CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PK26059.1
(
Cannabis sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PK26059.1
T290478_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN
NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.870
0.936
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN
NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.809
0.872
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.805
0.872
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.805
0.872
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.804
0.936
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.802
0.936
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.689
0.851
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.675
0.702
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK26059.1
Myb
258
308
RVVWSVELHQQFVGAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Cannabis sativa
TFs
496 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy