Lus10001754.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10001754.g T287855_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.857 0.957
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.857 0.957
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.857 0.957
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.857 0.957
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.815 0.957
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.815 0.957
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.815 0.957
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.813 0.830
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.807 0.809
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.807 0.809
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.807 0.809
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.790 0.830
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.790 0.830
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.790 0.830
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.790 0.830
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.738 0.745
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.738 0.745
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.718 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10001754 Myb 95 146

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

798 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Nfkb2 Mus musculus ENSMUSG00000025225 D 0.000
NFKB2 Homo sapiens ENSG00000077150 D 0.000
Pvit_13855 Pogona vitticeps Pvit_13855 I 0.000
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I 0.000
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I 0.000
NFKB2 Pan troglodytes ENSPTRG00000002888 I 0.000
ENSPPYG00000002599 Pongo abelii ENSPPYG00000002599 I 0.000
NFKB2 Procavia capensis ENSPCAG00000011503 I 0.000
ENSPANG00000021013 Papio anubis ENSPANG00000021013 I 0.000
NFKB2 Otolemur garnettii ENSOGAG00000016379 I 0.000
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I 0.000
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I 0.000
NFKB2 Sus scrofa ENSSSCG00000010580 I 0.000
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I 0.000
Ogr18048 Ophisaurus gracilis Ogr18048 I 0.000
Myotis_brandtii_NFKB2_10025917 Myotis brandtii Myotis_brandtii_NFKB2_10025917 I 0.000
Gfo_R002459 Geospiza fortis Gfo_R002459 I 0.000
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I 0.000
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I 0.000
Brh_R009664 Buceros rhinoceros Brh_R009664 I 0.000
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I 0.000
Afo_R002575 Aptenodytes forsteri Afo_R002575 I 0.000
Aan_R011824 Calypte anna Aan_R011824 I 0.000
NFKB2 Tursiops truncatus ENSTTRG00000008357 I 0.000
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I 0.000
ENSOANG00000030023 Ornithorhynchus anatinus ENSOANG00000030023 I 0.000
ENSNLEG00000015079 Nomascus leucogenys ENSNLEG00000015079 I 0.000
NFKB2 Equus caballus ENSECAG00000019593 I 0.000
Nfkb2 Dipodomys ordii ENSDORG00000013409 I 0.000
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I 0.000
ENSCSAG00000005442 Chlorocebus sabaeus ENSCSAG00000005442 I 0.000
NFKB2 Cavia porcellus ENSCPOG00000004847 I 0.000
NFKB2 Callithrix jacchus ENSCJAG00000017928 I 0.000
NFKB2 Canis familiaris ENSCAFG00000010155 I 0.000
NFKB2 Bos taurus ENSBTAG00000006017 I 0.000
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I 0.000
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I 0.000
NFKB2 Echinops telfairi ENSETEG00000002347 I 0.000
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I 0.000
ENSMPUG00000016882 Mustela putorius furo ENSMPUG00000016882 I 0.000
NFKB2 Macaca mulatta ENSMMUG00000002990 I 0.000
NFKB2 Myotis lucifugus ENSMLUG00000006287 I 0.000
NFKB2 Microcebus murinus ENSMICG00000011856 I 0.000
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I 0.000
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I 0.000
NFKB2 Loxodonta africana ENSLAFG00000006805 I 0.000
NFKB2 Gorilla gorilla ENSGGOG00000006971 I 0.000
NFKB2 Gallus gallus ENSGALG00000005653 I 0.000
NFKB2 Felis catus ENSFCAG00000001242 I 0.000
NFKB2 Anolis carolinensis ENSACAG00000014215 I 0.000