Thhalv10026896m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10026896m.g T290154_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.704 0.750
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.685 0.674
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.685 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10026896m Myb 9 55
Thhalv10026896m Myb 61 106

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Kwal_8021 Kluyveromyces waltii Kwal_8021 N 0.000