CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0876s0043
(
Capsella grandiflora
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cagra.0876s0043
T285992_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0876s0043.1.p
Myb
1
24
WSAIARRLPGRTDNEIKNHWNTHI
Links
Other
Myb/SANT
family TFs
Other
Capsella grandiflora
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.5789s0001
Capsella grandiflora
Cagra.5789s0001
N
0.897
PDK_20s1922781g001
Phoenix dactylifera
PDK_20s1922781g001
N
0.897
LjSGA_014958.1
Lotus japonicus
LjSGA_014958.1
N
0.883
LjSGA_057664.1
Lotus japonicus
LjSGA_057664.1
N
0.869
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
0.859
Traes_7DS_76515C538
Triticum aestivum
Traes_7DS_76515C538
N
0.858
mgf023771m
Mimulus guttatus
mgf023771m
N
0.854
chr1.CM0600.120.nd
Lotus japonicus
chr1.CM0600.120.nd
N
0.853
POPTR_0017s10780
Populus trichocarpa
POPTR_0017s10780
N
0.849
LjSGA_057038.1
Lotus japonicus
LjSGA_057038.1
N
0.845
MLOC_39554
Hordeum vulgare
MLOC_39554
I
0.844
Pm000007
Prunus mume
Pm000007
N
0.843
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.843
mgf018056m
Mimulus guttatus
mgf018056m
N
0.843
Pavir.J25377
Panicum virgatum
Pavir.J25377
N
0.840
LjSGA_034303.1
Lotus japonicus
LjSGA_034303.1
N
0.838
Traes_7AS_FD974A17F
Triticum aestivum
Traes_7AS_FD974A17F
N
0.837
OB06G28240
Oryza brachyantha
OB06G28240
N
0.837
Eucgr.B03766
Eucalyptus grandis
Eucgr.B03766
N
0.837
Pavir.Db00878
Panicum virgatum
Pavir.Db00878
N
0.837
TCM_041010
Theobroma cacao
TCM_041010
I
0.837
Pavir.Eb02286
Panicum virgatum
Pavir.Eb02286
N
0.833
CM0385.220.nd
Lotus japonicus
CM0385.220.nd
N
0.833
Pavir.J14839
Panicum virgatum
Pavir.J14839
N
0.833
cassava45648.m1
Manihot esculenta
cassava45648.m1
N
0.833
Traes_7AS_ADDEF000C
Triticum aestivum
Traes_7AS_ADDEF000C
N
0.825
MTR_1g087540
Medicago truncatula
MTR_1g087540
N
0.822
ORGLA02G0219000
Oryza glaberrima
ORGLA02G0219000
N
0.814
Ca_10215
Cicer arietinum
Ca_10215
N
0.812
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.811
Bostr.13129s0196
Boechera stricta
Bostr.13129s0196
I
0.811
Gorai.008G086400
Gossypium raimondii
Gorai.008G086400
I
0.798
PK21717.1
Cannabis sativa
PK21717.1
N
0.798
chr5.CM0071.390.nd
Lotus japonicus
chr5.CM0071.390.nd
N
0.795
F775_42755
Aegilops tauschii
F775_42755
N
0.792
MYB3
Arabidopsis thaliana
AT1G22640
D
0.786
cassava2662.m1
Manihot esculenta
cassava2662.m1
N
0.770
Bo8g104180
Brassica oleracea
Bo8g104180
N
0.754
Traes_5AS_D238844BB
Triticum aestivum
Traes_5AS_D238844BB
N
0.753
mgf020736m
Mimulus guttatus
mgf020736m
N
0.752
e_gw1.1.4.1
Physcomitrella patens
e_gw1.1.4.1
N
0.752
AMTR_s00009p00257950
Amborella trichopoda
AMTR_s00009p00257950
N
0.748
PK00358.1
Cannabis sativa
PK00358.1
N
0.747
mgf017705m
Mimulus guttatus
mgf017705m
N
0.745
ATMYB16
Arabidopsis thaliana
AT5G15310
I
0.743
Gorai.012G186500
Gossypium raimondii
Gorai.012G186500
I
0.743
OS04G0517100
Oryza sativa
OS04G0517100
N
0.743
evm.TU.supercontig_34.3
Carica papaya
evm.TU.supercontig_34.3
N
0.741
MDP0000911051
Malus domestica
MDP0000911051
N
0.737
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.737
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.737
MDP0000413041
Malus domestica
MDP0000413041
N
0.736
Traes_3DL_D9A29948B
Triticum aestivum
Traes_3DL_D9A29948B
N
0.734
Traes_3AL_F09C7CA19
Triticum aestivum
Traes_3AL_F09C7CA19
N
0.734
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.734
MLOC_71332
Hordeum vulgare
MLOC_71332
N
0.734
BGIOSGA010548
Oryza indica
BGIOSGA010548
N
0.733
Solyc03g098270.1
Solanum lycopersicum
Solyc03g098270.1
N
0.731
Bra024685
Brassica rapa
Bra024685
N
0.731
Bo4g198650
Brassica oleracea
Bo4g198650
N
0.729
AMTR_s00057p00069720
Amborella trichopoda
AMTR_s00057p00069720
N
0.729
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.726
MDP0000879675
Malus domestica
MDP0000879675
N
0.724
PGSC0003DMG400014550
Solanum tuberosum
PGSC0003DMG400014550
I
0.724
evm.TU.supercontig_1.55
Carica papaya
evm.TU.supercontig_1.55
N
0.721
30128.m008990
Ricinus communis
30128.m008990
N
0.721
mg021480m
Mimulus guttatus
mg021480m
N
0.720
Ciclev10023519m.g
Citrus clementina
Ciclev10023519m.g
N
0.717
MLOC_12474
Hordeum vulgare
MLOC_12474
N
0.715
AMTR_s00087p00039380
Amborella trichopoda
AMTR_s00087p00039380
N
0.713
Traes_6AL_C0A2B4F041
Triticum aestivum
Traes_6AL_C0A2B4F041
N
0.712
PK15577.1
Cannabis sativa
PK15577.1
N
0.711
OS05G0350900
Oryza sativa
OS05G0350900
N
0.710
AtMYB41
Arabidopsis thaliana
AT4G28110
D
0.701
GLYMA0041S00310
Glycine max
GLYMA0041S00310
I
0.701
GLYMA05G03780
Glycine max
GLYMA05G03780
I
0.701
30147.m014198
Ricinus communis
30147.m014198
N
0.701
OLONG_025203
Oryza longistaminata
OLONG_025203
N
0.694
Cucsa.051050
Cucumis sativus
Cucsa.051050
I
0.693
MYB60
Arabidopsis thaliana
AT1G08810
D
0.690
SapurV1A.0006s0790
Salix purpurea
SapurV1A.0006s0790
I
0.690
SapurV1A.0021s0930
Salix purpurea
SapurV1A.0021s0930
I
0.690
orange1.1g019307m.g
Citrus sinensis
orange1.1g019307m.g
I
0.690
Gorai.001G024300
Gossypium raimondii
Gorai.001G024300
I
0.687
SapurV1A.0890s0050
Salix purpurea
SapurV1A.0890s0050
I
0.687
GLYMA14G10483
Glycine max
GLYMA14G10483
I
0.687
SapurV1A.3377s0010
Salix purpurea
SapurV1A.3377s0010
I
0.687
SapurV1A.1876s0010
Salix purpurea
SapurV1A.1876s0010
N
0.686
SapurV1A.0876s0040
Salix purpurea
SapurV1A.0876s0040
I
0.683
Gorai.001G239000
Gossypium raimondii
Gorai.001G239000
I
0.683
MDP0000158409
Malus domestica
MDP0000158409
N
0.682
GLYMA16G16170
Glycine max
GLYMA16G16170
N
0.682
LjSGA_064890.1.1
Lotus japonicus
LjSGA_064890.1.1
N
0.681
AMTR_s00133p00075670
Amborella trichopoda
AMTR_s00133p00075670
N
0.676
PK22972.1
Cannabis sativa
PK22972.1
N
0.671
F775_20859
Aegilops tauschii
F775_20859
N
0.669
Pavir.Ia03786
Panicum virgatum
Pavir.Ia03786
N
0.669
Pm015551
Prunus mume
Pm015551
N
0.666
OS05G0132700
Oryza sativa
OS05G0132700
N
0.664
Pavir.Eb00654
Panicum virgatum
Pavir.Eb00654
I
0.664
mgf021965m
Mimulus guttatus
mgf021965m
N
0.664
Pavir.J11191
Panicum virgatum
Pavir.J11191
N
0.664
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.662