ARR18 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT5G58080 T266571_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00		 Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.689 0.851
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.679 0.830
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.674 0.830
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.671 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02313_2.00 Myb 51 101

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G58080.1 Myb 196 246

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.909
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.870
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.870
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.870
Bo2g028820 Brassica oleracea Bo2g028820 I 0.852
Bra020390 Brassica rapa Bra020390 I 0.852
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.852
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.828
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.828
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.828
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.828
TCM_037098 Theobroma cacao TCM_037098 I 0.817
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.817
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.817
29737.m001227 Ricinus communis 29737.m001227 I 0.817
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.817
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.806
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.806
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.802
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.802
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.802
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.802
Pm027701 Prunus mume Pm027701 I 0.802
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.802
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.802
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.802
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.799
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.780
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.771
MDP0000124301 Malus domestica MDP0000124301 I 0.771
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.771
MDP0000155328 Malus domestica MDP0000155328 I 0.771
Ca_15151 Cicer arietinum Ca_15151 I 0.771
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.771
Pm005877 Prunus mume Pm005877 I 0.769
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.769
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.757
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.757
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.757
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.753
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.746
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.745
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.745
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.744
Ca_14780 Cicer arietinum Ca_14780 I 0.744
TCM_015085 Theobroma cacao TCM_015085 I 0.742
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.740
LjSGA_060038.1 Lotus japonicus LjSGA_060038.1 I 0.722
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.721
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.721
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.717
29848.m004559 Ricinus communis 29848.m004559 I 0.717
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.717
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.717
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.717
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.717
TRIUR3_25232 Triticum urartu TRIUR3_25232 I 0.717
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.717
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.717
F775_03134 Aegilops tauschii F775_03134 I 0.717
F775_03846 Aegilops tauschii F775_03846 I 0.717
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.717
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.717
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.717
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.717
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.717
Pm005710 Prunus mume Pm005710 I 0.717
Cla021325 Citrullus lanatus Cla021325 I 0.717
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.717
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.717
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.717
Ca_03351 Cicer arietinum Ca_03351 I 0.715
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.713
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.713
mgf001591m Mimulus guttatus mgf001591m I 0.713
mgf014863m Mimulus guttatus mgf014863m I 0.713
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.713
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.711
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.711
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.711
Lus10019058.g Linum usitatissimum Lus10019058.g I 0.710
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.709
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.709
TCM_036926 Theobroma cacao TCM_036926 I 0.709
Si006013m.g Setaria italica Si006013m.g I 0.709
Si016546m.g Setaria italica Si016546m.g I 0.709
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.709
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.709
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.709
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.709
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.709
OBART06G05360 Oryza barthii OBART06G05360 I 0.709
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.709
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.709
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.709
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.709
OB02G42700 Oryza brachyantha OB02G42700 I 0.709
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.709
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.709
RR22 Oryza indica BGIOSGA022430 I 0.709
RR23 Oryza indica BGIOSGA005436 I 0.709
F775_14758 Aegilops tauschii F775_14758 I 0.709
F775_19079 Aegilops tauschii F775_19079 I 0.709
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.709
OB06G14930 Oryza brachyantha OB06G14930 I 0.709
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.709
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.709
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.709
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.709
RR23 Oryza sativa OS02G0796500 I 0.709
RR22 Oryza sativa OS06G0183100 I 0.709
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.709
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.709
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.709
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.709
MDP0000311914 Malus domestica MDP0000311914 I 0.707
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.706
Cucsa.350850 Cucumis sativus Cucsa.350850 I 0.705
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I 0.703
CM1729.100.nc Lotus japonicus CM1729.100.nc I 0.703
MTR_2g034960 Medicago truncatula MTR_2g034960 I 0.702
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.702
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.702
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I 0.697
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.697
estExt_fgenesh2_pg.C_Chr_100175 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100175 I 0.697
TRIUR3_30130 Triticum urartu TRIUR3_30130 I 0.695
MTR_1g013180 Medicago truncatula MTR_1g013180 I 0.695
Lus10036303.g Linum usitatissimum Lus10036303.g I 0.695
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.692
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I 0.692
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I 0.692
TRIUR3_31924 Triticum urartu TRIUR3_31924 I 0.692
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I 0.692
F775_13501 Aegilops tauschii F775_13501 I 0.692
MLOC_3955 Hordeum vulgare MLOC_3955 I 0.692
GRMZM2G060485 Zea mays GRMZM2G060485 I 0.692
Si016630m.g Setaria italica Si016630m.g I 0.692
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I 0.692
Sb04g005580 Sorghum bicolor Sb04g005580 I 0.692
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I 0.692
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I 0.692
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I 0.690
Sb03g043080 Sorghum bicolor Sb03g043080 I 0.690
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.689
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.689
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.689
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.689
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.689
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.689
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.689
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.689
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.689
PK26059.1 Cannabis sativa PK26059.1 I 0.689
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.689
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.689
GRMZM2G360523 Zea mays GRMZM2G360523 I 0.689
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.689
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.689
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.689
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.689
29889.m003245 Ricinus communis 29889.m003245 I 0.689
Ca_02989 Cicer arietinum Ca_02989 I 0.689
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.689
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.689
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.689
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.689
TCM_021300 Theobroma cacao TCM_021300 I 0.689
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.689
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.689
MDP0000224740 Malus domestica MDP0000224740 I 0.689
Cla009424 Citrullus lanatus Cla009424 I 0.689
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.689
MDP0000290818 Malus domestica MDP0000290818 I 0.689
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.689
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.689
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.689
Cla022101 Citrullus lanatus Cla022101 I 0.689
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.688
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.686
GRMZM2G471600 Zea mays GRMZM2G471600 I 0.685
PGSC0003DMG400028100 Solanum tuberosum PGSC0003DMG400028100 I 0.685
Solyc10g080960.1 Solanum lycopersicum Solyc10g080960.1 I 0.685
APRR4 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000961 I 0.683
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.683
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.682
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.682
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.682
27647.m000179 Ricinus communis 27647.m000179 I 0.682
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.682
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.682
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.682
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.682
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.682
TCM_011067 Theobroma cacao TCM_011067 I 0.682
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.682
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.682
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.682
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.682
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.682
Ca_20899 Cicer arietinum Ca_20899 I 0.682
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.682
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.681
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.681
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.680
mgf012203m Mimulus guttatus mgf012203m I 0.680
mgf010113m Mimulus guttatus mgf010113m I 0.680
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.680
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.680
OSTLU_5500 Ostreococcus lucimarinus OSTLU_5500 I 0.679
estExt_fgenesh1_pg.C_Chr_16.00010090 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_16.00010090 D 0.679
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.679
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.679
PDK_20s1887621g001 Phoenix dactylifera PDK_20s1887621g001 I 0.678
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.678
chr5.LjT32I14.90.nd Lotus japonicus chr5.LjT32I14.90.nd I 0.678
RR24 Oryza indica BGIOSGA007015 I 0.677
OGLUM02G06200 Oryza glumaepatula OGLUM02G06200 I 0.677
OLONG_007266 Oryza longistaminata OLONG_007266 I 0.677
RR24 Oryza sativa OS02G0182100 I 0.677
OMERI02G07120 Oryza meridionalis OMERI02G07120 I 0.677
ORUFI02G06340 Oryza rufipogon ORUFI02G06340 I 0.677
LPERR02G05460 Leersia perrieri LPERR02G05460 I 0.677
ORGLA02G0057500 Oryza glaberrima ORGLA02G0057500 I 0.677
OBART02G06200 Oryza barthii OBART02G06200 I 0.677
OB02G15530 Oryza brachyantha OB02G15530 I 0.677
ONIVA02G07230 Oryza nivara ONIVA02G07230 I 0.677
SELMODRAFT_444702 Selaginella moellendorffii SELMODRAFT_444702 I 0.677
ARR1 Arabidopsis thaliana AT3G16857 D 0.674
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.674
Bo5g123620 Brassica oleracea Bo5g123620 I 0.674
Bra022183 Brassica rapa Bra022183 I 0.674
Bra001643 Brassica rapa Bra001643 I 0.674
Bo3g068550 Brassica oleracea Bo3g068550 I 0.674
ARR1 Arabidopsis lyrata fgenesh2_kg.3__1853__AT3G16857.2 I 0.674
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.674
MTR_3g106220 Medicago truncatula MTR_3g106220 I 0.674
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.674
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.674
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.671
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.671
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.671
Bo1g055180 Brassica oleracea Bo1g055180 I 0.671
Bra033527 Brassica rapa Bra033527 I 0.671
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.671
Si007844m.g Setaria italica Si007844m.g I 0.671
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.671
Sb05g004150 Sorghum bicolor Sb05g004150 I 0.671
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.670
F775_03300 Aegilops tauschii F775_03300 I 0.669
MTR_1g013170 Medicago truncatula MTR_1g013170 I 0.669
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.669
Aquca_011_00344 Aquilegia coerulea Aquca_011_00344 I 0.668
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.667
GSMUA_Achr11G08310_001 Musa acuminata GSMUA_Achr11G08310_001 I 0.664
evm.TU.supercontig_127.10 Carica papaya evm.TU.supercontig_127.10 I 0.664
GSMUA_Achr3G13400_001 Musa acuminata GSMUA_Achr3G13400_001 I 0.664