CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000879675
(
Malus domestica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
MDP0000879675
T288735_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000879675
Myb
2
27
LGWSKIAEYLPGRTDNEIKNYWRTRV
Links
Other
Myb/SANT
family TFs
Other
Malus domestica
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400014550
Solanum tuberosum
PGSC0003DMG400014550
I
0.778
POPTR_0017s10780
Populus trichocarpa
POPTR_0017s10780
N
0.758
OS05G0132700
Oryza sativa
OS05G0132700
N
0.736
PK22972.1
Cannabis sativa
PK22972.1
N
0.734
LjSGA_057664.1
Lotus japonicus
LjSGA_057664.1
N
0.729
Cagra.5789s0001
Capsella grandiflora
Cagra.5789s0001
N
0.728
PDK_20s1922781g001
Phoenix dactylifera
PDK_20s1922781g001
N
0.728
Traes_7DS_76515C538
Triticum aestivum
Traes_7DS_76515C538
N
0.727
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.726
cassava15703.m1
Manihot esculenta
cassava15703.m1
N
0.724
LjSGA_014958.1
Lotus japonicus
LjSGA_014958.1
N
0.724
mgf023771m
Mimulus guttatus
mgf023771m
N
0.724
Cagra.0876s0043
Capsella grandiflora
Cagra.0876s0043
N
0.724
chr1.CM0600.120.nd
Lotus japonicus
chr1.CM0600.120.nd
N
0.723
Traes_3DL_D9A29948B
Triticum aestivum
Traes_3DL_D9A29948B
N
0.722
MLOC_71332
Hordeum vulgare
MLOC_71332
N
0.722
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.722
Traes_3AL_F09C7CA19
Triticum aestivum
Traes_3AL_F09C7CA19
N
0.722
OB06G28240
Oryza brachyantha
OB06G28240
N
0.721
Eucgr.B03766
Eucalyptus grandis
Eucgr.B03766
N
0.721
Pavir.Db00878
Panicum virgatum
Pavir.Db00878
N
0.721
Traes_7AS_FD974A17F
Triticum aestivum
Traes_7AS_FD974A17F
N
0.721
TCM_041010
Theobroma cacao
TCM_041010
I
0.721
AMTR_s00057p00069720
Amborella trichopoda
AMTR_s00057p00069720
N
0.720
Pavir.Eb00654
Panicum virgatum
Pavir.Eb00654
I
0.718
Gorai.012G186500
Gossypium raimondii
Gorai.012G186500
I
0.717
ATMYB16
Arabidopsis thaliana
AT5G15310
I
0.717
LjSGA_034303.1
Lotus japonicus
LjSGA_034303.1
N
0.715
MLOC_39554
Hordeum vulgare
MLOC_39554
I
0.714
LjSGA_057038.1
Lotus japonicus
LjSGA_057038.1
N
0.711
gene24516-v1.0-hybrid
Fragaria vesca
gene24516-v1.0-hybrid
N
0.709
CM0385.220.nd
Lotus japonicus
CM0385.220.nd
N
0.702
Bo4g198650
Brassica oleracea
Bo4g198650
N
0.702
cassava45648.m1
Manihot esculenta
cassava45648.m1
N
0.702
Pavir.Eb02286
Panicum virgatum
Pavir.Eb02286
N
0.702
PK00358.1
Cannabis sativa
PK00358.1
N
0.702
Pavir.J14839
Panicum virgatum
Pavir.J14839
N
0.702
evm.TU.supercontig_1.55
Carica papaya
evm.TU.supercontig_1.55
N
0.695
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.694
Pm000007
Prunus mume
Pm000007
N
0.694
Traes_7AS_ADDEF000C
Triticum aestivum
Traes_7AS_ADDEF000C
N
0.694
Pavir.J25377
Panicum virgatum
Pavir.J25377
N
0.689
mgf018056m
Mimulus guttatus
mgf018056m
N
0.685
chr5.CM0071.390.nd
Lotus japonicus
chr5.CM0071.390.nd
N
0.684
MTR_1g087540
Medicago truncatula
MTR_1g087540
N
0.684
Ca_10215
Cicer arietinum
Ca_10215
N
0.684
PGSC0003DMG400004610
Solanum tuberosum
PGSC0003DMG400004610
N
0.683
ORGLA02G0219000
Oryza glaberrima
ORGLA02G0219000
N
0.682
orange1.1g019307m.g
Citrus sinensis
orange1.1g019307m.g
I
0.682
MYB60
Arabidopsis thaliana
AT1G08810
D
0.682
PK21717.1
Cannabis sativa
PK21717.1
N
0.681
LjSGA_064890.1.1
Lotus japonicus
LjSGA_064890.1.1
N
0.678
Gorai.008G086400
Gossypium raimondii
Gorai.008G086400
I
0.674
Bostr.13129s0196
Boechera stricta
Bostr.13129s0196
I
0.672
Gorai.001G024300
Gossypium raimondii
Gorai.001G024300
I
0.668
GLYMA14G10483
Glycine max
GLYMA14G10483
I
0.668
SapurV1A.0890s0050
Salix purpurea
SapurV1A.0890s0050
I
0.668
SapurV1A.3377s0010
Salix purpurea
SapurV1A.3377s0010
I
0.668
OLONG_025203
Oryza longistaminata
OLONG_025203
N
0.664
Traes_6AL_C0A2B4F041
Triticum aestivum
Traes_6AL_C0A2B4F041
N
0.664
MDP0000413041
Malus domestica
MDP0000413041
N
0.664
SapurV1A.0021s0930
Salix purpurea
SapurV1A.0021s0930
I
0.664
SapurV1A.0006s0790
Salix purpurea
SapurV1A.0006s0790
I
0.664
OPUNC01G25350
Oryza punctata
OPUNC01G25350
N
0.662
MDP0000119369
Malus domestica
MDP0000119369
N
0.662