Cucsa.096800 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.096800 T284390_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.661 0.866
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.096800.1 Myb 14 52
Cucsa.096800.1 Myb 54 97

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla017646 Citrullus lanatus Cla017646 I 0.765
MDP0000119725 Malus domestica MDP0000119725 I 0.712
MDP0000607330 Malus domestica MDP0000607330 I 0.712
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.709
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.705
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.697
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.695
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.695
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.692
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.690
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.690
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.690
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.688
Ca_03498 Cicer arietinum Ca_03498 I 0.686
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.685
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.683
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.682
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.682
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.680
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.679
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.679
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.672
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.672
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.671
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.670
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.668
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.666
TCM_004777 Theobroma cacao TCM_004777 I 0.665
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.665
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.663
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.661
PK06182.1 Cannabis sativa PK06182.1 D 0.661