Cagra.3501s0113 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.3501s0113 T286117_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3501s0113.1.p Myb 282 332

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_32528 Aegilops tauschii F775_32528 N 0.688
Aquca_026_00151 Aquilegia coerulea Aquca_026_00151 N 0.744
fgenesh2_kg.1__1502__AT1G13880.1 Arabidopsis lyrata fgenesh2_kg.1__1502__AT1G13880.1 N 0.775
fgenesh2_kg.5__246__AT2G03470.1 Arabidopsis lyrata fgenesh2_kg.5__246__AT2G03470.1 N 0.719
AT2G03470 Arabidopsis thaliana AT2G03470 N 0.719
AT1G13880 Arabidopsis thaliana AT1G13880 N 0.723
Bostr.0556s0170 Boechera stricta Bostr.0556s0170 N 0.701
Bostr.13671s0067 Boechera stricta Bostr.13671s0067 N 0.720
BRADI4G40450 Brachypodium distachyon BRADI4G40450 N 0.695
Bo8g107180 Brassica oleracea Bo8g107180 N 0.722
Bo8g065710 Brassica oleracea Bo8g065710 N 0.800
Bo7g081200 Brassica oleracea Bo7g081200 N 0.719
Bra041096 Brassica rapa Bra041096 N 0.719
Bra016722 Brassica rapa Bra016722 N 0.818
Bra026876 Brassica rapa Bra026876 N 0.806
PK21343.1 Cannabis sativa PK21343.1 N 0.708
Carubv10009267m.g Capsella rubella Carubv10009267m.g N 0.820
Ca_25548 Cicer arietinum Ca_25548 N 0.693
orange1.1g039760m.g Citrus sinensis orange1.1g039760m.g N 0.694
Thhalv10005386m.g Eutrema salsugineum Thhalv10005386m.g N 0.719
gene25773-v1.0-hybrid Fragaria vesca gene25773-v1.0-hybrid N 0.706
GLYMA07G35340 Glycine max GLYMA07G35340 N 0.698
GLYMA20G03230 Glycine max GLYMA20G03230 N 0.683
Lus10004658.g Linum usitatissimum Lus10004658.g N 0.691
MDP0000658202 Malus domestica MDP0000658202 N 0.672
cassava22481.valid.m1 Manihot esculenta cassava22481.valid.m1 N 0.700
cassava12684.valid.m1 Manihot esculenta cassava12684.valid.m1 N 0.707
MTR_3g023780 Medicago truncatula MTR_3g023780 N 0.695
GSMUA_Achr6G24610_001 Musa acuminata GSMUA_Achr6G24610_001 N 0.720
GSMUA_Achr1G24520_001 Musa acuminata GSMUA_Achr1G24520_001 N 0.742
Pavir.J38487 Panicum virgatum Pavir.J38487 N 0.730
Pavir.Ia04672 Panicum virgatum Pavir.Ia04672 N 0.730
POPTR_0010s16720 Populus trichocarpa POPTR_0010s16720 N 0.680
SapurV1A.0072s0050 Salix purpurea SapurV1A.0072s0050 N 0.718
Si038913m.g Setaria italica Si038913m.g N 0.730
Sb01g043100 Sorghum bicolor Sb01g043100 N 0.670
TCM_014163 Theobroma cacao TCM_014163 N 0.678
Traes_1BS_2D464CB3E Triticum aestivum Traes_1BS_2D464CB3E N 0.688
Traes_5BS_199E47242 Triticum aestivum Traes_5BS_199E47242 N 0.668
Traes_5AS_C458D04EB Triticum aestivum Traes_5AS_C458D04EB N 0.688
Traes_5DS_ED5D9E7C8 Triticum aestivum Traes_5DS_ED5D9E7C8 N 0.688
Traes_6DL_95CDF7628 Triticum aestivum Traes_6DL_95CDF7628 N 0.688
TRIUR3_27708 Triticum urartu TRIUR3_27708 N 0.688
VIT_17s0000g06810 Vitis vinifera VIT_17s0000g06810 N 0.662
VIT_14s0108g01580 Vitis vinifera VIT_14s0108g01580 N 0.677
GRMZM2G100431 Zea mays GRMZM2G100431 N 0.709