Lus10036453.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10036453.g T288175_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.688 0.839
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10036453 Myb 14 61
Lus10036453 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.773
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.731
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.720
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.720
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.718
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.714
Ca_03154 Cicer arietinum Ca_03154 I 0.713
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.710
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.706
Pm008294 Prunus mume Pm008294 I 0.706
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.704
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.704
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.701
MDP0000607330 Malus domestica MDP0000607330 I 0.701
MDP0000119725 Malus domestica MDP0000119725 I 0.701
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.700
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.699
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.699
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.698
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.696
TCM_000535 Theobroma cacao TCM_000535 I 0.696
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.695
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.695
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.693
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.693
F775_11235 Aegilops tauschii F775_11235 I 0.693
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.693
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.693
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.691
TCM_021318 Theobroma cacao TCM_021318 I 0.690
Si039538m.g Setaria italica Si039538m.g I 0.690
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.690
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.688
Bra037419 Brassica rapa Bra037419 I 0.688
MYB111 Arabidopsis thaliana AT5G49330 D 0.688
Bo7g092680 Brassica oleracea Bo7g092680 I 0.688
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.688
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.688
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.687
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.687
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.687
TCM_010778 Theobroma cacao TCM_010778 I 0.687
Pm005570 Prunus mume Pm005570 I 0.687
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.687
MDP0000031172 Malus domestica MDP0000031172 I 0.687
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.685
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.685
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.685
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.684
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.684
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.684
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.684
Bra000453 Brassica rapa Bra000453 I 0.684
MYB12 Arabidopsis thaliana AT2G47460 I 0.684
MDP0000210851 Malus domestica MDP0000210851 I 0.683
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.683
TCM_037376 Theobroma cacao TCM_037376 I 0.683
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.682
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.682
TCM_037559 Theobroma cacao TCM_037559 I 0.682
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.682
TCM_037379 Theobroma cacao TCM_037379 I 0.682
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.681
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.680
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.679
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.679
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.679
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.679
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.679
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.679
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.677
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.677
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.677
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.677
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.677
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.676
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.676
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.676
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.675
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.675
Bo3g039690 Brassica oleracea Bo3g039690 I 0.675
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.674
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.674
TCM_004509 Theobroma cacao TCM_004509 I 0.674
Cla022107 Citrullus lanatus Cla022107 I 0.673
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.673
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.673
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.673
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.673
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.671
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.671
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.671
PK16315.1 Cannabis sativa PK16315.1 I 0.670
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.670
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.670
Si038905m.g Setaria italica Si038905m.g I 0.670
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.670
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.670
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.669
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.668
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.668
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.668
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.668
Ca_03498 Cicer arietinum Ca_03498 I 0.667
Cla017646 Citrullus lanatus Cla017646 I 0.667
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.666
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.666
TCM_021317 Theobroma cacao TCM_021317 I 0.666
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.666
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.666
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.665
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.665
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.665
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.665
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.665
OB03G24320 Oryza brachyantha OB03G24320 I 0.665
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.664
Bo8g030520 Brassica oleracea Bo8g030520 I 0.664
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.664
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.664
Bra035532 Brassica rapa Bra035532 I 0.664
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.664
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.664
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.664
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.664
TT2 Arabidopsis thaliana AT5G35550 I 0.664
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.664
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.663
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.663
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.663
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.663
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.662
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.661
PK16958.1 Cannabis sativa PK16958.1 I 0.661