CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR03G12690
(
Leersia perrieri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
LPERR03G12690
T273687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.782
0.860
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.755
0.828
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR03G12690.1
Myb
14
61
RGRWTAEEDERLAGYIAKHGEGSWRSLPKNAGLLRCGKSCRLRWINYL
LPERR03G12690.1
Myb
67
112
RGNIAKEEEDVIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHL
LPERR03G12690.2
Myb
14
61
RGRWTAEEDERLAGYIAKHGEGSWRSLPKNAGLLRCGKSCRLRWINYL
LPERR03G12690.2
Myb
67
140
RGNIAKEEEDVIIKLHATLGNRYADRSTSSHFLLCFCCFLFLIMQMPISEWSLIASHLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Leersia perrieri
TFs
231 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ib01420
Panicum virgatum
Pavir.Ib01420
I
0.884
Si039538m.g
Setaria italica
Si039538m.g
I
0.884
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
0.860
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
0.850
OBART03G14380
Oryza barthii
OBART03G14380
I
0.850
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
0.850
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
0.850
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
0.850
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.848
F775_11235
Aegilops tauschii
F775_11235
I
0.848
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.848
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.848
OB03G24320
Oryza brachyantha
OB03G24320
I
0.837
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.831
GRMZM2G022686
Zea mays
GRMZM2G022686
I
0.828
GRMZM2G084799
Zea mays
GRMZM2G084799
I
0.821
GRMZM2G057027
Zea mays
GRMZM2G057027
I
0.821
MLOC_57220
Hordeum vulgare
MLOC_57220
I
0.818
Sb01g037670
Sorghum bicolor
Sb01g037670
I
0.816
Cla017646
Citrullus lanatus
Cla017646
I
0.809
OGLUM03G14490
Oryza glumaepatula
OGLUM03G14490
I
0.802
ORGLA03G0138900
Oryza glaberrima
ORGLA03G0138900
I
0.802
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.801
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.797
GSMUA_Achr5G21250_001
Musa acuminata
GSMUA_Achr5G21250_001
I
0.795
GSMUA_AchrUn_randomG12700_001
Musa acuminata
GSMUA_AchrUn_randomG12700_001
I
0.795
Cla009418
Citrullus lanatus
Cla009418
I
0.794
Bo3g039690
Brassica oleracea
Bo3g039690
I
0.788
Cucsa.069500
Cucumis sativus
Cucsa.069500
I
0.785
BRADI1G64687
Brachypodium distachyon
BRADI1G64687
I
0.785
PGSC0003DMG400004371
Solanum tuberosum
PGSC0003DMG400004371
I
0.784
PK06182.1
Cannabis sativa
PK06182.1
D
0.782
GRMZM2G051256
Zea mays
GRMZM2G051256
I
0.781
Bostr.25993s0011
Boechera stricta
Bostr.25993s0011
I
0.779
Thhalv10001498m.g
Eutrema salsugineum
Thhalv10001498m.g
I
0.779
Bra000453
Brassica rapa
Bra000453
I
0.779
PGSC0003DMG400009033
Solanum tuberosum
PGSC0003DMG400009033
I
0.777
Solyc01g079620.2
Solanum lycopersicum
Solyc01g079620.2
I
0.777
chr5.CM0239.580.nc
Lotus japonicus
chr5.CM0239.580.nc
I
0.777
MYB12
Arabidopsis thaliana
AT2G47460
I
0.775
Solyc12g049350.1
Solanum lycopersicum
Solyc12g049350.1
I
0.775
MYB12
Arabidopsis lyrata
fgenesh2_kg.4__2983__AT2G47460.1
I
0.775
BRADI2G11676
Brachypodium distachyon
BRADI2G11676
I
0.774
TCM_004777
Theobroma cacao
TCM_004777
I
0.773
Traes_1DS_711044AD5
Triticum aestivum
Traes_1DS_711044AD5
I
0.773
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.772
cassava40469.m1
Manihot esculenta
cassava40469.m1
I
0.770
Si002107m.g
Setaria italica
Si002107m.g
I
0.769
Solyc06g009710.2
Solanum lycopersicum
Solyc06g009710.2
I
0.769
Cagra.13170s0007
Capsella grandiflora
Cagra.13170s0007
I
0.768
Aquca_003_00583
Aquilegia coerulea
Aquca_003_00583
I
0.768
Carubv10019345m.g
Capsella rubella
Carubv10019345m.g
I
0.768
Bostr.13158s0261
Boechera stricta
Bostr.13158s0261
I
0.768
Bra036145
Brassica rapa
Bra036145
I
0.764
Cla022107
Citrullus lanatus
Cla022107
I
0.764
Cucsa.252700
Cucumis sativus
Cucsa.252700
I
0.764
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.764
Thhalv10006080m.g
Eutrema salsugineum
Thhalv10006080m.g
I
0.763
ATMYB11
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002710
I
0.763
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.760
PGSC0003DMG400007304
Solanum tuberosum
PGSC0003DMG400007304
I
0.760
PRUPE_ppa007594mg
Prunus persica
PRUPE_ppa007594mg
I
0.760
MDP0000119725
Malus domestica
MDP0000119725
I
0.760
MDP0000607330
Malus domestica
MDP0000607330
I
0.760
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
0.759
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.757
Gorai.008G141000
Gossypium raimondii
Gorai.008G141000
I
0.757
GLYMA02G01740
Glycine max
GLYMA02G01740
I
0.756
Bra037419
Brassica rapa
Bra037419
I
0.755
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.755
MYB111
Arabidopsis thaliana
AT5G49330
D
0.755
gene05167-v1.0-hybrid
Fragaria vesca
gene05167-v1.0-hybrid
I
0.755
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.755
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.755
Bo7g092680
Brassica oleracea
Bo7g092680
I
0.755
TCM_021317
Theobroma cacao
TCM_021317
I
0.754
POPTR_0010s15090
Populus trichocarpa
POPTR_0010s15090
I
0.754
Gorai.007G124000
Gossypium raimondii
Gorai.007G124000
I
0.753
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.753
MYB11
Arabidopsis thaliana
AT3G62610
I
0.752
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.751
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.751
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.751
TRIUR3_05136
Triticum urartu
TRIUR3_05136
I
0.750
Pm008294
Prunus mume
Pm008294
I
0.748
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.747
Bo4g004500
Brassica oleracea
Bo4g004500
I
0.747
PK16958.1
Cannabis sativa
PK16958.1
I
0.744
GLYMA17G03480
Glycine max
GLYMA17G03480
I
0.744
SapurV1A.0050s0720
Salix purpurea
SapurV1A.0050s0720
I
0.744
MTR_4g121460
Medicago truncatula
MTR_4g121460
I
0.744
orange1.1g041081m.g
Citrus sinensis
orange1.1g041081m.g
I
0.744
Ciclev10005376m.g
Citrus clementina
Ciclev10005376m.g
I
0.744
ORUFI01G13920
Oryza rufipogon
ORUFI01G13920
I
0.741
BGIOSGA003345
Oryza indica
BGIOSGA003345
I
0.741
OGLUM01G14390
Oryza glumaepatula
OGLUM01G14390
I
0.741
OS01G0305900
Oryza sativa
OS01G0305900
I
0.741
F775_21522
Aegilops tauschii
F775_21522
I
0.741
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.740
Eucgr.A00200
Eucalyptus grandis
Eucgr.A00200
I
0.739
MTR_2g034790
Medicago truncatula
MTR_2g034790
I
0.739
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.739
Ca_03498
Cicer arietinum
Ca_03498
I
0.738
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.737
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.737
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.737
GLYMA07G37142
Glycine max
GLYMA07G37142
I
0.737
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.736
TCM_021318
Theobroma cacao
TCM_021318
I
0.735
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.735
F775_18434
Aegilops tauschii
F775_18434
I
0.735
evm.TU.supercontig_18.11
Carica papaya
evm.TU.supercontig_18.11
I
0.732
GLYMA15G15400
Glycine max
GLYMA15G15400
I
0.728
OB01G22640
Oryza brachyantha
OB01G22640
I
0.728
MTR_7g109320
Medicago truncatula
MTR_7g109320
I
0.728
Eucgr.H01058
Eucalyptus grandis
Eucgr.H01058
I
0.727
Gorai.011G195100
Gossypium raimondii
Gorai.011G195100
I
0.726
PDK_20s1388491g004
Phoenix dactylifera
PDK_20s1388491g004
I
0.725
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.722
Lus10002435.g
Linum usitatissimum
Lus10002435.g
I
0.721
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.721
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.721
evm.TU.supercontig_9.95
Carica papaya
evm.TU.supercontig_9.95
I
0.719
mgf003233m
Mimulus guttatus
mgf003233m
I
0.718
Bra000680
Brassica rapa
Bra000680
I
0.715
Bo3g044210
Brassica oleracea
Bo3g044210
I
0.715
Lus10010273.g
Linum usitatissimum
Lus10010273.g
I
0.713
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I
0.707
Aquca_028_00141
Aquilegia coerulea
Aquca_028_00141
I
0.706
gene09406-v1.0-hybrid
Fragaria vesca
gene09406-v1.0-hybrid
I
0.706
mgf024278m
Mimulus guttatus
mgf024278m
I
0.704
mgf012733m
Mimulus guttatus
mgf012733m
I
0.702
SapurV1A.0059s0160
Salix purpurea
SapurV1A.0059s0160
I
0.700
PRUPE_ppa011954mg
Prunus persica
PRUPE_ppa011954mg
I
0.700
Pm025102
Prunus mume
Pm025102
I
0.700
Pavir.J00442
Panicum virgatum
Pavir.J00442
I
0.699
Pm020104
Prunus mume
Pm020104
I
0.696
MDP0000209761
Malus domestica
MDP0000209761
I
0.695
Lus10001458.g
Linum usitatissimum
Lus10001458.g
I
0.695
Lus10016855.g
Linum usitatissimum
Lus10016855.g
I
0.695
ORGLA01G0099200
Oryza glaberrima
ORGLA01G0099200
I
0.693
OBART01G11800
Oryza barthii
OBART01G11800
I
0.693
ONIVA01G15380
Oryza nivara
ONIVA01G15380
I
0.693
TCM_037555
Theobroma cacao
TCM_037555
I
0.691
Pavir.Ca00231
Panicum virgatum
Pavir.Ca00231
I
0.690
Pavir.J00444
Panicum virgatum
Pavir.J00444
I
0.690
Lus10027459.g
Linum usitatissimum
Lus10027459.g
I
0.690
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.689
Lus10039214.g
Linum usitatissimum
Lus10039214.g
I
0.688
GLYMA19G40250
Glycine max
GLYMA19G40250
I
0.688
AtMYB10
Arabidopsis lyrata
fgenesh2_kg.3__1346__AT3G12820.1
I
0.686
VIT_05s0077g01360
Vitis vinifera
VIT_05s0077g01360
I
0.686
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.685
Pm029185
Prunus mume
Pm029185
I
0.684
POPTR_0003s14430
Populus trichocarpa
POPTR_0003s14430
I
0.683
VIT_19s0085g00050
Vitis vinifera
VIT_19s0085g00050
I
0.682
TCM_010839
Theobroma cacao
TCM_010839
I
0.682
MYB8
Arabidopsis thaliana
AT1G35515
I
0.682
POPTR_0005s09930
Populus trichocarpa
POPTR_0005s09930
I
0.682
AMTR_s00005p00268890
Amborella trichopoda
AMTR_s00005p00268890
I
0.682
Cucsa.096800
Cucumis sativus
Cucsa.096800
I
0.682
PRUPE_ppa007268mg
Prunus persica
PRUPE_ppa007268mg
I
0.681
PRUPE_ppa010846mg
Prunus persica
PRUPE_ppa010846mg
I
0.681
Pm018056
Prunus mume
Pm018056
I
0.681
Gorai.009G263200
Gossypium raimondii
Gorai.009G263200
I
0.679
Gorai.002G106300
Gossypium raimondii
Gorai.002G106300
I
0.678
Eucgr.B02896
Eucalyptus grandis
Eucgr.B02896
I
0.677
30169.m006322
Ricinus communis
30169.m006322
I
0.676
ORGLA03G0196700
Oryza glaberrima
ORGLA03G0196700
I
0.676
GRMZM2G160838
Zea mays
GRMZM2G160838
I
0.676
GRMZM2G041415
Zea mays
GRMZM2G041415
I
0.676
Gorai.002G180300
Gossypium raimondii
Gorai.002G180300
I
0.675
mgf005459m
Mimulus guttatus
mgf005459m
I
0.674
30068.m002544
Ricinus communis
30068.m002544
I
0.674
MDP0000211677
Malus domestica
MDP0000211677
I
0.674
SapurV1A.0163s0150
Salix purpurea
SapurV1A.0163s0150
I
0.673
POPTR_0010s12420
Populus trichocarpa
POPTR_0010s12420
I
0.673
VIT_01s0011g04760
Vitis vinifera
VIT_01s0011g04760
I
0.673
Bo3g091600
Brassica oleracea
Bo3g091600
I
0.672
Bra013055
Brassica rapa
Bra013055
I
0.672
MDP0000250597
Malus domestica
MDP0000250597
I
0.670
POPTR_0007s08190
Populus trichocarpa
POPTR_0007s08190
I
0.670
SELMODRAFT_450007
Selaginella moellendorffii
SELMODRAFT_450007
I
0.669
SELMODRAFT_120788
Selaginella moellendorffii
SELMODRAFT_120788
I
0.669
GRMZM2G084583
Zea mays
GRMZM2G084583
I
0.668
Thhalv10028861m.g
Eutrema salsugineum
Thhalv10028861m.g
I
0.667
SapurV1A.1985s0010
Salix purpurea
SapurV1A.1985s0010
I
0.667
SapurV1A.0277s0120
Salix purpurea
SapurV1A.0277s0120
I
0.667
Carubv10001860m.g
Capsella rubella
Carubv10001860m.g
I
0.667
MTR_1g100653
Medicago truncatula
MTR_1g100653
I
0.667
POPTR_0008s12750
Populus trichocarpa
POPTR_0008s12750
I
0.667
Gorai.008G179800
Gossypium raimondii
Gorai.008G179800
I
0.666
GSMUA_Achr5G03520_001
Musa acuminata
GSMUA_Achr5G03520_001
I
0.666
Solyc05g008250.1
Solanum lycopersicum
Solyc05g008250.1
I
0.666
PGSC0003DMG401023433
Solanum tuberosum
PGSC0003DMG401023433
I
0.666
GSMUA_Achr4G27350_001
Musa acuminata
GSMUA_Achr4G27350_001
I
0.666
LPERR06G07150
Leersia perrieri
LPERR06G07150
I
0.666
mgf018105m
Mimulus guttatus
mgf018105m
I
0.665
TCM_010778
Theobroma cacao
TCM_010778
I
0.665
MDP0000910638
Malus domestica
MDP0000910638
I
0.665
Lus10036453.g
Linum usitatissimum
Lus10036453.g
I
0.665
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.664
Pavir.J30990
Panicum virgatum
Pavir.J30990
I
0.664
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.663
Cla011528
Citrullus lanatus
Cla011528
I
0.663
GLYMA14G24500
Glycine max
GLYMA14G24500
I
0.663
SapurV1A.1276s0050
Salix purpurea
SapurV1A.1276s0050
I
0.663
GLYMA13G09980
Glycine max
GLYMA13G09980
I
0.663
POPTR_0003s21120
Populus trichocarpa
POPTR_0003s21120
I
0.663
HOS10
Arabidopsis lyrata
fgenesh2_kg.1__3635__AT1G35515.1
I
0.663
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
0.663
chr5.CM0148.360.nc
Lotus japonicus
chr5.CM0148.360.nc
I
0.663
SapurV1A.0081s0400
Salix purpurea
SapurV1A.0081s0400
I
0.663
MDP0000791870
Malus domestica
MDP0000791870
I
0.663
orange1.1g040726m.g
Citrus sinensis
orange1.1g040726m.g
I
0.663
evm.TU.supercontig_119.55
Carica papaya
evm.TU.supercontig_119.55
I
0.663
MDP0000723614
Malus domestica
MDP0000723614
I
0.663
GSMUA_Achr5G26000_001
Musa acuminata
GSMUA_Achr5G26000_001
I
0.663
Ciclev10015648m.g
Citrus clementina
Ciclev10015648m.g
I
0.663
Cucsa.304110
Cucumis sativus
Cucsa.304110
I
0.663
MDP0000655330
Malus domestica
MDP0000655330
I
0.663
cassava9274.m1
Manihot esculenta
cassava9274.m1
I
0.663
Bra007588
Brassica rapa
Bra007588
I
0.662
Si003965m.g
Setaria italica
Si003965m.g
I
0.662
Pavir.Fa00604
Panicum virgatum
Pavir.Fa00604
I
0.662
Carubv10012451m.g
Capsella rubella
Carubv10012451m.g
I
0.662
Si038905m.g
Setaria italica
Si038905m.g
I
0.662
PGSC0003DMG400030548
Solanum tuberosum
PGSC0003DMG400030548
I
0.662
Bo8g095790
Brassica oleracea
Bo8g095790
I
0.662
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.661