Lus10001093.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10001093.g T287848_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.669 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10001093 Myb 18 65
Lus10001093 Myb 71 116

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10040139.g Linum usitatissimum Lus10040139.g I 0.909
Lus10003001.g Linum usitatissimum Lus10003001.g I 0.766
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.760
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.757
Ca_11494 Cicer arietinum Ca_11494 I 0.757
MTR_5g029840 Medicago truncatula MTR_5g029840 I 0.755
LjSGA_022617.1 Lotus japonicus LjSGA_022617.1 I 0.748
Lus10011031.g Linum usitatissimum Lus10011031.g N 0.733
Gorai.003G183700 Gossypium raimondii Gorai.003G183700 I 0.729
PGSC0003DMG400017525 Solanum tuberosum PGSC0003DMG400017525 I 0.726
Bostr.25463s0081 Boechera stricta Bostr.25463s0081 I 0.726
cassava44907.m1 Manihot esculenta cassava44907.m1 I 0.723
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.723
30054.m000809 Ricinus communis 30054.m000809 I 0.723
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I 0.714
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I 0.711
Cagra.14303s0002 Capsella grandiflora Cagra.14303s0002 I 0.709
Carubv10003172m.g Capsella rubella Carubv10003172m.g I 0.709
GLYMA11G01150 Glycine max GLYMA11G01150 I 0.708
GSMUA_Achr4G19880_001 Musa acuminata GSMUA_Achr4G19880_001 I 0.708
MYB39 Vitis vinifera VIT_02s0012g01650 I 0.707
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.706
Cucsa.104340 Cucumis sativus Cucsa.104340 I 0.705
Cla014358 Citrullus lanatus Cla014358 I 0.705
Solyc08g076710.2 Solanum lycopersicum Solyc08g076710.2 I 0.705
Cla019747 Citrullus lanatus Cla019747 I 0.702
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.702
PRUPE_ppa019280mg Prunus persica PRUPE_ppa019280mg I 0.702
Pm023191 Prunus mume Pm023191 I 0.702
VIT_16s0039g01710 Vitis vinifera VIT_16s0039g01710 I 0.702
GLYMA01G02070 Glycine max GLYMA01G02070 I 0.700
Pavir.Db01743 Panicum virgatum Pavir.Db01743 I 0.699
Gorai.004G183700 Gossypium raimondii Gorai.004G183700 I 0.698
OB06G19130 Oryza brachyantha OB06G19130 I 0.697
Pavir.Da01229 Panicum virgatum Pavir.Da01229 I 0.697
Sb10g009330 Sorghum bicolor Sb10g009330 I 0.697
Si007017m.g Setaria italica Si007017m.g I 0.697
GRMZM2G048910 Zea mays GRMZM2G048910 I 0.697
BGIOSGA022649 Oryza indica BGIOSGA022649 I 0.697
ORUFI06G10280 Oryza rufipogon ORUFI06G10280 I 0.697
OS06G0258000 Oryza sativa OS06G0258000 I 0.697
ORGLA06G0093500 Oryza glaberrima ORGLA06G0093500 I 0.697
gene02214-v1.0-hybrid Fragaria vesca gene02214-v1.0-hybrid I 0.696
MYB42 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002571 I 0.696
MYB42 Arabidopsis thaliana AT4G12350 I 0.696
orange1.1g039198m.g Citrus sinensis orange1.1g039198m.g I 0.694
Ciclev10020765m.g Citrus clementina Ciclev10020765m.g I 0.694
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.693
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.692
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.692
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.692
Bo3g165540 Brassica oleracea Bo3g165540 I 0.689
MDP0000286526 Malus domestica MDP0000286526 I 0.689
F775_29159 Aegilops tauschii F775_29159 I 0.688
TRIUR3_16495 Triticum urartu TRIUR3_16495 I 0.688
Bra001472 Brassica rapa Bra001472 I 0.688
F775_17058 Aegilops tauschii F775_17058 I 0.688
Bo3g065150 Brassica oleracea Bo3g065150 I 0.688
BRADI3G56917 Brachypodium distachyon BRADI3G56917 I 0.688
MLOC_14021 Hordeum vulgare MLOC_14021 I 0.688
Traes_7DS_5100A9609 Triticum aestivum Traes_7DS_5100A9609 I 0.688
MYB85 Arabidopsis lyrata fgenesh2_kg.7__2034__AT4G22680.1 I 0.687
Aquca_005_00496 Aquilegia coerulea Aquca_005_00496 I 0.687
Bo1g028520 Brassica oleracea Bo1g028520 I 0.687
PK18231.1 Cannabis sativa PK18231.1 I 0.686
ORUFI02G34560 Oryza rufipogon ORUFI02G34560 I 0.686
ORGLA02G0284500 Oryza glaberrima ORGLA02G0284500 I 0.686
OGLUM02G33500 Oryza glumaepatula OGLUM02G33500 I 0.686
orange1.1g045387m.g Citrus sinensis orange1.1g045387m.g I 0.686
Ciclev10009050m.g Citrus clementina Ciclev10009050m.g I 0.686
OBART02G32900 Oryza barthii OBART02G32900 I 0.686
OMERI02G31500 Oryza meridionalis OMERI02G31500 I 0.686
OPUNC02G30360 Oryza punctata OPUNC02G30360 I 0.686
ONIVA02G35050 Oryza nivara ONIVA02G35050 I 0.686
BGIOSGA029380 Oryza indica BGIOSGA029380 I 0.685
OS09G0532900 Oryza sativa OS09G0532900 I 0.685
OLONG_005336 Oryza longistaminata OLONG_005336 I 0.685
ORGLA09G0137500 Oryza glaberrima ORGLA09G0137500 I 0.685
OB09G24070 Oryza brachyantha OB09G24070 I 0.685
Sb07g028990 Sorghum bicolor Sb07g028990 I 0.684
GRMZM2G017268 Zea mays GRMZM2G017268 I 0.684
Ciclev10003251m.g Citrus clementina Ciclev10003251m.g I 0.684
GRMZM2G110135 Zea mays GRMZM2G110135 I 0.684
TCM_016552 Theobroma cacao TCM_016552 I 0.684
MTR_5g007370 Medicago truncatula MTR_5g007370 I 0.684
Si017785m.g Setaria italica Si017785m.g I 0.684
TCM_031294 Theobroma cacao TCM_031294 I 0.683
Bra013633 Brassica rapa Bra013633 I 0.683
Gorai.002G077200 Gossypium raimondii Gorai.002G077200 I 0.683
Solyc08g076700.1 Solanum lycopersicum Solyc08g076700.1 I 0.683
evm.TU.supercontig_12.22 Carica papaya evm.TU.supercontig_12.22 I 0.683
orange1.1g024849m.g Citrus sinensis orange1.1g024849m.g I 0.682
Cla003626 Citrullus lanatus Cla003626 I 0.682
VIT_16s0022g01210 Vitis vinifera VIT_16s0022g01210 I 0.682
evm.TU.supercontig_3.300 Carica papaya evm.TU.supercontig_3.300 I 0.682
Ciclev10005666m.g Citrus clementina Ciclev10005666m.g I 0.682
Cucsa.115620 Cucumis sativus Cucsa.115620 I 0.682
Gorai.009G281000 Gossypium raimondii Gorai.009G281000 I 0.682
chr3.CM0127.290.nc Lotus japonicus chr3.CM0127.290.nc I 0.681
TRIUR3_03304 Triticum urartu TRIUR3_03304 I 0.680
MLOC_51960 Hordeum vulgare MLOC_51960 I 0.680
Traes_7AS_B8E8A2F55 Triticum aestivum Traes_7AS_B8E8A2F55 I 0.680
Si014103m.g Setaria italica Si014103m.g I 0.680
GSMUA_Achr9G15640_001 Musa acuminata GSMUA_Achr9G15640_001 I 0.679
Thhalv10028864m.g Eutrema salsugineum Thhalv10028864m.g I 0.679
PK08857.1 Cannabis sativa PK08857.1 I 0.679
Eucgr.D02014 Eucalyptus grandis Eucgr.D02014 I 0.679
cassava44382.m1 Manihot esculenta cassava44382.m1 I 0.678
cassava39451.m1 Manihot esculenta cassava39451.m1 I 0.678
Gorai.009G236900 Gossypium raimondii Gorai.009G236900 I 0.678
GLYMA01G44370 Glycine max GLYMA01G44370 I 0.678
LPERR02G26970 Leersia perrieri LPERR02G26970 I 0.677
evm.TU.supercontig_90.68 Carica papaya evm.TU.supercontig_90.68 I 0.677
MDP0000910638 Malus domestica MDP0000910638 I 0.677
Thhalv10014028m.g Eutrema salsugineum Thhalv10014028m.g I 0.676
Thhalv10027281m.g Eutrema salsugineum Thhalv10027281m.g I 0.676
Bo2g009800 Brassica oleracea Bo2g009800 I 0.676
Bra028593 Brassica rapa Bra028593 I 0.676
Bra020837 Brassica rapa Bra020837 I 0.676
SELMODRAFT_38058 Selaginella moellendorffii SELMODRAFT_38058 I 0.676
Gorai.004G029000 Gossypium raimondii Gorai.004G029000 I 0.675
cassava4659.m1 Manihot esculenta cassava4659.m1 I 0.675
Bostr.0568s0266 Boechera stricta Bostr.0568s0266 I 0.675
Bo3g099390 Brassica oleracea Bo3g099390 I 0.675
evm.TU.supercontig_752.1 Carica papaya evm.TU.supercontig_752.1 I 0.675
Carubv10026822m.g Capsella rubella Carubv10026822m.g I 0.675
Thhalv10004620m.g Eutrema salsugineum Thhalv10004620m.g I 0.675
AtMYB53 Arabidopsis thaliana AT5G65230 I 0.675
Cagra.0917s0061 Capsella grandiflora Cagra.0917s0061 I 0.675
TRIUR3_03772 Triticum urartu TRIUR3_03772 I 0.675
Traes_6AL_2BA02CAA9 Triticum aestivum Traes_6AL_2BA02CAA9 I 0.675
Traes_6DL_8BF29D46C Triticum aestivum Traes_6DL_8BF29D46C I 0.675
Traes_6DL_499F64524 Triticum aestivum Traes_6DL_499F64524 I 0.675
Traes_6BL_5A2DB8F78 Triticum aestivum Traes_6BL_5A2DB8F78 I 0.675
GLYMA01G09280 Glycine max GLYMA01G09280 I 0.675
GLYMA09G33870 Glycine max GLYMA09G33870 I 0.675
MLOC_52134 Hordeum vulgare MLOC_52134 I 0.675
POPTR_0019s14070 Populus trichocarpa POPTR_0019s14070 I 0.675
F775_26732 Aegilops tauschii F775_26732 I 0.675
AtMYB53 Arabidopsis lyrata fgenesh2_kg.8__2570__AT5G65230.1 I 0.675
Traes_6BL_0D6CD031E Triticum aestivum Traes_6BL_0D6CD031E I 0.675
POPTR_0011s12750 Populus trichocarpa POPTR_0011s12750 I 0.674
AtMYB41 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001108 I 0.673
POPTR_0007s05360 Populus trichocarpa POPTR_0007s05360 I 0.673
Ciclev10003958m.g Citrus clementina Ciclev10003958m.g I 0.673
orange1.1g037998m.g Citrus sinensis orange1.1g037998m.g I 0.673
GLYMA12G01960 Glycine max GLYMA12G01960 I 0.672
Sb04g027540 Sorghum bicolor Sb04g027540 I 0.671
GRMZM2G159547 Zea mays GRMZM2G159547 I 0.671
GRMZM2G055158 Zea mays GRMZM2G055158 I 0.671
Sb04g028850 Sorghum bicolor Sb04g028850 I 0.671
Si020225m.g Setaria italica Si020225m.g I 0.671
OS02G0732600 Oryza sativa OS02G0732600 I 0.671
OGLUM02G32070 Oryza glumaepatula OGLUM02G32070 I 0.671
OB02G38450 Oryza brachyantha OB02G38450 I 0.671
BGIOSGA005676 Oryza indica BGIOSGA005676 I 0.671
ORGLA02G0269000 Oryza glaberrima ORGLA02G0269000 I 0.671
ORUFI02G33090 Oryza rufipogon ORUFI02G33090 I 0.671
Pavir.Aa00435 Panicum virgatum Pavir.Aa00435 I 0.671
POPTR_0001s41920 Populus trichocarpa POPTR_0001s41920 I 0.670
Gorai.007G348600 Gossypium raimondii Gorai.007G348600 I 0.670
Bo7g108060 Brassica oleracea Bo7g108060 I 0.670
MYB85 Arabidopsis thaliana AT4G22680 I 0.670
Cagra.6652s0005 Capsella grandiflora Cagra.6652s0005 I 0.670
Bostr.7867s0052 Boechera stricta Bostr.7867s0052 I 0.670
SapurV1A.0840s0010 Salix purpurea SapurV1A.0840s0010 I 0.670
Carubv10005483m.g Capsella rubella Carubv10005483m.g I 0.670
Bra019368 Brassica rapa Bra019368 I 0.670
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.669
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.669
GLYMA11G11570 Glycine max GLYMA11G11570 I 0.669
Cagra.1225s0085 Capsella grandiflora Cagra.1225s0085 I 0.669
Gorai.003G039500 Gossypium raimondii Gorai.003G039500 I 0.669
cassava17115.m1 Manihot esculenta cassava17115.m1 I 0.669
Carubv10007810m.g Capsella rubella Carubv10007810m.g I 0.669
SapurV1A.0039s0080 Salix purpurea SapurV1A.0039s0080 I 0.669
Bostr.7867s0646 Boechera stricta Bostr.7867s0646 I 0.669
SapurV1A.0151s0280 Salix purpurea SapurV1A.0151s0280 I 0.668
GRMZM2G106558 Zea mays GRMZM2G106558 I 0.668
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I 0.668
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.668
Eucgr.K00077 Eucalyptus grandis Eucgr.K00077 I 0.668
Solyc05g051550.1 Solanum lycopersicum Solyc05g051550.1 I 0.667
Bo9g172290 Brassica oleracea Bo9g172290 I 0.667
Bra020016 Brassica rapa Bra020016 I 0.667
GSMUA_Achr7G05680_001 Musa acuminata GSMUA_Achr7G05680_001 I 0.667
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.666
SapurV1A.0085s0540 Salix purpurea SapurV1A.0085s0540 I 0.664
Cucsa.383620 Cucumis sativus Cucsa.383620 I 0.664
Cla007705 Citrullus lanatus Cla007705 I 0.664
Pavir.Fb01563 Panicum virgatum Pavir.Fb01563 I 0.664
OPUNC06G07380 Oryza punctata OPUNC06G07380 I 0.664
Lus10018418.g Linum usitatissimum Lus10018418.g I 0.663
PGSC0003DMG400021654 Solanum tuberosum PGSC0003DMG400021654 I 0.662
Solyc05g048830.2 Solanum lycopersicum Solyc05g048830.2 I 0.662
cassava44885.m1 Manihot esculenta cassava44885.m1 I 0.662
Si030750m.g Setaria italica Si030750m.g I 0.661
Cla013669 Citrullus lanatus Cla013669 I 0.661
Sb02g030900 Sorghum bicolor Sb02g030900 I 0.661
MDP0000215675 Malus domestica MDP0000215675 I 0.661
Pavir.Bb02654 Panicum virgatum Pavir.Bb02654 I 0.661
Pavir.Ba01239 Panicum virgatum Pavir.Ba01239 I 0.661
GSMUA_Achr7G17250_001 Musa acuminata GSMUA_Achr7G17250_001 I 0.661
GRMZM2G104551 Zea mays GRMZM2G104551 I 0.661