PK06182.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK06182.1 T290362_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06182.1
M02349_2.00		 Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.796 0.882
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02349_2.00 Myb 26 73
M02349_2.00 Myb 79 124

DNA Binding Domains

Protein ID Domain From To Sequence
PK06182.1 Myb 26 73
PK06182.1 Myb 79 124

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.848
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.848
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.844
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.838
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.835
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.830
MDP0000607330 Malus domestica MDP0000607330 I 0.820
MDP0000119725 Malus domestica MDP0000119725 I 0.820
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.820
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.817
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.816
Bo3g039690 Brassica oleracea Bo3g039690 I 0.815
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.811
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.811
TCM_004777 Theobroma cacao TCM_004777 I 0.811
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.808
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.807
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.807
Si039538m.g Setaria italica Si039538m.g I 0.807
Bra000453 Brassica rapa Bra000453 I 0.806
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.806
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.804
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.804
Si002107m.g Setaria italica Si002107m.g I 0.804
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.802
MYB12 Arabidopsis thaliana AT2G47460 I 0.802
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.797
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.797
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.797
MYB111 Arabidopsis thaliana AT5G49330 D 0.796
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.795
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.794
F775_11235 Aegilops tauschii F775_11235 I 0.794
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.794
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.794
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.794
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.794
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.794
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.791
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.790
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.790
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.789
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.788
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.788
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.786
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.786
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.786
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.786
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.785
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.785
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.785
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.784
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.783
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.783
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.783
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.783
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.782
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.782
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.782
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.782
OBART03G14380 Oryza barthii OBART03G14380 I 0.782
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.782
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.781
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.779
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.779
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.778
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.774
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.774
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.774
Bo4g004500 Brassica oleracea Bo4g004500 I 0.773
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.773
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.771
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.769
Ca_03498 Cicer arietinum Ca_03498 I 0.769
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.768
Cla009418 Citrullus lanatus Cla009418 I 0.766
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.766
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.765
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.765
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.765
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.765
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.763
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.763
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.761
Cla022107 Citrullus lanatus Cla022107 I 0.760
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.759
PK16958.1 Cannabis sativa PK16958.1 I 0.758
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.757
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.755
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.755
Cla017646 Citrullus lanatus Cla017646 I 0.754
Bra037419 Brassica rapa Bra037419 I 0.754
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.754
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.754
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.754
Bo7g092680 Brassica oleracea Bo7g092680 I 0.754
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.752
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.752
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.752
OS01G0305900 Oryza sativa OS01G0305900 I 0.752
MYB11 Arabidopsis thaliana AT3G62610 I 0.751
Pm008294 Prunus mume Pm008294 I 0.748
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.742
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.741
Bra036145 Brassica rapa Bra036145 I 0.739
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.739
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.738
Pm020104 Prunus mume Pm020104 I 0.738
TCM_021318 Theobroma cacao TCM_021318 I 0.735
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.734
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.734
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.734
OB03G24320 Oryza brachyantha OB03G24320 I 0.734
TCM_021317 Theobroma cacao TCM_021317 I 0.729
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.728
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.727
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.726
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.723
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.721
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.719
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.716
OB01G22640 Oryza brachyantha OB01G22640 I 0.714
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.714
mgf003233m Mimulus guttatus mgf003233m I 0.712
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.710
OBART01G11800 Oryza barthii OBART01G11800 I 0.704
ONIVA01G15380 Oryza nivara ONIVA01G15380 I 0.704
ORGLA01G0099200 Oryza glaberrima ORGLA01G0099200 I 0.704
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.702
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.702
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.701
PGSC0003DMG401023433 Solanum tuberosum PGSC0003DMG401023433 I 0.701
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.699
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.699
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.698
mgf024278m Mimulus guttatus mgf024278m I 0.697
Carubv10012451m.g Capsella rubella Carubv10012451m.g I 0.697
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.694
F775_21522 Aegilops tauschii F775_21522 I 0.693
MYB8 Arabidopsis thaliana AT1G35515 I 0.693
mgf003913m Mimulus guttatus mgf003913m I 0.692
mgf012733m Mimulus guttatus mgf012733m I 0.691
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.690
TCM_037555 Theobroma cacao TCM_037555 I 0.690
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.687
F775_18434 Aegilops tauschii F775_18434 I 0.687
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.685
TCM_011660 Theobroma cacao TCM_011660 I 0.684
Pm025102 Prunus mume Pm025102 I 0.684
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.681
Cla011528 Citrullus lanatus Cla011528 I 0.681
MDP0000209761 Malus domestica MDP0000209761 I 0.679
Bra000680 Brassica rapa Bra000680 I 0.677
Bo3g044210 Brassica oleracea Bo3g044210 I 0.677
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.676
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.676
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.670
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.670
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.670
POPTR_0019s00750 Populus trichocarpa POPTR_0019s00750 I 0.668
GSMUA_Achr11G04090_001 Musa acuminata GSMUA_Achr11G04090_001 I 0.668
Cagra.1383s0046 Capsella grandiflora Cagra.1383s0046 I 0.668
Carubv10005426m.g Capsella rubella Carubv10005426m.g I 0.668
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.668
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.668
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.668
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.666
TCM_015685 Theobroma cacao TCM_015685 I 0.665
Lus10009448.g Linum usitatissimum Lus10009448.g I 0.665
Gorai.009G263200 Gossypium raimondii Gorai.009G263200 I 0.665
Thhalv10022799m.g Eutrema salsugineum Thhalv10022799m.g I 0.664
Bra011576 Brassica rapa Bra011576 I 0.664
Carubv10014371m.g Capsella rubella Carubv10014371m.g I 0.664
Thhalv10025926m.g Eutrema salsugineum Thhalv10025926m.g I 0.664
Bostr.18351s0132 Boechera stricta Bostr.18351s0132 I 0.664
Bo3g091600 Brassica oleracea Bo3g091600 I 0.664
Bo7g117140 Brassica oleracea Bo7g117140 I 0.664
TCM_010778 Theobroma cacao TCM_010778 I 0.664
Cagra.1533s0005 Capsella grandiflora Cagra.1533s0005 I 0.664
Bra013055 Brassica rapa Bra013055 I 0.664
Bo1g006820 Brassica oleracea Bo1g006820 I 0.664
TCM_000535 Theobroma cacao TCM_000535 I 0.664
MYB7 Arabidopsis thaliana AT2G16720 I 0.664
Bra017685 Brassica rapa Bra017685 I 0.664
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.663
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.663
TCM_010839 Theobroma cacao TCM_010839 I 0.663
AMTR_s00005p00268890 Amborella trichopoda AMTR_s00005p00268890 I 0.663
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.663
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.661
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.661
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.661
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I 0.661
Cucsa.096800 Cucumis sativus Cucsa.096800 I 0.661
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.661
Cla013211 Citrullus lanatus Cla013211 I 0.661
MYB7 Arabidopsis lyrata scaffold_303957.1 I 0.661