Lus10016855.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10016855.g T287996_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.718 0.860
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN

NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.699 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016855 Myb 14 61
Lus10016855 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK06182.1 Cannabis sativa PK06182.1 D 0.699
MYB111 Arabidopsis thaliana AT5G49330 D 0.718
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.785
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.742
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.670
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.720
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.694
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.742
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.694
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.720
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.694
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.714
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.711
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.716
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.672
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.766
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.698
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.721
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.707
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.663
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.709
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.691
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.705
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.699
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.666
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.709
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.694
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.693
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.696
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.661
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.711
mgf024278m Mimulus guttatus mgf024278m I 0.681
mgf003233m Mimulus guttatus mgf003233m I 0.665
Pm005572 Prunus mume Pm005572 I 0.684
Pm005571 Prunus mume Pm005571 I 0.666
Pm005570 Prunus mume Pm005570 I 0.717
Cla022107 Citrullus lanatus Cla022107 I 0.703
Cla017646 Citrullus lanatus Cla017646 I 0.689
Cla011528 Citrullus lanatus Cla011528 I 0.716
Cla009418 Citrullus lanatus Cla009418 I 0.712
Ca_03498 Cicer arietinum Ca_03498 I 0.692
Ca_03154 Cicer arietinum Ca_03154 I 0.714
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.696
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.700
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.703
Pm008294 Prunus mume Pm008294 I 0.761
Pm013279 Prunus mume Pm013279 I 0.683
Pm020104 Prunus mume Pm020104 I 0.676
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.692
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.709
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.712
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.693
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.804
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.695
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.714
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.673
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.703
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.698
28226.m000839 Ricinus communis 28226.m000839 I 0.676
Pm027047 Prunus mume Pm027047 I 0.696
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.707
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.679
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.677
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.665
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.662
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.717
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.665
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.662
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.704
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.681
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.771
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.720
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.689
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.766
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.691
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.714
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.694
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.709
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.702
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.691
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.716
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.730
PK27708.1 Cannabis sativa PK27708.1 I 0.670
PK20358.1 Cannabis sativa PK20358.1 I 0.674
PK16958.1 Cannabis sativa PK16958.1 I 0.767
PK16315.1 Cannabis sativa PK16315.1 I 0.700
PK14811.1 Cannabis sativa PK14811.1 I 0.662
PK11717.1 Cannabis sativa PK11717.1 I 0.685
PK08038.1 Cannabis sativa PK08038.1 I 0.683
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.729
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.721
MDP0000607330 Malus domestica MDP0000607330 I 0.722
MDP0000437717 Malus domestica MDP0000437717 I 0.679
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.723
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.718
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.663
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.662
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.701
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.724
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.681
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.726
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.689
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.706
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.697
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.687
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.666
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.772
Gorai.013G088200 Gossypium raimondii Gorai.013G088200 I 0.666
MDP0000318013 Malus domestica MDP0000318013 I 0.662
MDP0000210851 Malus domestica MDP0000210851 I 0.714
MDP0000184538 Malus domestica MDP0000184538 I 0.700
MDP0000145050 Malus domestica MDP0000145050 I 0.674
MDP0000135594 Malus domestica MDP0000135594 I 0.678
MDP0000119725 Malus domestica MDP0000119725 I 0.722
MDP0000031172 Malus domestica MDP0000031172 I 0.717
Lus10036453.g Linum usitatissimum Lus10036453.g I 0.773
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.684
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.695
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.709
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.693
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.661
OB06G16110 Oryza brachyantha OB06G16110 I 0.681
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.678
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.702
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.678
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.704
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.704
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.697
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.672
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.712
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.686
GLYMA19G43740 Glycine max GLYMA19G43740 I 0.675
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.671
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.663
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.728
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.680
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.737
OB03G30160 Oryza brachyantha OB03G30160 I 0.688
OB03G24320 Oryza brachyantha OB03G24320 I 0.695
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.684
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.702
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.728
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.728
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.753
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.695
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.713
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.713
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.702
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.730
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.711
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.714
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.722
Bra036145 Brassica rapa Bra036145 I 0.709
Bra035532 Brassica rapa Bra035532 I 0.694
Bra000453 Brassica rapa Bra000453 I 0.714
Bo8g030520 Brassica oleracea Bo8g030520 I 0.694
Bo7g092680 Brassica oleracea Bo7g092680 I 0.742
Bo4g004500 Brassica oleracea Bo4g004500 I 0.681
Bo3g039690 Brassica oleracea Bo3g039690 I 0.705
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.661
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.661
TT2 Arabidopsis thaliana AT5G35550 I 0.694
MYB12 Arabidopsis thaliana AT2G47460 I 0.714
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.710
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.701
Bra037419 Brassica rapa Bra037419 I 0.742
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.720
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.663
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.696
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.722
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.722
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.705
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.690
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.741
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.694
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.714
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.720
F775_18434 Aegilops tauschii F775_18434 I 0.684
F775_11235 Aegilops tauschii F775_11235 I 0.723
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.695
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.687
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.712
TCM_014091 Theobroma cacao TCM_014091 I 0.673
TCM_010778 Theobroma cacao TCM_010778 I 0.717
TCM_004777 Theobroma cacao TCM_004777 I 0.708
TCM_004509 Theobroma cacao TCM_004509 I 0.705
TCM_000535 Theobroma cacao TCM_000535 I 0.717
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.685
Solyc08g082890.2 Solanum lycopersicum Solyc08g082890.2 I 0.668
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.678
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.695
Si039538m.g Setaria italica Si039538m.g I 0.720
Si038905m.g Setaria italica Si038905m.g I 0.700
Si002107m.g Setaria italica Si002107m.g I 0.705
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.718
TCM_021317 Theobroma cacao TCM_021317 I 0.691
TCM_021318 Theobroma cacao TCM_021318 I 0.774
VIT_05s0049g01020 Vitis vinifera VIT_05s0049g01020 I 0.662
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.695
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.661
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.714
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.723
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.696
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.723
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.723
TCM_037559 Theobroma cacao TCM_037559 I 0.713
TCM_037555 Theobroma cacao TCM_037555 I 0.666
TCM_037379 Theobroma cacao TCM_037379 I 0.712
TCM_037377 Theobroma cacao TCM_037377 I 0.680
TCM_037376 Theobroma cacao TCM_037376 I 0.714
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.705
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.730
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.683
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.669
OS01G0305900 Oryza sativa OS01G0305900 I 0.661
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.681
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.661
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.661
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.681
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.695
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.717
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.695
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.661
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.661
OGLUM03G21860 Oryza glumaepatula OGLUM03G21860 I 0.669
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.661
OBART03G14380 Oryza barthii OBART03G14380 I 0.661
PGSC0003DMG400012126 Solanum tuberosum PGSC0003DMG400012126 I 0.668
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.696
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.671
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.685
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.684
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.717
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.686
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.772
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.731
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.701
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.782
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.717
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.665
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.701
Gorai.001G020500 Gossypium raimondii Gorai.001G020500 N 0.673