Bostr.29505s0026 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.29505s0026 T285846_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB81
M07049_2.00
Arabidopsis thaliana
VTAACNGHWWH

DWWDCNGTTAB
Dap-seq
OMalley et al.(2016)
MYB81_col_a
0.796 0.884
AtMYB81
M07050_2.00
Arabidopsis thaliana
DHHNYAACBGHWWH

DWWDCVGTTRNDDH
Dap-seq
OMalley et al.(2016)
MYB81_colamp_a
0.796 0.884
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.29505s0026.1.p Myb 22 67
Bostr.29505s0026.1.p Myb 66 106

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AtMYB81 Arabidopsis thaliana AT2G26960 D 0.796
AtMYB81 Arabidopsis lyrata Al_scaffold_0004_975 I 0.809
Bo3g041750 Brassica oleracea Bo3g041750 I 0.734
Bo4g076940 Brassica oleracea Bo4g076940 I 0.688
Bra000531 Brassica rapa Bra000531 I 0.734
Bostr.6864s0293 Boechera stricta Bostr.6864s0293 I 0.783
Cagra.9104s0001 Capsella grandiflora Cagra.9104s0001 I 0.800
Carubv10025403m.g Capsella rubella Carubv10025403m.g I 0.800
Thhalv10002011m.g Eutrema salsugineum Thhalv10002011m.g I 0.744