Thhalv10020738m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10020738m.g T290109_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.741 0.872
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.741 0.872
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.726 0.809
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.726 0.809
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.697 0.787
PK05732.1
M01276_2.00 		Cannabis sativa
HNATTCBNN
NNVGAATND		 PBM
Lambert et al.(2019)
pTH11367 		0.693 0.660
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.679 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10020738m Myb 234 285
Thhalv10020739m Myb 234 285

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.004G023100 Gossypium raimondii Gorai.004G023100 I 0.798
Bo3g065290 Brassica oleracea Bo3g065290 I 0.794
Carubv10013698m.g Capsella rubella Carubv10013698m.g I 0.794
Bo1g138650 Brassica oleracea Bo1g138650 I 0.794
Cagra.5641s0065 Capsella grandiflora Cagra.5641s0065 I 0.794
Bra039364 Brassica rapa Bra039364 I 0.794
Bra001484 Brassica rapa Bra001484 I 0.794
Bostr.3640s0078 Boechera stricta Bostr.3640s0078 I 0.794
fgenesh2_kg.3__1373__AT3G13040.1 Arabidopsis lyrata fgenesh2_kg.3__1373__AT3G13040.1 I 0.766
Sb04g003140 Sorghum bicolor Sb04g003140 I 0.760
TCM_039819 Theobroma cacao TCM_039819 I 0.757
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.751
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.751
evm.TU.supercontig_10.14 Carica papaya evm.TU.supercontig_10.14 I 0.751
TCM_027630 Theobroma cacao TCM_027630 I 0.751
Gorai.011G001500 Gossypium raimondii Gorai.011G001500 I 0.751
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.751
VIT_09s0070g00410 Vitis vinifera VIT_09s0070g00410 I 0.749
PHL6 Arabidopsis thaliana AT3G13040 D 0.741
Traes_4AS_7220D33B3 Triticum aestivum Traes_4AS_7220D33B3 I 0.739
MLOC_5585 Hordeum vulgare MLOC_5585 I 0.739
F775_09615 Aegilops tauschii F775_09615 I 0.739
Traes_4DL_2C27C34AF Triticum aestivum Traes_4DL_2C27C34AF I 0.739
cassava22661.valid.m1 Manihot esculenta cassava22661.valid.m1 I 0.736
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.736
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.736
cassava44101.valid.m1 Manihot esculenta cassava44101.valid.m1 I 0.736
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.736
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.736
Lus10035705.g Linum usitatissimum Lus10035705.g I 0.736
Lus10008197.g Linum usitatissimum Lus10008197.g I 0.736
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.736
Gorai.007G274700 Gossypium raimondii Gorai.007G274700 I 0.736
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.736
Cucsa.027530 Cucumis sativus Cucsa.027530 I 0.736
Lus10037296.g Linum usitatissimum Lus10037296.g I 0.736
Cla003565 Citrullus lanatus Cla003565 I 0.736
29680.m001711 Ricinus communis 29680.m001711 I 0.736
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.736
IGS.gm_4_00058 Chlorella NC64A IGS.gm_4_00058 I 0.733
mgf020931m Mimulus guttatus mgf020931m I 0.732
VIT_14s0036g01380 Vitis vinifera VIT_14s0036g01380 I 0.731
MTR_7g115530 Medicago truncatula MTR_7g115530 I 0.728
Bostr.23151s0001 Boechera stricta Bostr.23151s0001 I 0.726
PHL1 Arabidopsis lyrata fgenesh2_kg.6__2806__AT5G29000.2 I 0.726
PHL1 Arabidopsis thaliana AT5G29000 D 0.726
Ciclev10004984m.g Citrus clementina Ciclev10004984m.g I 0.725
Eucgr.B02155 Eucalyptus grandis Eucgr.B02155 I 0.725
orange1.1g014308m.g Citrus sinensis orange1.1g014308m.g I 0.725
GRMZM2G035370 Zea mays GRMZM2G035370 I 0.724
Lus10040583.g Linum usitatissimum Lus10040583.g I 0.720
cassava34206.m1 Manihot esculenta cassava34206.m1 I 0.720
Lus10040569.g Linum usitatissimum Lus10040569.g I 0.720
Lus10028102.g Linum usitatissimum Lus10028102.g I 0.720
POPTR_0018s14830 Populus trichocarpa POPTR_0018s14830 I 0.720
GRMZM2G010920 Zea mays GRMZM2G010920 I 0.719
MDP0000142146 Malus domestica MDP0000142146 I 0.718
POPTR_0019s03750 Populus trichocarpa POPTR_0019s03750 I 0.718
PRUPE_ppa005159mg Prunus persica PRUPE_ppa005159mg I 0.718
Eucgr.F04055 Eucalyptus grandis Eucgr.F04055 I 0.718
SapurV1A.0307s0080 Salix purpurea SapurV1A.0307s0080 I 0.718
Pm013132 Prunus mume Pm013132 I 0.718
gene05518-v1.0-hybrid Fragaria vesca gene05518-v1.0-hybrid I 0.718
POPTR_0013s04530 Populus trichocarpa POPTR_0013s04530 I 0.718
MDP0000182154 Malus domestica MDP0000182154 I 0.718
Carubv10013614m.g Capsella rubella Carubv10013614m.g I 0.716
MLOC_52271 Hordeum vulgare MLOC_52271 I 0.716
Cagra.8766s0002 Capsella grandiflora Cagra.8766s0002 I 0.716
Bra020622 Brassica rapa Bra020622 I 0.715
Bo2g151830 Brassica oleracea Bo2g151830 I 0.715
Carubv10001064m.g Capsella rubella Carubv10001064m.g I 0.715
Solyc05g055940.2 Solanum lycopersicum Solyc05g055940.2 I 0.714
fgenesh1_pm.C_scaffold_3000324 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000324 I 0.714
30169.m006598 Ricinus communis 30169.m006598 I 0.714
PGSC0003DMG400023467 Solanum tuberosum PGSC0003DMG400023467 I 0.714
Solyc04g050070.1 Solanum lycopersicum Solyc04g050070.1 I 0.707
SapurV1A.0309s0130 Salix purpurea SapurV1A.0309s0130 I 0.707
Thhalv10020942m.g Eutrema salsugineum Thhalv10020942m.g I 0.705
Bo5g148190 Brassica oleracea Bo5g148190 I 0.705
Cagra.4031s0031 Capsella grandiflora Cagra.4031s0031 I 0.705
Bra040196 Brassica rapa Bra040196 I 0.705
Carubv10002022m.g Capsella rubella Carubv10002022m.g I 0.705
SELMODRAFT_228335 Selaginella moellendorffii SELMODRAFT_228335 I 0.702
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.702
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.702
SELMODRAFT_270428 Selaginella moellendorffii SELMODRAFT_270428 I 0.702
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.702
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.702
cassava37547.valid.m1 Manihot esculenta cassava37547.valid.m1 I 0.697
TCM_026171 Theobroma cacao TCM_026171 I 0.697
GLYMA13G18805 Glycine max GLYMA13G18805 I 0.697
Lus10022886.g Linum usitatissimum Lus10022886.g I 0.697
Lus10022885.g Linum usitatissimum Lus10022885.g I 0.697
GLYMA03G32350 Glycine max GLYMA03G32350 I 0.697
Pavir.Ia03429 Panicum virgatum Pavir.Ia03429 I 0.697
chr1.CM0295.930.nd Lotus japonicus chr1.CM0295.930.nd I 0.697
SapurV1A.0252s0390 Salix purpurea SapurV1A.0252s0390 I 0.697
PHR1 Oryza indica BGIOSGA012553 I 0.697
Aquca_017_00793 Aquilegia coerulea Aquca_017_00793 I 0.697
GRMZM2G006477 Zea mays GRMZM2G006477 I 0.697
Pavir.J39104 Panicum virgatum Pavir.J39104 I 0.697
PHR1 Oryza sativa OS03G0329900 D 0.697
Gorai.007G149100 Gossypium raimondii Gorai.007G149100 I 0.697
GLYMA10G04540 Glycine max GLYMA10G04540 I 0.697
Sb01g036440 Sorghum bicolor Sb01g036440 I 0.697
AMTR_s00142p00049490 Amborella trichopoda AMTR_s00142p00049490 I 0.697
Si035682m.g Setaria italica Si035682m.g I 0.697
Ca_12255 Cicer arietinum Ca_12255 I 0.697
OLONG_005622 Oryza longistaminata OLONG_005622 I 0.697
OMERI03G14370 Oryza meridionalis OMERI03G14370 I 0.697
orange1.1g011805m.g Citrus sinensis orange1.1g011805m.g I 0.697
TCM_003939 Theobroma cacao TCM_003939 I 0.697
MTR_7g098250 Medicago truncatula MTR_7g098250 I 0.697
Carubv10013867m.g Capsella rubella Carubv10013867m.g I 0.697
MDP0000285150 Malus domestica MDP0000285150 I 0.697
Solyc06g008200.2 Solanum lycopersicum Solyc06g008200.2 I 0.697
29637.m000753 Ricinus communis 29637.m000753 I 0.697
OB03G25800 Oryza brachyantha OB03G25800 I 0.697
ONIVA03G17050 Oryza nivara ONIVA03G17050 I 0.697
GLYMA19G35080 Glycine max GLYMA19G35080 I 0.697
Ciclev10019956m.g Citrus clementina Ciclev10019956m.g I 0.697
evm.TU.supercontig_87.3 Carica papaya evm.TU.supercontig_87.3 I 0.697
MDP0000321461 Malus domestica MDP0000321461 I 0.697
Lus10024938.g Linum usitatissimum Lus10024938.g I 0.697
Eucgr.A01323 Eucalyptus grandis Eucgr.A01323 I 0.697
ORGLA03G0154000 Oryza glaberrima ORGLA03G0154000 I 0.697
GSMUA_Achr8G12580_001 Musa acuminata GSMUA_Achr8G12580_001 I 0.697
PK01035.1 Cannabis sativa PK01035.1 I 0.697
LPERR03G14050 Leersia perrieri LPERR03G14050 I 0.697
OPUNC03G15590 Oryza punctata OPUNC03G15590 I 0.697
VIT_07s0005g04120 Vitis vinifera VIT_07s0005g04120 I 0.697
GSMUA_Achr5G12960_001 Musa acuminata GSMUA_Achr5G12960_001 I 0.697
Aquca_034_00282 Aquilegia coerulea Aquca_034_00282 I 0.695
Lus10039124.g Linum usitatissimum Lus10039124.g I 0.694
GSMUA_Achr7G15740_001 Musa acuminata GSMUA_Achr7G15740_001 I 0.694
Lus10038734.g Linum usitatissimum Lus10038734.g I 0.694
Bra014348 Brassica rapa Bra014348 I 0.694
PK05732.1 Cannabis sativa PK05732.1 D 0.693
Thhalv10004351m.g Eutrema salsugineum Thhalv10004351m.g I 0.692
OPUNC02G02530 Oryza punctata OPUNC02G02530 I 0.691
ORGLA02G0030200 Oryza glaberrima ORGLA02G0030200 I 0.691
ORUFI02G03130 Oryza rufipogon ORUFI02G03130 I 0.691
ONIVA02G03010 Oryza nivara ONIVA02G03010 I 0.691
OMERI02G03860 Oryza meridionalis OMERI02G03860 I 0.691
PHR3 Oryza indica BGIOSGA007162 I 0.691
OBART02G03200 Oryza barthii OBART02G03200 I 0.691
PHR3 Oryza sativa OS02G0139000 I 0.691
OGLUM02G03100 Oryza glumaepatula OGLUM02G03100 I 0.691
GLYMA19G43690 Glycine max GLYMA19G43690 I 0.689
MTR_1g080330 Medicago truncatula MTR_1g080330 I 0.689
Ca_03781 Cicer arietinum Ca_03781 I 0.689
LjSGA_026114.1 Lotus japonicus LjSGA_026114.1 I 0.689
AMTR_s00131p00063460 Amborella trichopoda AMTR_s00131p00063460 I 0.689
Bra036123 Brassica rapa Bra036123 I 0.687
Bo9g010090 Brassica oleracea Bo9g010090 I 0.687
GRMZM2G162409 Zea mays GRMZM2G162409 I 0.685
GSMUA_Achr11G02560_001 Musa acuminata GSMUA_Achr11G02560_001 I 0.685
Pavir.Bb01566 Panicum virgatum Pavir.Bb01566 I 0.685
LPERR07G10540 Leersia perrieri LPERR07G10540 I 0.685
Pavir.Ba02554 Panicum virgatum Pavir.Ba02554 I 0.685
BRADI1G28920 Brachypodium distachyon BRADI1G28920 I 0.685
gene08317-v1.0-hybrid Fragaria vesca gene08317-v1.0-hybrid I 0.685
PDK_20s1306081g005 Phoenix dactylifera PDK_20s1306081g005 I 0.685
PHR2 Oryza indica BGIOSGA025605 I 0.685
BRADI1G63530 Brachypodium distachyon BRADI1G63530 I 0.685
F775_09823 Aegilops tauschii F775_09823 I 0.685
OB07G18720 Oryza brachyantha OB07G18720 I 0.685
OPUNC07G11150 Oryza punctata OPUNC07G11150 I 0.685
ONIVA07G10340 Oryza nivara ONIVA07G10340 I 0.685
Traes_3AS_6EEB8D2B2 Triticum aestivum Traes_3AS_6EEB8D2B2 I 0.685
TRAES3BF104900050CFD_g Triticum aestivum TRAES3BF104900050CFD_g I 0.685
ORGLA07G0105500 Oryza glaberrima ORGLA07G0105500 I 0.685
POPTR_0002s25960 Populus trichocarpa POPTR_0002s25960 I 0.685
ORUFI07G12650 Oryza rufipogon ORUFI07G12650 I 0.685
PRUPE_ppa004886mg Prunus persica PRUPE_ppa004886mg I 0.685
PHR2 Oryza sativa OS07G0438800 I 0.685
OMERI07G09960 Oryza meridionalis OMERI07G09960 I 0.685
OBART07G12530 Oryza barthii OBART07G12530 I 0.685
MDP0000248927 Malus domestica MDP0000248927 I 0.685
Sb02g010520 Sorghum bicolor Sb02g010520 I 0.685
Si029945m.g Setaria italica Si029945m.g I 0.685
OLONG_021629 Oryza longistaminata OLONG_021629 I 0.685
OGLUM07G11980 Oryza glumaepatula OGLUM07G11980 I 0.685
Gorai.010G159700 Gossypium raimondii Gorai.010G159700 I 0.684
PDK_20s1462141g001 Phoenix dactylifera PDK_20s1462141g001 I 0.683
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.681
Si022099m.g Setaria italica Si022099m.g I 0.681
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.681
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.681
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.681
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.681
OS04G0665600 Oryza sativa OS04G0665600 I 0.681
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.681
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.681
OBART04G28680 Oryza barthii OBART04G28680 I 0.681
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.681
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.681
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.681
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.681
OB04G35670 Oryza brachyantha OB04G35670 I 0.681
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.681
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.681
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.680
GSMUA_Achr2G10180_001 Musa acuminata GSMUA_Achr2G10180_001 I 0.679
Bostr.7903s0128 Boechera stricta Bostr.7903s0128 I 0.679
Cagra.1225s0029 Capsella grandiflora Cagra.1225s0029 I 0.679
Cucsa.037070 Cucumis sativus Cucsa.037070 I 0.679
PHR1 Arabidopsis lyrata fgenesh2_kg.7__1335__AT4G28610.1 I 0.679
Thhalv10025330m.g Eutrema salsugineum Thhalv10025330m.g I 0.679
mgf005047m Mimulus guttatus mgf005047m I 0.679
PHR1 Arabidopsis thaliana AT4G28610 D 0.679
Bo8g054450 Brassica oleracea Bo8g054450 I 0.679
Bra010355 Brassica rapa Bra010355 I 0.679
PK01823.1 Cannabis sativa PK01823.1 I 0.679
scaffold_304362.1 Arabidopsis lyrata scaffold_304362.1 I 0.679
Bostr.7867s0704 Boechera stricta Bostr.7867s0704 I 0.679
Cla006047 Citrullus lanatus Cla006047 I 0.679
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I 0.679
Solyc09g072830.2 Solanum lycopersicum Solyc09g072830.2 I 0.679
Pavir.Db00228 Panicum virgatum Pavir.Db00228 I 0.678
Pavir.Aa03223 Panicum virgatum Pavir.Aa03223 I 0.678
MLOC_54829 Hordeum vulgare MLOC_54829 I 0.678
BRADI1G34470 Brachypodium distachyon BRADI1G34470 I 0.678
Traes_7DL_090D0E08E Triticum aestivum Traes_7DL_090D0E08E I 0.678
Traes_7AL_D45376F32 Triticum aestivum Traes_7AL_D45376F32 I 0.678
F775_29452 Aegilops tauschii F775_29452 I 0.678
Traes_7BL_09DD5A1DC Triticum aestivum Traes_7BL_09DD5A1DC I 0.678
Pavir.J14911 Panicum virgatum Pavir.J14911 I 0.678
Si017191m.g Setaria italica Si017191m.g I 0.678
OB06G34350 Oryza brachyantha OB06G34350 I 0.678
TRIUR3_32904 Triticum urartu TRIUR3_32904 I 0.678
Si006354m.g Setaria italica Si006354m.g I 0.678
Sb10g029200 Sorghum bicolor Sb10g029200 I 0.678
BGIOSGA023563 Oryza indica BGIOSGA023563 I 0.678
OS06G0703900 Oryza sativa OS06G0703900 I 0.678
ORGLA06G0222600 Oryza glaberrima ORGLA06G0222600 I 0.678
mgf011847m Mimulus guttatus mgf011847m I 0.677
cassava31821.valid.m1 Manihot esculenta cassava31821.valid.m1 I 0.675
CHLREDRAFT_196473 Chlamydomonas reinhardtii CHLREDRAFT_196473 I 0.673
gw1.22.163.1 Volvox carteri gw1.22.163.1 I 0.673
SELMODRAFT_447260 Selaginella moellendorffii SELMODRAFT_447260 I 0.671
GLYMA03G41040 Glycine max GLYMA03G41040 I 0.671
PDK_20s1384631g001 Phoenix dactylifera PDK_20s1384631g001 I 0.671
GSMUA_Achr4G30200_001 Musa acuminata GSMUA_Achr4G30200_001 I 0.671
chr1.CM0600.200.nd Lotus japonicus chr1.CM0600.200.nd I 0.671
SELMODRAFT_405399 Selaginella moellendorffii SELMODRAFT_405399 I 0.671
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.670
OB02G43730 Oryza brachyantha OB02G43730 I 0.669
estExt_fgenesh1_pg.C_600033 Physcomitrella patens estExt_fgenesh1_pg.C_600033 I 0.669
TRIUR3_02291 Triticum urartu TRIUR3_02291 I 0.669
Traes_6BL_5D8EE6802 Triticum aestivum Traes_6BL_5D8EE6802 I 0.669
OLONG_010553 Oryza longistaminata OLONG_010553 I 0.669
BGIOSGA005373 Oryza indica BGIOSGA005373 I 0.669
ORUFI02G38560 Oryza rufipogon ORUFI02G38560 I 0.669
fgenesh1_pg.scaffold_391000034 Physcomitrella patens fgenesh1_pg.scaffold_391000034 I 0.668
estExt_fgenesh1_pg.C_2260017 Physcomitrella patens estExt_fgenesh1_pg.C_2260017 I 0.668
estExt_fgenesh1_pg.C_2690029 Physcomitrella patens estExt_fgenesh1_pg.C_2690029 I 0.668
fgenesh1_pg.scaffold_143000021 Physcomitrella patens fgenesh1_pg.scaffold_143000021 I 0.668
Bra038033 Brassica rapa Bra038033 I 0.666
PGSC0003DMG400028830 Solanum tuberosum PGSC0003DMG400028830 I 0.665
Solyc12g006280.1 Solanum lycopersicum Solyc12g006280.1 I 0.665
estExt_fgenesh1_pg.C_4900005 Physcomitrella patens estExt_fgenesh1_pg.C_4900005 I 0.664
MLOC_60198 Hordeum vulgare MLOC_60198 I 0.664
BRADI3G55120 Brachypodium distachyon BRADI3G55120 I 0.662
fgenesh2_pg.scaffold_112000035 Physcomitrella patens fgenesh2_pg.scaffold_112000035 I 0.662
estExt_fgenesh1_pg.C_3060021 Physcomitrella patens estExt_fgenesh1_pg.C_3060021 I 0.661