gene25982-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene25982-v1.0-hybrid T287383_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna25982.1-v1.0-hybrid Myb 158 205
mrna25982.1-v1.0-hybrid Myb 211 256

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.686
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.669
PK14784.1 Cannabis sativa PK14784.1 I 0.739
PK23594.1 Cannabis sativa PK23594.1 I 0.676
evm.TU.supercontig_96.57 Carica papaya evm.TU.supercontig_96.57 I 0.719
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.674
Ca_01329 Cicer arietinum Ca_01329 I 0.742
Ca_17627 Cicer arietinum Ca_17627 I 0.733
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.709
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.665
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.709
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.665
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.665
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.727
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.739
gene25098-v1.0-hybrid Fragaria vesca gene25098-v1.0-hybrid I 0.668
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.734
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.734
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.709
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.736
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.700
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.682
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.666
Gorai.004G151000 Gossypium raimondii Gorai.004G151000 I 0.699
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.665
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.703
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.708
MDP0000723614 Malus domestica MDP0000723614 I 0.665
MDP0000655330 Malus domestica MDP0000655330 I 0.665
MDP0000157940 Malus domestica MDP0000157940 I 0.701
MDP0000791870 Malus domestica MDP0000791870 I 0.665
MDP0000915330 Malus domestica MDP0000915330 I 0.739
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.665
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.699
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.727
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.665
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.725
MTR_8g027345 Medicago truncatula MTR_8g027345 I 0.689
mgf015598m Mimulus guttatus mgf015598m I 0.661
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.684
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.706
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.706
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.674
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.665
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.745
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.760
Pm018338 Prunus mume Pm018338 I 0.736
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.736
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.665
30068.m002544 Ricinus communis 30068.m002544 I 0.697
SapurV1A.0035s0040 Salix purpurea SapurV1A.0035s0040 I 0.695
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.706
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.665
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.691
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.760
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.715
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.674
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.679
TCM_025910 Theobroma cacao TCM_025910 I 0.665
TCM_024180 Theobroma cacao TCM_024180 I 0.665
TCM_005112 Theobroma cacao TCM_005112 I 0.736
TCM_015685 Theobroma cacao TCM_015685 I 0.661
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.675
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.706