chr5.CM0239.580.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr5.CM0239.580.nc T290732_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.782 0.871
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.773 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0239.580.nc Myb 14 61
chr5.CM0239.580.nc Myb 67 112

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.882
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.873
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.873
Ca_03498 Cicer arietinum Ca_03498 I 0.850
MDP0000607330 Malus domestica MDP0000607330 I 0.845
MDP0000119725 Malus domestica MDP0000119725 I 0.845
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.837
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.836
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.836
Cla022107 Citrullus lanatus Cla022107 I 0.835
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.835
TCM_021318 Theobroma cacao TCM_021318 I 0.834
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.834
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.829
Bo7g092680 Brassica oleracea Bo7g092680 I 0.824
Bra037419 Brassica rapa Bra037419 I 0.824
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.824
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.824
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.822
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.821
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.820
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.817
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.817
Pm008294 Prunus mume Pm008294 I 0.817
Cla017646 Citrullus lanatus Cla017646 I 0.817
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.815
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.814
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.813
TCM_004777 Theobroma cacao TCM_004777 I 0.812
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.811
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.809
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.809
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.808
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.808
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.808
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.808
Bra036145 Brassica rapa Bra036145 I 0.808
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.807
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.807
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.806
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.805
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.804
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.804
Si039538m.g Setaria italica Si039538m.g I 0.801
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.801
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.799
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.797
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.796
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.796
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.796
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.795
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.795
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.795
F775_11235 Aegilops tauschii F775_11235 I 0.795
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.795
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.795
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.793
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.792
mgf024278m Mimulus guttatus mgf024278m I 0.791
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.790
Cla009418 Citrullus lanatus Cla009418 I 0.788
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.787
Bo3g039690 Brassica oleracea Bo3g039690 I 0.786
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.784
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.784
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.783
MYB111 Arabidopsis thaliana AT5G49330 D 0.782
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.781
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.780
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.777
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.777
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.777
Bra000453 Brassica rapa Bra000453 I 0.777
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.777
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.775
PK06182.1 Cannabis sativa PK06182.1 D 0.773
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.773
MYB12 Arabidopsis thaliana AT2G47460 I 0.773
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.772
PK16958.1 Cannabis sativa PK16958.1 I 0.772
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.772
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.772
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.771
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.769
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.769
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.769
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.768
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.768
TCM_021317 Theobroma cacao TCM_021317 I 0.768
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.767
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.766
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.765
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.765
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.764
Pm020104 Prunus mume Pm020104 I 0.764
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.762
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.761
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.761
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.760
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.760
Si002107m.g Setaria italica Si002107m.g I 0.760
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.760
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.760
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.760
OBART03G14380 Oryza barthii OBART03G14380 I 0.760
TCM_037555 Theobroma cacao TCM_037555 I 0.759
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.757
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.756
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.755
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.755
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.752
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.748
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.746
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.746
mgf003233m Mimulus guttatus mgf003233m I 0.746
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.745
Bo4g004500 Brassica oleracea Bo4g004500 I 0.744
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.743
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.732
mgf012733m Mimulus guttatus mgf012733m I 0.730
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.730
OB03G24320 Oryza brachyantha OB03G24320 I 0.729
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.728
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.727
F775_18434 Aegilops tauschii F775_18434 I 0.718
TCM_010778 Theobroma cacao TCM_010778 I 0.716
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.712
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.712
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.712
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.708
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.708
OS01G0305900 Oryza sativa OS01G0305900 I 0.708
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.708
Lus10036453.g Linum usitatissimum Lus10036453.g I 0.706
TCM_004509 Theobroma cacao TCM_004509 I 0.703
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.702
Cla011528 Citrullus lanatus Cla011528 I 0.702
30068.m002544 Ricinus communis 30068.m002544 I 0.701
MYB11 Arabidopsis thaliana AT3G62610 I 0.701
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.699
OB01G22640 Oryza brachyantha OB01G22640 I 0.698
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.697
MDP0000210851 Malus domestica MDP0000210851 I 0.697
MDP0000031172 Malus domestica MDP0000031172 I 0.697
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.697
Pm005570 Prunus mume Pm005570 I 0.697
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.697
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I 0.696
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I 0.696
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.694
TCM_037376 Theobroma cacao TCM_037376 I 0.694
GRMZM2G084583 Zea mays GRMZM2G084583 I 0.694
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.694
F775_21522 Aegilops tauschii F775_21522 I 0.693
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.692
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.692
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.690
F775_42516 Aegilops tauschii F775_42516 I 0.690
Cucsa.096800 Cucumis sativus Cucsa.096800 I 0.690
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.689
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.688
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.688
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.688
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.688
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.687
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.686
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.686
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.684
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.684
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.684
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.684
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.684
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.684
Gorai.003G054100 Gossypium raimondii Gorai.003G054100 I 0.682
Lus10027459.g Linum usitatissimum Lus10027459.g I 0.682
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.681
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.681
Lus10039214.g Linum usitatissimum Lus10039214.g I 0.680
BGIOSGA026525 Oryza indica BGIOSGA026525 I 0.680
GSMUA_Achr10G16010_001 Musa acuminata GSMUA_Achr10G16010_001 I 0.680
BGIOSGA026527 Oryza indica BGIOSGA026527 I 0.680
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.680
OB08G29560 Oryza brachyantha OB08G29560 I 0.680
ORGLA08G0216900 Oryza glaberrima ORGLA08G0216900 I 0.680
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.680
ORUFI08G25300 Oryza rufipogon ORUFI08G25300 I 0.680
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.680
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.679
GRMZM2G419239 Zea mays GRMZM2G419239 I 0.679
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.677
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.677
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.677
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.676
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.676
TCM_037379 Theobroma cacao TCM_037379 I 0.675
Pm018338 Prunus mume Pm018338 I 0.674
Pavir.J16675 Panicum virgatum Pavir.J16675 I 0.674
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.674
Pavir.J11802 Panicum virgatum Pavir.J11802 I 0.674
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.673
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.673
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.673
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.673
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.673
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.673
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.671
MDP0000915330 Malus domestica MDP0000915330 I 0.671
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.671
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.671
GSMUA_Achr2G20600_001 Musa acuminata GSMUA_Achr2G20600_001 I 0.671
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.671
PK14784.1 Cannabis sativa PK14784.1 I 0.671
PK23594.1 Cannabis sativa PK23594.1 I 0.671
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.671
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.671
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.670
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.669
GSMUA_Achr6G12930_001 Musa acuminata GSMUA_Achr6G12930_001 I 0.668
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.667
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.667
Pm005571 Prunus mume Pm005571 I 0.667
Pm025102 Prunus mume Pm025102 I 0.667
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.667
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.667
MDP0000157940 Malus domestica MDP0000157940 I 0.667
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.667
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.667
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.666
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.666
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.666
TCM_011660 Theobroma cacao TCM_011660 I 0.665
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.665
Sb07g024890 Sorghum bicolor Sb07g024890 I 0.665
TCM_000535 Theobroma cacao TCM_000535 I 0.665
OB06G16110 Oryza brachyantha OB06G16110 I 0.665
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.664
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.664
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.664
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.664
Ca_03154 Cicer arietinum Ca_03154 I 0.664
Bo3g044210 Brassica oleracea Bo3g044210 I 0.663
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.663
Bra000680 Brassica rapa Bra000680 I 0.663
TCM_037559 Theobroma cacao TCM_037559 I 0.663
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.662
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.662
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.662
Cucsa.370600 Cucumis sativus Cucsa.370600 I 0.662
Cla016084 Citrullus lanatus Cla016084 I 0.662
MDP0000209761 Malus domestica MDP0000209761 I 0.662
MYB8 Arabidopsis thaliana AT1G35515 I 0.661
GSMUA_Achr11G07180_001 Musa acuminata GSMUA_Achr11G07180_001 I 0.661
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.661