CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400009033
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400009033
T277577_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.848
0.882
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.795
0.871
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400023321
Myb
14
61
RGRWTAEEDQILTNYILSNGEGSWRSLPKNAGLLRCGKSCRLRWINYL
PGSC0003DMT400023321
Myb
67
112
RGNITSQEEDIIIKLHATLGNRWSLIAGHLSGRTDNEIKNYWNSHL
PGSC0003DMT400023322
Myb
14
61
RGRWTAEEDQILTNYILSNGEGSWRSLPKNAGLLRCGKSCRLRWINYL
PGSC0003DMT400023322
Myb
67
112
RGNITSQEEDIIIKLHATLGNRWSLIAGHLSGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
171 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc01g079620.2
Solanum lycopersicum
Solyc01g079620.2
I
0.905
PK06182.1
Cannabis sativa
PK06182.1
D
0.848
Thhalv10001498m.g
Eutrema salsugineum
Thhalv10001498m.g
I
0.843
Sb01g037670
Sorghum bicolor
Sb01g037670
I
0.830
Bo3g039690
Brassica oleracea
Bo3g039690
I
0.828
MYB12
Arabidopsis thaliana
AT2G47460
I
0.823
MYB12
Arabidopsis lyrata
fgenesh2_kg.4__2983__AT2G47460.1
I
0.823
Bra000453
Brassica rapa
Bra000453
I
0.819
GSMUA_AchrUn_randomG12700_001
Musa acuminata
GSMUA_AchrUn_randomG12700_001
I
0.819
Bostr.25993s0011
Boechera stricta
Bostr.25993s0011
I
0.819
GRMZM2G084799
Zea mays
GRMZM2G084799
I
0.811
GRMZM2G057027
Zea mays
GRMZM2G057027
I
0.811
Solyc06g009710.2
Solanum lycopersicum
Solyc06g009710.2
I
0.809
Bostr.13158s0261
Boechera stricta
Bostr.13158s0261
I
0.808
Thhalv10006080m.g
Eutrema salsugineum
Thhalv10006080m.g
I
0.803
ATMYB11
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002710
I
0.803
GSMUA_Achr5G21250_001
Musa acuminata
GSMUA_Achr5G21250_001
I
0.802
Si039538m.g
Setaria italica
Si039538m.g
I
0.802
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
0.802
Pavir.Ib01420
Panicum virgatum
Pavir.Ib01420
I
0.802
PGSC0003DMG400007304
Solanum tuberosum
PGSC0003DMG400007304
I
0.800
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.799
MLOC_57220
Hordeum vulgare
MLOC_57220
I
0.799
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.799
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.799
F775_11235
Aegilops tauschii
F775_11235
I
0.799
MYB111
Arabidopsis thaliana
AT5G49330
D
0.795
GRMZM2G022686
Zea mays
GRMZM2G022686
I
0.793
MDP0000607330
Malus domestica
MDP0000607330
I
0.793
MDP0000119725
Malus domestica
MDP0000119725
I
0.793
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.787
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.786
Bo4g004500
Brassica oleracea
Bo4g004500
I
0.786
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.785
BRADI1G64687
Brachypodium distachyon
BRADI1G64687
I
0.783
Cagra.13170s0007
Capsella grandiflora
Cagra.13170s0007
I
0.782
Carubv10019345m.g
Capsella rubella
Carubv10019345m.g
I
0.782
GLYMA17G03480
Glycine max
GLYMA17G03480
I
0.780
MTR_4g121460
Medicago truncatula
MTR_4g121460
I
0.780
BRADI2G11676
Brachypodium distachyon
BRADI2G11676
I
0.779
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.778
LPERR03G12690
Leersia perrieri
LPERR03G12690
I
0.777
PGSC0003DMG400004371
Solanum tuberosum
PGSC0003DMG400004371
I
0.776
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.774
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.774
GLYMA07G37142
Glycine max
GLYMA07G37142
I
0.774
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.773
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.771
Si002107m.g
Setaria italica
Si002107m.g
I
0.769
chr5.CM0239.580.nc
Lotus japonicus
chr5.CM0239.580.nc
I
0.769
Cucsa.069500
Cucumis sativus
Cucsa.069500
I
0.769
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.769
Cla009418
Citrullus lanatus
Cla009418
I
0.769
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.768
Aquca_003_00583
Aquilegia coerulea
Aquca_003_00583
I
0.768
TCM_004777
Theobroma cacao
TCM_004777
I
0.768
Solyc12g049350.1
Solanum lycopersicum
Solyc12g049350.1
I
0.767
MTR_2g034790
Medicago truncatula
MTR_2g034790
I
0.767
Cucsa.252700
Cucumis sativus
Cucsa.252700
I
0.767
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.766
GLYMA15G15400
Glycine max
GLYMA15G15400
I
0.765
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.765
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.765
Cla022107
Citrullus lanatus
Cla022107
I
0.764
MTR_7g109320
Medicago truncatula
MTR_7g109320
I
0.764
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.761
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
0.760
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
0.760
OBART03G14380
Oryza barthii
OBART03G14380
I
0.760
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
0.760
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
0.760
PRUPE_ppa007594mg
Prunus persica
PRUPE_ppa007594mg
I
0.758
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.755
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.754
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.754
Bra037419
Brassica rapa
Bra037419
I
0.754
gene05167-v1.0-hybrid
Fragaria vesca
gene05167-v1.0-hybrid
I
0.754
Bo7g092680
Brassica oleracea
Bo7g092680
I
0.754
GRMZM2G051256
Zea mays
GRMZM2G051256
I
0.753
PK16958.1
Cannabis sativa
PK16958.1
I
0.753
cassava40469.m1
Manihot esculenta
cassava40469.m1
I
0.752
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.752
Gorai.008G141000
Gossypium raimondii
Gorai.008G141000
I
0.752
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.750
GLYMA02G01740
Glycine max
GLYMA02G01740
I
0.749
Ca_03498
Cicer arietinum
Ca_03498
I
0.747
Gorai.007G124000
Gossypium raimondii
Gorai.007G124000
I
0.747
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.747
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
0.747
Pm008294
Prunus mume
Pm008294
I
0.747
Traes_1DS_711044AD5
Triticum aestivum
Traes_1DS_711044AD5
I
0.746
Aquca_028_00141
Aquilegia coerulea
Aquca_028_00141
I
0.743
orange1.1g041081m.g
Citrus sinensis
orange1.1g041081m.g
I
0.743
Ciclev10005376m.g
Citrus clementina
Ciclev10005376m.g
I
0.743
Eucgr.A00200
Eucalyptus grandis
Eucgr.A00200
I
0.741
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.740
BGIOSGA003345
Oryza indica
BGIOSGA003345
I
0.738
ORUFI01G13920
Oryza rufipogon
ORUFI01G13920
I
0.738
OS01G0305900
Oryza sativa
OS01G0305900
I
0.738
Bra036145
Brassica rapa
Bra036145
I
0.738
OGLUM01G14390
Oryza glumaepatula
OGLUM01G14390
I
0.738
Cla017646
Citrullus lanatus
Cla017646
I
0.736
MYB11
Arabidopsis thaliana
AT3G62610
I
0.734
TCM_021318
Theobroma cacao
TCM_021318
I
0.734
TRIUR3_05136
Triticum urartu
TRIUR3_05136
I
0.731
Pm020104
Prunus mume
Pm020104
I
0.730
OB03G24320
Oryza brachyantha
OB03G24320
I
0.729
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.729
TCM_021317
Theobroma cacao
TCM_021317
I
0.728
Lus10010273.g
Linum usitatissimum
Lus10010273.g
I
0.718
Gorai.011G195100
Gossypium raimondii
Gorai.011G195100
I
0.718
Lus10001458.g
Linum usitatissimum
Lus10001458.g
I
0.716
evm.TU.supercontig_9.95
Carica papaya
evm.TU.supercontig_9.95
I
0.715
ORGLA03G0138900
Oryza glaberrima
ORGLA03G0138900
I
0.712
OGLUM03G14490
Oryza glumaepatula
OGLUM03G14490
I
0.712
POPTR_0010s15090
Populus trichocarpa
POPTR_0010s15090
I
0.712
Lus10036453.g
Linum usitatissimum
Lus10036453.g
I
0.704
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.704
Lus10002435.g
Linum usitatissimum
Lus10002435.g
I
0.703
TCM_037555
Theobroma cacao
TCM_037555
I
0.703
Eucgr.H01058
Eucalyptus grandis
Eucgr.H01058
I
0.703
evm.TU.supercontig_18.11
Carica papaya
evm.TU.supercontig_18.11
I
0.702
PGSC0003DMG401023433
Solanum tuberosum
PGSC0003DMG401023433
I
0.701
SapurV1A.0050s0720
Salix purpurea
SapurV1A.0050s0720
I
0.701
OB01G22640
Oryza brachyantha
OB01G22640
I
0.700
F775_21522
Aegilops tauschii
F775_21522
I
0.697
PDK_20s1388491g004
Phoenix dactylifera
PDK_20s1388491g004
I
0.696
Lus10016855.g
Linum usitatissimum
Lus10016855.g
I
0.695
Pavir.J00442
Panicum virgatum
Pavir.J00442
I
0.693
Aquca_073_00013
Aquilegia coerulea
Aquca_073_00013
I
0.693
TCM_011660
Theobroma cacao
TCM_011660
I
0.692
F775_18434
Aegilops tauschii
F775_18434
I
0.691
ONIVA01G15380
Oryza nivara
ONIVA01G15380
I
0.690
ORGLA01G0099200
Oryza glaberrima
ORGLA01G0099200
I
0.690
OBART01G11800
Oryza barthii
OBART01G11800
I
0.690
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.685
mgf003233m
Mimulus guttatus
mgf003233m
I
0.685
VIT_05s0077g01360
Vitis vinifera
VIT_05s0077g01360
I
0.685
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.685
evm.TU.supercontig_28.71
Carica papaya
evm.TU.supercontig_28.71
I
0.682
GLYMA19G40250
Glycine max
GLYMA19G40250
I
0.682
HOS10
Arabidopsis lyrata
fgenesh2_kg.1__3635__AT1G35515.1
I
0.681
Carubv10012451m.g
Capsella rubella
Carubv10012451m.g
I
0.680
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.678
TCM_010778
Theobroma cacao
TCM_010778
I
0.677
Cagra.9781s0007
Capsella grandiflora
Cagra.9781s0007
I
0.677
MYB8
Arabidopsis thaliana
AT1G35515
I
0.676
mgf003913m
Mimulus guttatus
mgf003913m
I
0.675
SELMODRAFT_120788
Selaginella moellendorffii
SELMODRAFT_120788
I
0.673
TCM_015685
Theobroma cacao
TCM_015685
I
0.673
SELMODRAFT_450007
Selaginella moellendorffii
SELMODRAFT_450007
I
0.673
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.673
Cla011528
Citrullus lanatus
Cla011528
I
0.672
Ca_03154
Cicer arietinum
Ca_03154
I
0.672
mgf024278m
Mimulus guttatus
mgf024278m
I
0.671
TCM_037379
Theobroma cacao
TCM_037379
I
0.671
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.670
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I
0.670
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.669
mgf012733m
Mimulus guttatus
mgf012733m
I
0.669
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.668
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.667
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.666
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.665
TCM_037559
Theobroma cacao
TCM_037559
I
0.665
TCM_004509
Theobroma cacao
TCM_004509
I
0.664
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.662
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.661
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.661
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.661