CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1887621g001
(
Phoenix dactylifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PDK_20s1887621g001
T291209_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.843
0.915
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.840
0.915
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN
NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.769
0.872
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN
NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.709
0.809
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.678
0.809
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.666
0.787
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.666
0.787
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1887621g001
Myb
107
157
RVVWSVDLHQQFVAAVNQLGVDKAVPKKILELMKVPRLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Phoenix dactylifera
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10016846.g
Linum usitatissimum
Lus10016846.g
I
0.858
Lus10037719.g
Linum usitatissimum
Lus10037719.g
I
0.858
GSMUA_Achr9G16610_001
Musa acuminata
GSMUA_Achr9G16610_001
I
0.858
estExt_Genewise1.C_90203
Chlorella NC64A
estExt_Genewise1.C_90203
I
0.845
Bra001643
Brassica rapa
Bra001643
I
0.843
Bo3g068550
Brassica oleracea
Bo3g068550
I
0.843
Bo5g123620
Brassica oleracea
Bo5g123620
I
0.843
Carubv10013107m.g
Capsella rubella
Carubv10013107m.g
I
0.843
Bra022183
Brassica rapa
Bra022183
I
0.843
ARR1
Arabidopsis thaliana
AT3G16857
D
0.843
Bostr.28625s0008
Boechera stricta
Bostr.28625s0008
I
0.843
Cagra.5497s0018
Capsella grandiflora
Cagra.5497s0018
I
0.843
Bra033527
Brassica rapa
Bra033527
I
0.840
Carubv10007581m.g
Capsella rubella
Carubv10007581m.g
I
0.840
Bostr.30275s0051
Boechera stricta
Bostr.30275s0051
I
0.840
ARR2
Arabidopsis lyrata
scaffold_702902.1
I
0.840
Thhalv10024686m.g
Eutrema salsugineum
Thhalv10024686m.g
I
0.840
Bo1g055180
Brassica oleracea
Bo1g055180
I
0.840
Cagra.0053s0018
Capsella grandiflora
Cagra.0053s0018
I
0.840
Bostr.0556s0001
Boechera stricta
Bostr.0556s0001
I
0.815
PDK_20s13009426g002
Phoenix dactylifera
PDK_20s13009426g002
I
0.797
Thhalv10020213m.g
Eutrema salsugineum
Thhalv10020213m.g
I
0.790
Bo1g123000
Brassica oleracea
Bo1g123000
I
0.790
29848.m004559
Ricinus communis
29848.m004559
I
0.783
Bra012743
Brassica rapa
Bra012743
I
0.780
Bo7g104190
Brassica oleracea
Bo7g104190
I
0.780
SELMODRAFT_450181
Selaginella moellendorffii
SELMODRAFT_450181
I
0.769
TCM_021300
Theobroma cacao
TCM_021300
I
0.769
SELMODRAFT_173793
Selaginella moellendorffii
SELMODRAFT_173793
I
0.769
Solyc01g065540.2
Solanum lycopersicum
Solyc01g065540.2
I
0.769
Gorai.011G196400
Gossypium raimondii
Gorai.011G196400
I
0.769
MDP0000290818
Malus domestica
MDP0000290818
I
0.769
PGSC0003DMG401025624
Solanum tuberosum
PGSC0003DMG401025624
I
0.769
PGSC0003DMG400023534
Solanum tuberosum
PGSC0003DMG400023534
I
0.769
POPTR_0008s22990
Populus trichocarpa
POPTR_0008s22990
I
0.769
POPTR_0010s00320
Populus trichocarpa
POPTR_0010s00320
I
0.769
PK26059.1
Cannabis sativa
PK26059.1
I
0.769
PRUPE_ppa002408mg
Prunus persica
PRUPE_ppa002408mg
I
0.769
MDP0000224740
Malus domestica
MDP0000224740
I
0.769
Ca_02989
Cicer arietinum
Ca_02989
I
0.769
Aquca_003_00615
Aquilegia coerulea
Aquca_003_00615
I
0.769
Gorai.002G029200
Gossypium raimondii
Gorai.002G029200
I
0.769
MTR_4g121020
Medicago truncatula
MTR_4g121020
I
0.769
evm.TU.supercontig_9.105
Carica papaya
evm.TU.supercontig_9.105
I
0.769
Eucgr.A00189
Eucalyptus grandis
Eucgr.A00189
I
0.769
e_gw1.362.4.1
Physcomitrella patens
e_gw1.362.4.1
D
0.769
Cucsa.252760
Cucumis sativus
Cucsa.252760
I
0.769
Cla009424
Citrullus lanatus
Cla009424
I
0.769
Ciclev10004470m.g
Citrus clementina
Ciclev10004470m.g
I
0.769
Cla022101
Citrullus lanatus
Cla022101
I
0.769
29889.m003245
Ricinus communis
29889.m003245
I
0.769
cassava43032.valid.m1
Manihot esculenta
cassava43032.valid.m1
I
0.769
VIT_05s0077g01480
Vitis vinifera
VIT_05s0077g01480
I
0.769
Solyc05g054390.2
Solanum lycopersicum
Solyc05g054390.2
I
0.769
GLYMA07G37220
Glycine max
GLYMA07G37220
I
0.769
GLYMA17G03380
Glycine max
GLYMA17G03380
I
0.769
GLYMA15G15520
Glycine max
GLYMA15G15520
I
0.763
Ca_15151
Cicer arietinum
Ca_15151
I
0.762
ARR14
Vitis vinifera
VIT_01s0011g05830
I
0.762
MDP0000155328
Malus domestica
MDP0000155328
I
0.762
MDP0000124301
Malus domestica
MDP0000124301
I
0.762
AMTR_s00176p00045260
Amborella trichopoda
AMTR_s00176p00045260
I
0.762
orange1.1g005938m.g
Citrus sinensis
orange1.1g005938m.g
I
0.762
TCM_011067
Theobroma cacao
TCM_011067
I
0.762
POPTR_0010s11600
Populus trichocarpa
POPTR_0010s11600
I
0.762
GSMUA_Achr8G30850_001
Musa acuminata
GSMUA_Achr8G30850_001
I
0.762
GSMUA_Achr1G22230_001
Musa acuminata
GSMUA_Achr1G22230_001
I
0.762
Solyc04g008050.2
Solanum lycopersicum
Solyc04g008050.2
I
0.762
PGSC0003DMG400029514
Solanum tuberosum
PGSC0003DMG400029514
I
0.762
GLYMA07G26890
Glycine max
GLYMA07G26890
I
0.762
27647.m000179
Ricinus communis
27647.m000179
I
0.762
GLYMA02G09451
Glycine max
GLYMA02G09451
I
0.762
Aquca_091_00086
Aquilegia coerulea
Aquca_091_00086
I
0.762
Eucgr.G02094
Eucalyptus grandis
Eucgr.G02094
I
0.762
Ciclev10014527m.g
Citrus clementina
Ciclev10014527m.g
I
0.762
SapurV1A.0055s0320
Salix purpurea
SapurV1A.0055s0320
I
0.762
evm.TU.supercontig_2.186
Carica papaya
evm.TU.supercontig_2.186
I
0.762
Gorai.005G156900
Gossypium raimondii
Gorai.005G156900
I
0.762
PRUPE_ppa002493mg
Prunus persica
PRUPE_ppa002493mg
I
0.760
mgf010113m
Mimulus guttatus
mgf010113m
I
0.760
Pm005877
Prunus mume
Pm005877
I
0.760
mgf012203m
Mimulus guttatus
mgf012203m
I
0.760
ARR1
Arabidopsis lyrata
fgenesh2_kg.3__1853__AT3G16857.2
I
0.754
PDK_20s13009423g003
Phoenix dactylifera
PDK_20s13009423g003
I
0.754
Gorai.006G259700
Gossypium raimondii
Gorai.006G259700
I
0.754
SELMODRAFT_187683
Selaginella moellendorffii
SELMODRAFT_187683
I
0.751
SELMODRAFT_418787
Selaginella moellendorffii
SELMODRAFT_418787
I
0.751
gene05178-v1.0-hybrid
Fragaria vesca
gene05178-v1.0-hybrid
I
0.749
MTR_1g032570
Medicago truncatula
MTR_1g032570
I
0.744
Ciclev10007648m.g
Citrus clementina
Ciclev10007648m.g
I
0.742
orange1.1g005719m.g
Citrus sinensis
orange1.1g005719m.g
I
0.742
e_gw1.10.288.1
Physcomitrella patens
e_gw1.10.288.1
I
0.736
Ca_14780
Cicer arietinum
Ca_14780
I
0.735
gene10041-v1.0-hybrid
Fragaria vesca
gene10041-v1.0-hybrid
I
0.732
GSMUA_Achr11G08310_001
Musa acuminata
GSMUA_Achr11G08310_001
I
0.730
SapurV1A.0739s0030
Salix purpurea
SapurV1A.0739s0030
I
0.729
EuGene.0000130210
Micromonas pusilla
EuGene.0000130210
I
0.727
estExt_fgenesh2_pg.C_Chr_100175
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_100175
I
0.727
Cagra.2235s0034
Capsella grandiflora
Cagra.2235s0034
I
0.726
Carubv10018465m.g
Capsella rubella
Carubv10018465m.g
I
0.726
OB06G30440
Oryza brachyantha
OB06G30440
I
0.725
e_gw1.42.55.1
Physcomitrella patens
e_gw1.42.55.1
I
0.725
gw1.31.134.1
Physcomitrella patens
gw1.31.134.1
I
0.725
SELMODRAFT_447635
Selaginella moellendorffii
SELMODRAFT_447635
I
0.724
SELMODRAFT_444702
Selaginella moellendorffii
SELMODRAFT_444702
I
0.724
Cucsa.069440
Cucumis sativus
Cucsa.069440
I
0.723
Ca_09080
Cicer arietinum
Ca_09080
I
0.723
Lus10041020.g
Linum usitatissimum
Lus10041020.g
I
0.723
Lus10005340.g
Linum usitatissimum
Lus10005340.g
I
0.723
GLYMA09G04470
Glycine max
GLYMA09G04470
I
0.720
CHLREDRAFT_113139
Chlamydomonas reinhardtii
CHLREDRAFT_113139
I
0.719
MTR_1g013170
Medicago truncatula
MTR_1g013170
I
0.717
cassava40494.m1
Manihot esculenta
cassava40494.m1
I
0.716
PDK_20s1451831g001
Phoenix dactylifera
PDK_20s1451831g001
I
0.716
e_gw1.16.93.1
Physcomitrella patens
e_gw1.16.93.1
I
0.716
GRMZM2G479110
Zea mays
GRMZM2G479110
I
0.713
Sb04g035980
Sorghum bicolor
Sb04g035980
I
0.713
AMTR_s00086p00182350
Amborella trichopoda
AMTR_s00086p00182350
I
0.711
SELMODRAFT_150746
Selaginella moellendorffii
SELMODRAFT_150746
I
0.709
Ciclev10004989m.g
Citrus clementina
Ciclev10004989m.g
I
0.709
estExt_fgenesh1_pg.C_Chr_16.00010090
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_16.00010090
D
0.709
SELMODRAFT_442188
Selaginella moellendorffii
SELMODRAFT_442188
I
0.709
OSTLU_5500
Ostreococcus lucimarinus
OSTLU_5500
I
0.709
e_gw1.1.649.1
Ostreococcus RCC809
e_gw1.1.649.1
I
0.709
SapurV1A.0347s0250
Salix purpurea
SapurV1A.0347s0250
I
0.705
SapurV1A.0100s0230
Salix purpurea
SapurV1A.0100s0230
I
0.705
Aquca_016_00168
Aquilegia coerulea
Aquca_016_00168
I
0.705
POPTR_0018s11960
Populus trichocarpa
POPTR_0018s11960
I
0.705
POPTR_0006s20220
Populus trichocarpa
POPTR_0006s20220
I
0.705
e_gw1.1.548.1
Coccomyxa subellipsoidea C169
e_gw1.1.548.1
I
0.703
RR22
Oryza indica
BGIOSGA022430
I
0.702
SapurV1A.0015s0530
Salix purpurea
SapurV1A.0015s0530
I
0.702
OPUNC03G08640
Oryza punctata
OPUNC03G08640
I
0.702
F775_19079
Aegilops tauschii
F775_19079
I
0.702
OPUNC06G05150
Oryza punctata
OPUNC06G05150
I
0.702
OB06G14930
Oryza brachyantha
OB06G14930
I
0.702
ONIVA06G06160
Oryza nivara
ONIVA06G06160
I
0.702
BRADI1G69480
Brachypodium distachyon
BRADI1G69480
I
0.702
F775_32153
Aegilops tauschii
F775_32153
I
0.702
OLONG_002370
Oryza longistaminata
OLONG_002370
I
0.702
OMERI03G08390
Oryza meridionalis
OMERI03G08390
I
0.702
OMERI06G06380
Oryza meridionalis
OMERI06G06380
I
0.702
ONIVA06G01160
Oryza nivara
ONIVA06G01160
I
0.702
OGLUM06G05540
Oryza glumaepatula
OGLUM06G05540
I
0.702
RR23
Oryza indica
BGIOSGA005436
I
0.702
OBART03G08950
Oryza barthii
OBART03G08950
I
0.702
OBART06G05360
Oryza barthii
OBART06G05360
I
0.702
OGLUM03G09080
Oryza glumaepatula
OGLUM03G09080
I
0.702
RR21
Oryza indica
BGIOSGA012149
I
0.702
RR23
Oryza sativa
OS02G0796500
I
0.702
TCM_036926
Theobroma cacao
TCM_036926
I
0.702
GRMZM2G126834
Zea mays
GRMZM2G126834
I
0.702
MLOC_61880
Hordeum vulgare
MLOC_61880
I
0.702
Traes_4AS_6486B493A
Triticum aestivum
Traes_4AS_6486B493A
I
0.702
Traes_4BL_941E7DE4D
Triticum aestivum
Traes_4BL_941E7DE4D
I
0.702
Pavir.Ia04946
Panicum virgatum
Pavir.Ia04946
I
0.702
GRMZM2G099797
Zea mays
GRMZM2G099797
I
0.702
Traes_4DL_2527CA8BF
Triticum aestivum
Traes_4DL_2527CA8BF
I
0.702
Pavir.Ib00921
Panicum virgatum
Pavir.Ib00921
I
0.702
Pavir.Da02067
Panicum virgatum
Pavir.Da02067
I
0.702
POPTR_0008s13490
Populus trichocarpa
POPTR_0008s13490
I
0.702
LPERR06G04900
Leersia perrieri
LPERR06G04900
I
0.702
Sb10g005580
Sorghum bicolor
Sb10g005580
I
0.702
Pavir.J35630
Panicum virgatum
Pavir.J35630
I
0.702
Si006013m.g
Setaria italica
Si006013m.g
I
0.702
Si034517m.g
Setaria italica
Si034517m.g
I
0.702
Si016546m.g
Setaria italica
Si016546m.g
I
0.702
Sb01g042400
Sorghum bicolor
Sb01g042400
I
0.702
Traes_7AS_DECB8080D
Triticum aestivum
Traes_7AS_DECB8080D
I
0.702
OB03G19140
Oryza brachyantha
OB03G19140
I
0.702
ORUFI06G05490
Oryza rufipogon
ORUFI06G05490
I
0.702
LPERR03G08040
Leersia perrieri
LPERR03G08040
I
0.702
ORUFI03G09090
Oryza rufipogon
ORUFI03G09090
I
0.702
ORGLA06G0048800
Oryza glaberrima
ORGLA06G0048800
I
0.702
ORGLA02G0311700
Oryza glaberrima
ORGLA02G0311700
I
0.702
ORGLA03G0086800
Oryza glaberrima
ORGLA03G0086800
I
0.702
RR21
Oryza sativa
OS03G0224200
I
0.702
AMTR_s00057p00108840
Amborella trichopoda
AMTR_s00057p00108840
I
0.702
TRIUR3_26858
Triticum urartu
TRIUR3_26858
I
0.702
TRIUR3_25342
Triticum urartu
TRIUR3_25342
I
0.702
Traes_7DS_22DE624A5
Triticum aestivum
Traes_7DS_22DE624A5
I
0.702
Pavir.J08270
Panicum virgatum
Pavir.J08270
I
0.702
TRIUR3_28229
Triticum urartu
TRIUR3_28229
I
0.702
RR22
Oryza sativa
OS06G0183100
I
0.702
OB02G42700
Oryza brachyantha
OB02G42700
I
0.702
MDP0000311914
Malus domestica
MDP0000311914
I
0.698
Gorai.010G243900
Gossypium raimondii
Gorai.010G243900
I
0.695
orange1.1g005465m.g
Citrus sinensis
orange1.1g005465m.g
I
0.694
PDK_20s1782651g001
Phoenix dactylifera
PDK_20s1782651g001
I
0.694
GLYMA14G13320
Glycine max
GLYMA14G13320
I
0.694
GLYMA06G06730
Glycine max
GLYMA06G06730
I
0.694
29737.m001227
Ricinus communis
29737.m001227
I
0.694
GLYMA04G06650
Glycine max
GLYMA04G06650
I
0.694
Cucsa.271670
Cucumis sativus
Cucsa.271670
I
0.694
GLYMA09G14650
Glycine max
GLYMA09G14650
I
0.694
cassava18404.valid.m1
Manihot esculenta
cassava18404.valid.m1
I
0.694
cassava8114.valid.m1
Manihot esculenta
cassava8114.valid.m1
I
0.694
Ciclev10007639m.g
Citrus clementina
Ciclev10007639m.g
I
0.694
cassava18405.valid.m1
Manihot esculenta
cassava18405.valid.m1
I
0.694
Cla021325
Citrullus lanatus
Cla021325
I
0.694
PDK_20s1342911g003
Phoenix dactylifera
PDK_20s1342911g003
I
0.694
TCM_037098
Theobroma cacao
TCM_037098
I
0.694
PDK_20s1362511g001
Phoenix dactylifera
PDK_20s1362511g001
I
0.694
cassava262.valid.m1
Manihot esculenta
cassava262.valid.m1
I
0.694
SapurV1A.0730s0060
Salix purpurea
SapurV1A.0730s0060
I
0.694
GLYMA15G24770
Glycine max
GLYMA15G24770
I
0.694
VIT_04s0008g05900
Vitis vinifera
VIT_04s0008g05900
I
0.694
e_gw1.83.144.1
Volvox carteri
e_gw1.83.144.1
I
0.693
OSTLU_26838
Ostreococcus lucimarinus
OSTLU_26838
I
0.688
chr5.CM0345.260.nd
Lotus japonicus
chr5.CM0345.260.nd
I
0.684
mg021488m
Mimulus guttatus
mg021488m
I
0.682
Gorai.009G061000
Gossypium raimondii
Gorai.009G061000
I
0.680
VIT_11s0206g00060
Vitis vinifera
VIT_11s0206g00060
I
0.679
Eucgr.C00380
Eucalyptus grandis
Eucgr.C00380
I
0.679
evm.TU.supercontig_46.117
Carica papaya
evm.TU.supercontig_46.117
I
0.679
mgf012846m
Mimulus guttatus
mgf012846m
I
0.679
Gorai.009G054200
Gossypium raimondii
Gorai.009G054200
I
0.679
Gorai.004G291100
Gossypium raimondii
Gorai.004G291100
I
0.679
mgf007181m
Mimulus guttatus
mgf007181m
I
0.679
Carubv10026052m.g
Capsella rubella
Carubv10026052m.g
I
0.678
GSMUA_Achr11G05340_001
Musa acuminata
GSMUA_Achr11G05340_001
I
0.678
Cagra.0891s0003
Capsella grandiflora
Cagra.0891s0003
I
0.678
Bostr.26833s0442
Boechera stricta
Bostr.26833s0442
I
0.678
ARR18
Arabidopsis lyrata
Al_scaffold_0008_2276
I
0.678
ARR18
Arabidopsis thaliana
AT5G58080
D
0.678
chr6.CM0037.920.nc
Lotus japonicus
chr6.CM0037.920.nc
I
0.676
Traes_7AS_503B57D77
Triticum aestivum
Traes_7AS_503B57D77
I
0.675
Pavir.Ab00568
Panicum virgatum
Pavir.Ab00568
I
0.669
BRADI3G06120
Brachypodium distachyon
BRADI3G06120
I
0.669
Sb04g005580
Sorghum bicolor
Sb04g005580
I
0.669
MLOC_3955
Hordeum vulgare
MLOC_3955
I
0.669
F775_13501
Aegilops tauschii
F775_13501
I
0.669
GRMZM2G060485
Zea mays
GRMZM2G060485
I
0.669
Traes_6AS_A42E71A00
Triticum aestivum
Traes_6AS_A42E71A00
I
0.669
Si016630m.g
Setaria italica
Si016630m.g
I
0.669
Traes_6BS_B50BEBC7E
Triticum aestivum
Traes_6BS_B50BEBC7E
I
0.669
Eucgr.C04050
Eucalyptus grandis
Eucgr.C04050
I
0.669
Pavir.Aa03151
Panicum virgatum
Pavir.Aa03151
I
0.669
TRIUR3_31924
Triticum urartu
TRIUR3_31924
I
0.669
Traes_6DS_EF4A57213
Triticum aestivum
Traes_6DS_EF4A57213
I
0.669
F775_14758
Aegilops tauschii
F775_14758
I
0.668
GRMZM2G409974
Zea mays
GRMZM2G409974
I
0.668
MLOC_11341
Hordeum vulgare
MLOC_11341
I
0.668
Traes_7DS_327FBC2CA
Triticum aestivum
Traes_7DS_327FBC2CA
I
0.668
1200010147
Ostreococcus tauri
1200010147
I
0.667
ARR14
Arabidopsis thaliana
AT2G01760
D
0.666
ARR14
Arabidopsis lyrata
scaffold_500093.1
I
0.666
mgf018559m
Mimulus guttatus
mgf018559m
I
0.662