Bostr.7305s0060 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.7305s0060 T285906_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RVE6
M01081_2.00
Arabidopsis thaliana
AATATCTD

HAGATATT
PBM
Sullivan et al.(2014)
pTH7151
0.909 1.000
RVE6
M07138_2.00
Arabidopsis thaliana
NNAAAATATCT

AGATATTTTNN
Dap-seq
OMalley et al.(2016)
At5g52660_col_a
0.909 1.000
RVE6
M07139_2.00
Arabidopsis thaliana
NNNWAAATATCT

AGATATTTWNNN
Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a
0.909 1.000
PK02532.1
M02347_2.00
Cannabis sativa
WAATATCTN

NAGATATTW
PBM
Weirauch et al.(2014)
pTH9579
0.899 0.978
RVE8
M01074_2.00
Arabidopsis thaliana
NNNRWATCNN

NNGATWYNNN
PBM
Sullivan et al.(2014)
pTH7136
0.891 0.935
RVE8
M07069_2.00
Arabidopsis thaliana
NHNWAAATATCT

AGATATTTWNDN
Dap-seq
OMalley et al.(2016)
At3g09600_col_a
0.891 0.935
RVE8
M07070_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a
0.891 0.935
RVE4
M07117_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
LCL1_colamp_a
0.891 0.935
RVE4
M07118_2.00
Arabidopsis thaliana
NAAAATATCT

AGATATTTTN
Dap-seq
OMalley et al.(2016)
LCL1_col
0.891 0.935
mybG
M02319_2.00
Dictyostelium discoideum
WAATATCT

AGATATTW
PBM
Weirauch et al.(2014)
pTH5362
0.808 0.848
RVE5
M01079_2.00
Arabidopsis thaliana
NWAATATCHN

NDGATATTWN
PBM
Sullivan et al.(2014)
pTH7138
0.793 0.870
RVE5
M07100_2.00
Arabidopsis thaliana
NNAAAATATCT

AGATATTTTNN
Dap-seq
OMalley et al.(2016)
At4g01280_col_a
0.793 0.870
RVE5
M07101_2.00
Arabidopsis thaliana
NNWAAATATCT

AGATATTTWNN
Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a
0.793 0.870
PK08316.1
M02350_2.00
Cannabis sativa
NNNRWATCNN

NNGATWYNNN
PBM
Weirauch et al.(2014)
pTH9488
0.697 0.674
RVE1
M00879_2.00
Arabidopsis thaliana
AAATATCT

AGATATTT
PBM
Franco-Zorrilla et al.(2014)
RVE1
0.661 0.630
RVE1
M07128_2.00
Arabidopsis thaliana
NNNWAAATATCTNN

NNAGATATTTWNNN
Dap-seq
OMalley et al.(2016)
RVE1_col_a
0.661 0.630
RVE1
M07129_2.00
Arabidopsis thaliana
NNWAATATCW

WGATATTWNN
Dap-seq
OMalley et al.(2016)
RVE1_colamp_a
0.661 0.630
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7305s0060.1.p Myb 73 118

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

322 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw.78.158.1 Branchiostoma floridae gw.78.158.1 N 0.000
ENSSTOG00000007256 Ictidomys tridecemlineatus ENSSTOG00000007256 N 0.000
TCF23 Sus scrofa ENSSSCG00000027409 N 0.000
ENSSHAG00000012462 Sarcophilus harrisii ENSSHAG00000012462 N 0.000
Tcf24 Rattus norvegicus ENSRNOG00000052668 N 0.000
Tcf23 Rattus norvegicus ENSRNOG00000025736 N 0.000
ENSPVAG00000015152 Pteropus vampyrus ENSPVAG00000015152 N 0.000
ENSPSIG00000014305 Pelodiscus sinensis ENSPSIG00000014305 N 0.000
ENSPFOG00000004192 Poecilia formosa ENSPFOG00000004192 N 0.000
ENSPANG00000017721 Papio anubis ENSPANG00000017721 N 0.000
ENSOPRG00000010556 Ochotona princeps ENSOPRG00000010556 N 0.000
ENSOCUG00000008655 Oryctolagus cuniculus ENSOCUG00000008655 N 0.000
ENSOARG00000019168 Ovis aries ENSOARG00000019168 N 0.000
ENSSTOG00000015523 Ictidomys tridecemlineatus ENSSTOG00000015523 N 0.000
TCF24 Takifugu rubripes ENSTRUG00000009376 N 0.000
e_gw.78.157.1 Branchiostoma floridae e_gw.78.157.1 N 0.000
e_gw.78.156.1 Branchiostoma floridae e_gw.78.156.1 N 0.000
Pvit_15007 Pogona vitticeps Pvit_15007 N 0.000
Ogr10845 Ophisaurus gracilis Ogr10845 N 0.000
Gfo_R001999 Geospiza fortis Gfo_R001999 N 0.000
ENSP00000296096-D1 Bos grunniens ENSP00000296096-D1 N 0.000
Cmyd_10002847 Chelonia mydas Cmyd_10002847 N 0.000
Alligator_sinensis_CCG001228.1 Alligator sinensis Alligator_sinensis_CCG001228.1 N 0.000
SPU_016445 Strongylocentrotus purpuratus SPU_016445 N 0.000
LotgiG70568 Lottia gigantea LotgiG70568 N 0.000
TCF24 Tursiops truncatus ENSTTRG00000017150 N 0.000
TCF23 Tursiops truncatus ENSTTRG00000005255 N 0.000
ENSOARG00000000076 Ovis aries ENSOARG00000000076 N 0.000
TCF23 Ornithorhynchus anatinus ENSOANG00000003936 N 0.000
TCF24 Ornithorhynchus anatinus ENSOANG00000002317 N 0.000
Tcf23 Dipodomys ordii ENSDORG00000014403 N 0.000
TCF24 Dasypus novemcinctus ENSDNOG00000045736 N 0.000
TCF24 Danio rerio ENSDARG00000086944 N 0.000
ENSCSAG00000014111 Chlorocebus sabaeus ENSCSAG00000014111 N 0.000
ENSCPOG00000003785 Cavia porcellus ENSCPOG00000003785 N 0.000
TCF23 Callithrix jacchus ENSCJAG00000001198 N 0.000
TCF23 Canis familiaris ENSCAFG00000030192 N 0.000
TCF24 Canis familiaris ENSCAFG00000029615 N 0.000
TCF23 Bos taurus ENSBTAG00000014813 N 0.000
ENSAMXG00000013680 Astyanax mexicanus ENSAMXG00000013680 N 0.000
ENSAMEG00000012533 Ailuropoda melanoleuca ENSAMEG00000012533 N 0.000
ENSAMEG00000001827 Ailuropoda melanoleuca ENSAMEG00000001827 N 0.000
TCF23 Equus caballus ENSECAG00000021374 N 0.000
TCF24 Homo sapiens ENSG00000261787 N 0.000
ENSNLEG00000010898 Nomascus leucogenys ENSNLEG00000010898 N 0.000
Tcf24 Mus musculus ENSMUSG00000099032 N 0.000
Tcf23 Mus musculus ENSMUSG00000006642 N 0.000
ENSMODG00000024958 Monodelphis domestica ENSMODG00000024958 N 0.000
TCF23 Monodelphis domestica ENSMODG00000015714 N 0.000
ENSMEUG00000010665 Macropus eugenii ENSMEUG00000010665 N 0.000
ENSLOCG00000004611 Lepisosteus oculatus ENSLOCG00000004611 N 0.000
TCF23 Loxodonta africana ENSLAFG00000014587 N 0.000
ENSLACG00000014458 Latimeria chalumnae ENSLACG00000014458 N 0.000
ENSLACG00000004204 Latimeria chalumnae ENSLACG00000004204 N 0.000
TCF24 Gorilla gorilla ENSGGOG00000027653 N 0.000
ENSGACG00000002911 Gasterosteus aculeatus ENSGACG00000002911 N 0.000
TCF24 Anolis carolinensis ENSACAG00000016461 N 0.000