gene17750-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene17750-v1.0-hybrid T287327_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN

NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.888 0.957
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN

NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.668 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna17750.1-v1.0-hybrid Myb 197 247

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OBART07G07520 Oryza barthii OBART07G07520 N 0.000
OGLUM07G07210 Oryza glumaepatula OGLUM07G07210 N 0.000
BGIOSGA025404 Oryza indica BGIOSGA025404 N 0.000
ONIVA07G06070 Oryza nivara ONIVA07G06070 N 0.000
OPUNC07G07230 Oryza punctata OPUNC07G07230 N 0.000
ORUFI07G07520 Oryza rufipogon ORUFI07G07520 N 0.000