29739.m003784 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29739.m003784 T283782_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.664 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29739.m003784 Myb 13 60
29739.m003784 Myb 66 111

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.749
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.729
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.729
Si038905m.g Setaria italica Si038905m.g I 0.729
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.729
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.727
TCM_010778 Theobroma cacao TCM_010778 I 0.724
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.721
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.721
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.720
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.718
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.716
TCM_037379 Theobroma cacao TCM_037379 I 0.716
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.715
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.715
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.713
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.712
TCM_037559 Theobroma cacao TCM_037559 I 0.712
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.712
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.711
TCM_004509 Theobroma cacao TCM_004509 I 0.711
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.711
TCM_037376 Theobroma cacao TCM_037376 I 0.711
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.710
Ca_03154 Cicer arietinum Ca_03154 I 0.709
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.708
Pm005570 Prunus mume Pm005570 I 0.708
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.708
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.708
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.708
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.708
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.708
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.708
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.708
MDP0000031172 Malus domestica MDP0000031172 I 0.708
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.706
MDP0000210851 Malus domestica MDP0000210851 I 0.705
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.703
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.702
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.702
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.702
Bra035532 Brassica rapa Bra035532 I 0.702
TT2 Arabidopsis thaliana AT5G35550 I 0.702
Bo8g030520 Brassica oleracea Bo8g030520 I 0.702
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.702
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.702
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.701
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.701
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.701
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.701
PK16315.1 Cannabis sativa PK16315.1 I 0.701
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.701
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.700
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.700
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.700
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.700
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.699
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.699
Pm005571 Prunus mume Pm005571 I 0.698
Pm013279 Prunus mume Pm013279 I 0.698
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.698
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.697
TCM_000535 Theobroma cacao TCM_000535 I 0.696
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.695
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.694
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.694
OB03G30160 Oryza brachyantha OB03G30160 I 0.693
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.692
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.692
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.692
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.691
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.691
TCM_037377 Theobroma cacao TCM_037377 I 0.689
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.689
28226.m000839 Ricinus communis 28226.m000839 I 0.689
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.689
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.688
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.688
OB06G16110 Oryza brachyantha OB06G16110 I 0.688
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.688
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.687
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.687
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.687
Pm027045 Prunus mume Pm027045 I 0.686
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.686
VIT_04s0008g01830 Vitis vinifera VIT_04s0008g01830 N 0.686
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.685
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.684
Eucgr.J02816 Eucalyptus grandis Eucgr.J02816 I 0.684
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.684
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.682
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.682
Pm005572 Prunus mume Pm005572 I 0.682
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.680
Gorai.001G020500 Gossypium raimondii Gorai.001G020500 N 0.678
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.677
MDP0000437717 Malus domestica MDP0000437717 I 0.676
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.676
Gorai.007G362200 Gossypium raimondii Gorai.007G362200 I 0.676
cassava41021.m1 Manihot esculenta cassava41021.m1 I 0.675
Ca_12762 Cicer arietinum Ca_12762 N 0.674
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.673
Pm029489 Prunus mume Pm029489 I 0.671
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.670
MDP0000184538 Malus domestica MDP0000184538 I 0.670
OGLUM03G21860 Oryza glumaepatula OGLUM03G21860 I 0.670
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.670
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.670
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.669
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.669
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.669
Pm027047 Prunus mume Pm027047 I 0.668
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.668
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.668
TCM_037555 Theobroma cacao TCM_037555 I 0.667
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.667
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.667
Pm005573 Prunus mume Pm005573 I 0.666
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.666
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.666
MDP0000318013 Malus domestica MDP0000318013 I 0.666
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.665
PK23594.1 Cannabis sativa PK23594.1 I 0.664
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.664
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.664
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.664
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.664
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.664
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.663
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.663
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.663
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.662
MDP0000650225 Malus domestica MDP0000650225 I 0.661
cassava3467.m1 Manihot esculenta cassava3467.m1 N 0.661
Cla011528 Citrullus lanatus Cla011528 I 0.661