438.g
I
0.683
Lus10000470.g
Linum usitatissimum
Lus10000470.g
I
0.683
Traes_4DL_8A9D9ACCB
Triticum aestivum
Traes_4DL_8A9D9ACCB
I
0.682
Cla011528
Citrullus lanatus
Cla011528
I
0.682
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.682
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
0.682
Bo1g138250
Brassica oleracea
Bo1g138250
I
0.681
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.681
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I
0.681
TRIUR3_09734
Triticum urartu
TRIUR3_09734
I
0.680
PRUPE_ppa010846mg
Prunus persica
PRUPE_ppa010846mg
I
0.680
GSMUA_Achr7G18560_001
Musa acuminata
GSMUA_Achr7G18560_001
I
0.680
Pm029185
Prunus mume
Pm029185
I
0.680
F775_17212
Aegilops tauschii
F775_17212
I
0.680
Bra039395
Brassica rapa
Bra039395
I
0.678
Pm029489
Prunus mume
Pm029489
I
0.678
Eucgr.C03153
Eucalyptus grandis
Eucgr.C03153
N
0.676
Eucgr.C03152
Eucalyptus grandis
Eucgr.C03152
N
0.676
PRUPE_ppa019380mg
Prunus persica
PRUPE_ppa019380mg
I
0.676
Aquca_009_00493
Aquilegia coerulea
Aquca_009_00493
I
0.675
Eucgr.B00866
Eucalyptus grandis
Eucgr.B00866
I
0.674
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
0.673
Traes_4DL_26A958CDD
Triticum aestivum
Traes_4DL_26A958CDD
I
0.673
Solyc05g008250.1
Solanum lycopersicum
Solyc05g008250.1
I
0.673
F775_19148
Aegilops tauschii
F775_19148
I
0.673
PGSC0003DMG400030548
Solanum tuberosum
PGSC0003DMG400030548
I
0.673
Eucgr.B02896
Eucalyptus grandis
Eucgr.B02896
I
0.673
Eucgr.K01504
Eucalyptus grandis
Eucgr.K01504
I
0.671
29739.m003784
Ricinus communis
29739.m003784
I
0.670
GRMZM2G005066
Zea mays
GRMZM2G005066
D
0.670
AMTR_s00024p00225650
Amborella trichopoda
AMTR_s00024p00225650
N
0.669
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.669
Lus10016855.g
Linum usitatissimum
Lus10016855.g
I
0.669
MDP0000250597
Malus domestica
MDP0000250597
I
0.669
AMTR_s00005p00268890
Amborella trichopoda
AMTR_s00005p00268890
I
0.669
SapurV1A.0163s0150
Salix purpurea
SapurV1A.0163s0150
I
0.669
POPTR_0008s12750
Populus trichocarpa
POPTR_0008s12750
I
0.669
POPTR_0010s12420
Populus trichocarpa
POPTR_0010s12420
I
0.669
TCM_010839
Theobroma cacao
TCM_010839
I
0.669
VIT_01s0011g04760
Vitis vinifera
VIT_01s0011g04760
I
0.669
VIT_17s0000g02660
Vitis vinifera
VIT_17s0000g02660
I
0.669
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.669
MLOC_21581
Hordeum vulgare
MLOC_21581
N
0.666
GLYMA20G32510
Glycine max
GLYMA20G32510
I
0.666
30068.m002544
Ricinus communis
30068.m002544
I
0.666
Thhalv10022057m.g
Eutrema salsugineum
Thhalv10022057m.g
I
0.664
Bostr.3640s0147
Boechera stricta
Bostr.3640s0147
I
0.664
MTR_8g020490
Medicago truncatula
MTR_8g020490
I
0.664
MYB5
Arabidopsis thaliana
AT3G13540
I
0.664
evm.TU.supercontig_25.114
Carica papaya
evm.TU.supercontig_25.114
I
0.664
ATMYB5
Arabidopsis lyrata
scaffold_301556.1
I
0.664
SapurV1A.0035s0030
Salix purpurea
SapurV1A.0035s0030
I
0.664
VIT_04s0008g01830
Vitis vinifera
VIT_04s0008g01830
N
0.663
MYB12
Arabidopsis lyrata
fgenesh2_kg.4__2983__AT2G47460.1
I
0.662
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.662
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.662
MYB111
Arabidopsis thaliana
AT5G49330
D
0.662
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.662
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.662
Bra037419
Brassica rapa
Bra037419
I
0.662
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.662
MYB12
Arabidopsis thaliana
AT2G47460
I
0.662
Bra012337
Brassica rapa
Bra012337
I
0.661
Gorai.002G180300
Gossypium raimondii
Gorai.002G180300
I
0.661
Bostr.12659s0116
Boechera stricta
Bostr.12659s0116
I
0.661
Bo8g071580
Brassica oleracea
Bo8g071580
I
0.661
MYB3
Arabidopsis thaliana
AT1G22640
D
0.661
Bo7g057770
Brassica oleracea
Bo7g057770
I
0.661
Cagra.0114s0040
Capsella grandiflora
Cagra.0114s0040
I
0.661
Thhalv10008456m.g
Eutrema salsugineum
Thhalv10008456m.g
I
0.661
cassava6348.valid.m1
Manihot esculenta
cassava6348.valid.m1
I
0.661
ATMYB3
Arabidopsis lyrata
fgenesh2_kg.1__2457__AT1G22640.1
I
0.661
Carubv10009761m.g
Capsella rubella
Carubv10009761m.g
I
0.661