CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LPERR03G12690
(
Leersia perrieri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
LPERR03G12690
T273687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.782
0.860
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.755
0.828
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR03G12690.1
Myb
14
61
RGRWTAEEDERLAGYIAKHGEGSWRSLPKNAGLLRCGKSCRLRWINYL
LPERR03G12690.1
Myb
67
112
RGNIAKEEEDVIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHL
LPERR03G12690.2
Myb
14
61
RGRWTAEEDERLAGYIAKHGEGSWRSLPKNAGLLRCGKSCRLRWINYL
LPERR03G12690.2
Myb
67
140
RGNIAKEEEDVIIKLHATLGNRYADRSTSSHFLLCFCCFLFLIMQMPISEWSLIASHLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Leersia perrieri
TFs
231 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy