Pavir.Eb01664 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Eb01664 T289164_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb01664.1.p Myb 13 60
Pavir.Eb01664.1.p Myb 66 110

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA004072 Oryza indica BGIOSGA004072 I 0.768
BGIOSGA011479 Oryza indica BGIOSGA011479 I 0.672
Bo2g057760 Brassica oleracea Bo2g057760 I 0.661
Bra033948 Brassica rapa Bra033948 I 0.662
BRADI2G44770 Brachypodium distachyon BRADI2G44770 I 0.753
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I 0.661
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.681
evm.TU.supercontig_49.71 Carica papaya evm.TU.supercontig_49.71 I 0.665
F775_02242 Aegilops tauschii F775_02242 I 0.707
GRMZM2G054111 Zea mays GRMZM2G054111 I 0.672
GRMZM2G143328 Zea mays GRMZM2G143328 I 0.740
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I 0.671
GSMUA_AchrUn_randomG27010_001 Musa acuminata GSMUA_AchrUn_randomG27010_001 I 0.668
LPERR01G20550 Leersia perrieri LPERR01G20550 I 0.724
MLOC_5568 Hordeum vulgare MLOC_5568 I 0.743
MLOC_68593 Hordeum vulgare MLOC_68593 I 0.669
MLOC_9927 Hordeum vulgare MLOC_9927 I 0.672
OB01G33330 Oryza brachyantha OB01G33330 I 0.768
OB03G13340 Oryza brachyantha OB03G13340 I 0.672
OBART01G24030 Oryza barthii OBART01G24030 I 0.768
OGLUM01G27780 Oryza glumaepatula OGLUM01G27780 I 0.768
OMERI01G22060 Oryza meridionalis OMERI01G22060 I 0.768
ONIVA01G27030 Oryza nivara ONIVA01G27030 I 0.768
OPUNC01G24010 Oryza punctata OPUNC01G24010 I 0.768
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I 0.661
ORGLA01G0193500 Oryza glaberrima ORGLA01G0193500 I 0.768
ORGLA03G0030900 Oryza glaberrima ORGLA03G0030900 I 0.672
ORUFI01G26910 Oryza rufipogon ORUFI01G26910 I 0.768
ORUFI03G03040 Oryza rufipogon ORUFI03G03040 I 0.672
OS01G0637800 Oryza sativa OS01G0637800 I 0.768
OS03G0142600 Oryza sativa OS03G0142600 I 0.672
Pavir.Eb01665 Panicum virgatum Pavir.Eb01665 N 0.747
Pavir.Ia04415 Panicum virgatum Pavir.Ia04415 I 0.672
Pavir.Ib00221 Panicum virgatum Pavir.Ib00221 I 0.672
Pavir.J05460 Panicum virgatum Pavir.J05460 I 0.759
Pavir.J35999 Panicum virgatum Pavir.J35999 I 0.835
POPTR_0001s35200 Populus trichocarpa POPTR_0001s35200 I 0.669
SapurV1A.0571s0200 Salix purpurea SapurV1A.0571s0200 I 0.673
Sb01g047450 Sorghum bicolor Sb01g047450 I 0.672
Sb03g029050 Sorghum bicolor Sb03g029050 I 0.733
Si003841m.g Setaria italica Si003841m.g I 0.751
Si003965m.g Setaria italica Si003965m.g I 0.800
Si037281m.g Setaria italica Si037281m.g I 0.672
TRAES3BF026200120CFD_g Triticum aestivum TRAES3BF026200120CFD_g I 0.737
Traes_1AL_91299CB97 Triticum aestivum Traes_1AL_91299CB97 I 0.669
Traes_3DL_429583AEC Triticum aestivum Traes_3DL_429583AEC I 0.707
TRIUR3_25064 Triticum urartu TRIUR3_25064 I 0.717