Thhalv10026896m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10026896m.g T290154_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.704 0.750
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.685 0.674
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.685 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10026896m Myb 9 55
Thhalv10026896m Myb 61 106

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I 0.839
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I 0.836
Carubv10007255m.g Capsella rubella Carubv10007255m.g I 0.836
AtMYB79 Arabidopsis thaliana AT4G13480 I 0.830
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I 0.821
TCM_021037 Theobroma cacao TCM_021037 I 0.809
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I 0.806
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.800
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.800
Bra001941 Brassica rapa Bra001941 I 0.800
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.800
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.800
Bo3g083130 Brassica oleracea Bo3g083130 I 0.800
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.800
MYB305 Arabidopsis thaliana AT3G24310 I 0.800
Bo1g098860 Brassica oleracea Bo1g098860 I 0.800
Bra028369 Brassica rapa Bra028369 I 0.800
Cla007745 Citrullus lanatus Cla007745 I 0.799
MDP0000183451 Malus domestica MDP0000183451 I 0.797
MDP0000133412 Malus domestica MDP0000133412 I 0.797
Bra015029 Brassica rapa Bra015029 I 0.796
Bo7g033260 Brassica oleracea Bo7g033260 I 0.796
Cucsa.383230 Cucumis sativus Cucsa.383230 I 0.796
mgf004640m Mimulus guttatus mgf004640m I 0.791
Ca_20437 Cicer arietinum Ca_20437 I 0.782
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.779
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I 0.779
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.776
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.776
Cucsa.255900 Cucumis sativus Cucsa.255900 I 0.776
Cla021798 Citrullus lanatus Cla021798 I 0.776
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.776
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.774
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.773
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.773
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.773
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.770
Pm009050 Prunus mume Pm009050 I 0.770
GLYMA04G26650 Glycine max GLYMA04G26650 I 0.768
GLYMA06G38340 Glycine max GLYMA06G38340 I 0.768
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.767
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.767
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.766
GLYMA20G34140 Glycine max GLYMA20G34140 I 0.765
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.764
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.761
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.759
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.759
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.759
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.757
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.757
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.756
Lus10014453.g Linum usitatissimum Lus10014453.g I 0.753
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.752
GLYMA15G14190 Glycine max GLYMA15G14190 I 0.751
GLYMA10G33450 Glycine max GLYMA10G33450 I 0.749
Ca_07872 Cicer arietinum Ca_07872 I 0.740
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I 0.740
MTR_1g073170 Medicago truncatula MTR_1g073170 I 0.731
Cucsa.238540 Cucumis sativus Cucsa.238540 I 0.728
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.724
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I 0.724
Cla016762 Citrullus lanatus Cla016762 I 0.721
OGLUM02G24660 Oryza glumaepatula OGLUM02G24660 I 0.717
Traes_6BL_8E4A831B6 Triticum aestivum Traes_6BL_8E4A831B6 I 0.717
Pavir.J37992 Panicum virgatum Pavir.J37992 I 0.717
Sb04g026210 Sorghum bicolor Sb04g026210 I 0.717
Pavir.Aa01294 Panicum virgatum Pavir.Aa01294 I 0.717
Si018007m.g Setaria italica Si018007m.g I 0.717
GRMZM2G043792 Zea mays GRMZM2G043792 I 0.717
GRMZM2G027697 Zea mays GRMZM2G027697 I 0.717
ORUFI04G19690 Oryza rufipogon ORUFI04G19690 I 0.712
ORGLA04G0153500 Oryza glaberrima ORGLA04G0153500 I 0.712
LPERR04G14700 Leersia perrieri LPERR04G14700 I 0.712
Pavir.Ga01308 Panicum virgatum Pavir.Ga01308 I 0.712
OS04G0508500 Oryza sativa OS04G0508500 I 0.712
OB04G25360 Oryza brachyantha OB04G25360 I 0.712
BGIOSGA014750 Oryza indica BGIOSGA014750 I 0.712
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.711
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I 0.710
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.710
SapurV1A.0021s0310 Salix purpurea SapurV1A.0021s0310 I 0.710
BGIOSGA006030 Oryza indica BGIOSGA006030 I 0.708
OBART02G24300 Oryza barthii OBART02G24300 I 0.708
OB02G31640 Oryza brachyantha OB02G31640 I 0.708
ORGLA02G0210000 Oryza glaberrima ORGLA02G0210000 I 0.708
OS02G0618400 Oryza sativa OS02G0618400 I 0.708
ORUFI02G25650 Oryza rufipogon ORUFI02G25650 I 0.708
MLOC_6786 Hordeum vulgare MLOC_6786 I 0.708
OMERI02G23750 Oryza meridionalis OMERI02G23750 I 0.708
ONIVA09G12460 Oryza nivara ONIVA09G12460 I 0.708
OPUNC02G22200 Oryza punctata OPUNC02G22200 I 0.708
GLYMA18G50891 Glycine max GLYMA18G50891 I 0.707
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.706
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I 0.704
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I 0.704
ATMYB121 Arabidopsis thaliana AT3G30210 D 0.704
GLYMA08G04670 Glycine max GLYMA08G04670 I 0.704
GLYMA05G35050 Glycine max GLYMA05G35050 I 0.704
Carubv10018530m.g Capsella rubella Carubv10018530m.g I 0.704
Bra025410 Brassica rapa Bra025410 I 0.704
Bo7g088650 Brassica oleracea Bo7g088650 I 0.704
Bo9g009020 Brassica oleracea Bo9g009020 I 0.704
Si010822m.g Setaria italica Si010822m.g I 0.703
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.703
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I 0.702
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I 0.701
TCM_018971 Theobroma cacao TCM_018971 I 0.700
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.699
Pm015392 Prunus mume Pm015392 I 0.698
Carubv10021411m.g Capsella rubella Carubv10021411m.g I 0.695
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.695
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.695
Cagra.1111s0025 Capsella grandiflora Cagra.1111s0025 I 0.695
mgf002201m Mimulus guttatus mgf002201m I 0.694
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.694
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.694
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.694
Lus10034372.g Linum usitatissimum Lus10034372.g I 0.689
POPTR_0008s12130 Populus trichocarpa POPTR_0008s12130 I 0.689
VIT_01s0011g03730 Vitis vinifera VIT_01s0011g03730 I 0.688
Ca_05503 Cicer arietinum Ca_05503 I 0.688
LjT44F11.120.nd Lotus japonicus LjT44F11.120.nd I 0.688
GLYMA10G41930 Glycine max GLYMA10G41930 I 0.688
GLYMA20G25110 Glycine max GLYMA20G25110 I 0.688
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.688
Solyc05g009230.1 Solanum lycopersicum Solyc05g009230.1 I 0.688
AMTR_s00039p00172240 Amborella trichopoda AMTR_s00039p00172240 I 0.688
MTR_1g110460 Medicago truncatula MTR_1g110460 I 0.688
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I 0.687
GSMUA_Achr10G19840_001 Musa acuminata GSMUA_Achr10G19840_001 I 0.687
GSMUA_Achr3G01370_001 Musa acuminata GSMUA_Achr3G01370_001 I 0.687
Bra004041 Brassica rapa Bra004041 I 0.686
Bo6g097180 Brassica oleracea Bo6g097180 I 0.686
Lus10005079.g Linum usitatissimum Lus10005079.g I 0.686
Bra033948 Brassica rapa Bra033948 I 0.686
PGSC0003DMG400005641 Solanum tuberosum PGSC0003DMG400005641 I 0.685
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I 0.685
TCM_009642 Theobroma cacao TCM_009642 I 0.685
MYB62 Arabidopsis thaliana AT1G68320 D 0.685
Gorai.002G218600 Gossypium raimondii Gorai.002G218600 I 0.685
MYB62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001171 I 0.685
Bostr.26959s0063 Boechera stricta Bostr.26959s0063 I 0.685
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I 0.685
evm.TU.supercontig_798.1 Carica papaya evm.TU.supercontig_798.1 I 0.685
POPTR_0010s13290 Populus trichocarpa POPTR_0010s13290 I 0.685
Bra004297 Brassica rapa Bra004297 I 0.685
Solyc03g119370.1 Solanum lycopersicum Solyc03g119370.1 I 0.685
SapurV1A.0078s0260 Salix purpurea SapurV1A.0078s0260 I 0.685
Bo6g106730 Brassica oleracea Bo6g106730 I 0.685
Thhalv10018962m.g Eutrema salsugineum Thhalv10018962m.g I 0.685
Lus10041435.g Linum usitatissimum Lus10041435.g I 0.685
Bo2g057760 Brassica oleracea Bo2g057760 I 0.685
GRMZM2G162709 Zea mays GRMZM2G162709 I 0.684
BGIOSGA002469 Oryza indica BGIOSGA002469 I 0.684
OLONG_008024 Oryza longistaminata OLONG_008024 I 0.684
ONIVA01G01990 Oryza nivara ONIVA01G01990 I 0.684
OGLUM01G02010 Oryza glumaepatula OGLUM01G02010 I 0.684
Pavir.Ea00660 Panicum virgatum Pavir.Ea00660 I 0.684
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I 0.684
OB01G11750 Oryza brachyantha OB01G11750 I 0.684
OBART01G01830 Oryza barthii OBART01G01830 I 0.684
OMERI01G01310 Oryza meridionalis OMERI01G01310 I 0.684
LPERR01G01750 Leersia perrieri LPERR01G01750 I 0.684
GRMZM2G096358 Zea mays GRMZM2G096358 I 0.684
Sb03g007360 Sorghum bicolor Sb03g007360 I 0.684
ORGLA01G0016500 Oryza glaberrima ORGLA01G0016500 I 0.684
orange1.1g020603m.g Citrus sinensis orange1.1g020603m.g I 0.683
Ciclev10021157m.g Citrus clementina Ciclev10021157m.g I 0.683
AMTR_s00079p00140660 Amborella trichopoda AMTR_s00079p00140660 I 0.683
GLYMA18G50881 Glycine max GLYMA18G50881 I 0.683
evm.TU.supercontig_14.220 Carica papaya evm.TU.supercontig_14.220 I 0.683
SapurV1A.0530s0020 Salix purpurea SapurV1A.0530s0020 I 0.683
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I 0.683
TCM_012363 Theobroma cacao TCM_012363 I 0.682
gene25149-v1.0-hybrid Fragaria vesca gene25149-v1.0-hybrid I 0.682
cassava12704.valid.m1 Manihot esculenta cassava12704.valid.m1 I 0.682
cassava46139.m1 Manihot esculenta cassava46139.m1 I 0.681
Bra036202 Brassica rapa Bra036202 I 0.681
Lus10034338.g Linum usitatissimum Lus10034338.g I 0.680
GSMUA_Achr3G21060_001 Musa acuminata GSMUA_Achr3G21060_001 I 0.680
Bra012482 Brassica rapa Bra012482 I 0.680
Bo7g050560 Brassica oleracea Bo7g050560 I 0.680
evm.TU.supercontig_3.501 Carica papaya evm.TU.supercontig_3.501 I 0.679
MDP0000286143 Malus domestica MDP0000286143 I 0.679
evm.TU.supercontig_3.502 Carica papaya evm.TU.supercontig_3.502 I 0.679
POPTR_0012s05200 Populus trichocarpa POPTR_0012s05200 I 0.679
SapurV1A.0989s0120 Salix purpurea SapurV1A.0989s0120 I 0.679
POPTR_0015s03770 Populus trichocarpa POPTR_0015s03770 I 0.679
SapurV1A.1621s0010 Salix purpurea SapurV1A.1621s0010 I 0.679
SapurV1A.2885s0020 Salix purpurea SapurV1A.2885s0020 I 0.679
GSMUA_Achr2G22640_001 Musa acuminata GSMUA_Achr2G22640_001 I 0.678
GSMUA_Achr6G09760_001 Musa acuminata GSMUA_Achr6G09760_001 I 0.678
ATMYB121 Vitis vinifera VIT_14s0083g01060 I 0.678
Cla019255 Citrullus lanatus Cla019255 I 0.677
VIT_17s0000g03560 Vitis vinifera VIT_17s0000g03560 I 0.677
TRIUR3_18020 Triticum urartu TRIUR3_18020 I 0.677
PK22268.1 Cannabis sativa PK22268.1 I 0.677
Traes_2AL_605C25CDF Triticum aestivum Traes_2AL_605C25CDF I 0.677
Pm025177 Prunus mume Pm025177 I 0.677
MDP0000259898 Malus domestica MDP0000259898 I 0.677
F775_06959 Aegilops tauschii F775_06959 I 0.677
PRUPE_ppa008877mg Prunus persica PRUPE_ppa008877mg I 0.677
POPTR_0004s11460 Populus trichocarpa POPTR_0004s11460 I 0.674
GSMUA_AchrUn_randomG27010_001 Musa acuminata GSMUA_AchrUn_randomG27010_001 I 0.673
GSMUA_Achr1G21020_001 Musa acuminata GSMUA_Achr1G21020_001 I 0.673
evm.TU.supercontig_145.21 Carica papaya evm.TU.supercontig_145.21 I 0.673
Traes_3DS_A0676BAEA Triticum aestivum Traes_3DS_A0676BAEA I 0.672
F775_23572 Aegilops tauschii F775_23572 I 0.672
Sb09g002680 Sorghum bicolor Sb09g002680 I 0.672
Traes_6DL_FDFCBA57D1 Triticum aestivum Traes_6DL_FDFCBA57D1 I 0.672
Traes_6DL_FDFCBA57D Triticum aestivum Traes_6DL_FDFCBA57D I 0.672
Pavir.J39490 Panicum virgatum Pavir.J39490 I 0.669
Si035722m.g Setaria italica Si035722m.g I 0.669
Pavir.J28445 Panicum virgatum Pavir.J28445 I 0.669
GSMUA_Achr11G13200_001 Musa acuminata GSMUA_Achr11G13200_001 I 0.669
Sb01g037110 Sorghum bicolor Sb01g037110 I 0.669
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I 0.668
TRIUR3_09345 Triticum urartu TRIUR3_09345 I 0.667
Traes_3AS_5E49D47AF Triticum aestivum Traes_3AS_5E49D47AF I 0.667
TRAES3BF034000040CFD_g Triticum aestivum TRAES3BF034000040CFD_g I 0.667
MLOC_65555 Hordeum vulgare MLOC_65555 I 0.667
GSMUA_Achr8G18460_001 Musa acuminata GSMUA_Achr8G18460_001 I 0.667
F775_02803 Aegilops tauschii F775_02803 I 0.667
Eucgr.B03006 Eucalyptus grandis Eucgr.B03006 I 0.666
Si030584m.g Setaria italica Si030584m.g I 0.666
GSMUA_Achr5G21090_001 Musa acuminata GSMUA_Achr5G21090_001 I 0.664
GRMZM2G134279 Zea mays GRMZM2G134279 I 0.664
TRIUR3_31527 Triticum urartu TRIUR3_31527 I 0.663
F775_25534 Aegilops tauschii F775_25534 I 0.663
Traes_6AL_89BA7115C Triticum aestivum Traes_6AL_89BA7115C I 0.663
MLOC_9927 Hordeum vulgare MLOC_9927 I 0.663
cassava28986.valid.m1 Manihot esculenta cassava28986.valid.m1 I 0.662