Bo1g123000 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo1g123000 T267099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.844 0.956
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.811 0.911
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.701 0.844
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g123000.1 Myb 139 187

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g123620 Brassica oleracea Bo5g123620 I 0.844
Bra001643 Brassica rapa Bra001643 I 0.844
Bra022183 Brassica rapa Bra022183 I 0.844
Thhalv10020213m.g Eutrema salsugineum Thhalv10020213m.g I 0.844
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.844
Bo3g068550 Brassica oleracea Bo3g068550 I 0.844
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.844
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.844
ARR1 Arabidopsis thaliana AT3G16857 D 0.844
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.829
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.829
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.829
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.816
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.811
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.811
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.811
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.811
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.811
Bra033527 Brassica rapa Bra033527 I 0.811
Bo1g055180 Brassica oleracea Bo1g055180 I 0.811
PDK_20s13009426g002 Phoenix dactylifera PDK_20s13009426g002 I 0.807
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.793
PDK_20s1887621g001 Phoenix dactylifera PDK_20s1887621g001 I 0.790
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.786
GSMUA_Achr11G08310_001 Musa acuminata GSMUA_Achr11G08310_001 I 0.782
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I 0.780
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.767
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.766
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.766
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.760
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.755
ARR1 Arabidopsis lyrata fgenesh2_kg.3__1853__AT3G16857.2 I 0.755
29848.m004559 Ricinus communis 29848.m004559 I 0.754
Bo7g104190 Brassica oleracea Bo7g104190 I 0.751
Bra012743 Brassica rapa Bra012743 I 0.751
e_gw1.16.93.1 Physcomitrella patens e_gw1.16.93.1 I 0.747
e_gw1.83.144.1 Volvox carteri e_gw1.83.144.1 I 0.744
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.740
29889.m003245 Ricinus communis 29889.m003245 I 0.740
27647.m000179 Ricinus communis 27647.m000179 I 0.740
MDP0000224740 Malus domestica MDP0000224740 I 0.740
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.740
MDP0000155328 Malus domestica MDP0000155328 I 0.740
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.740
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.740
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.740
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.740
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.740
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.740
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.740
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.740
Cla022101 Citrullus lanatus Cla022101 I 0.740
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.740
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.740
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.740
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.740
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.740
Ca_15151 Cicer arietinum Ca_15151 I 0.740
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.740
Cla009424 Citrullus lanatus Cla009424 I 0.740
TCM_021300 Theobroma cacao TCM_021300 I 0.740
MDP0000124301 Malus domestica MDP0000124301 I 0.740
Ca_02989 Cicer arietinum Ca_02989 I 0.740
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.740
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.740
TCM_011067 Theobroma cacao TCM_011067 I 0.740
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.740
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.740
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.740
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.740
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.740
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.740
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.740
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.740
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.740
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.740
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.740
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.740
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.740
PK26059.1 Cannabis sativa PK26059.1 I 0.740
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.740
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.740
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.740
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.740
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.740
MDP0000290818 Malus domestica MDP0000290818 I 0.740
mgf010113m Mimulus guttatus mgf010113m I 0.738
Pm005877 Prunus mume Pm005877 I 0.738
mgf012203m Mimulus guttatus mgf012203m I 0.738
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.738
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.734
VIT_07s0005g01010 Vitis vinifera VIT_07s0005g01010 I 0.734
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.732
e_gw1.10.288.1 Physcomitrella patens e_gw1.10.288.1 I 0.726
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.725
MDP0000311914 Malus domestica MDP0000311914 I 0.722
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.722
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.720
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.720
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.713
Ca_14780 Cicer arietinum Ca_14780 I 0.706
CHLREDRAFT_113139 Chlamydomonas reinhardtii CHLREDRAFT_113139 I 0.705
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.704
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.704
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.703
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.701
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.700
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.699
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.699
e_gw1.42.55.1 Physcomitrella patens e_gw1.42.55.1 I 0.696
gw1.31.134.1 Physcomitrella patens gw1.31.134.1 I 0.696
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.694
Lus10041020.g Linum usitatissimum Lus10041020.g I 0.694
Lus10005340.g Linum usitatissimum Lus10005340.g I 0.694
Ca_09080 Cicer arietinum Ca_09080 I 0.694
Traes_7AS_1318B59D3 Triticum aestivum Traes_7AS_1318B59D3 I 0.693
Traes_7BS_17C8D2707 Triticum aestivum Traes_7BS_17C8D2707 I 0.693
evm.TU.supercontig_127.10 Carica papaya evm.TU.supercontig_127.10 I 0.692
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.691
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.688
MTR_1g013170 Medicago truncatula MTR_1g013170 I 0.688
SELMODRAFT_444702 Selaginella moellendorffii SELMODRAFT_444702 I 0.686
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.683
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.683
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.683
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.683
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.683
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.683
mg021488m Mimulus guttatus mg021488m I 0.680
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.680
Ciclev10004989m.g Citrus clementina Ciclev10004989m.g I 0.680
RR21 Oryza indica BGIOSGA012149 I 0.680
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.680
Si034517m.g Setaria italica Si034517m.g I 0.680
OLONG_002370 Oryza longistaminata OLONG_002370 I 0.680
SapurV1A.0015s0530 Salix purpurea SapurV1A.0015s0530 I 0.680
OMERI03G08390 Oryza meridionalis OMERI03G08390 I 0.680
ONIVA06G01160 Oryza nivara ONIVA06G01160 I 0.680
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.680
Pavir.Ib00921 Panicum virgatum Pavir.Ib00921 I 0.680
OGLUM03G09080 Oryza glumaepatula OGLUM03G09080 I 0.680
OBART03G08950 Oryza barthii OBART03G08950 I 0.680
GRMZM2G126834 Zea mays GRMZM2G126834 I 0.680
GRMZM2G099797 Zea mays GRMZM2G099797 I 0.680
BRADI1G69480 Brachypodium distachyon BRADI1G69480 I 0.680
LPERR03G08040 Leersia perrieri LPERR03G08040 I 0.680
OB03G19140 Oryza brachyantha OB03G19140 I 0.680
Pavir.Ia04946 Panicum virgatum Pavir.Ia04946 I 0.680
OPUNC03G08640 Oryza punctata OPUNC03G08640 I 0.680
Traes_4AS_6486B493A Triticum aestivum Traes_4AS_6486B493A I 0.680
Sb01g042400 Sorghum bicolor Sb01g042400 I 0.680
Traes_4BL_941E7DE4D Triticum aestivum Traes_4BL_941E7DE4D I 0.680
Traes_4DL_2527CA8BF Triticum aestivum Traes_4DL_2527CA8BF I 0.680
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.680
TRIUR3_25342 Triticum urartu TRIUR3_25342 I 0.680
POPTR_0008s13490 Populus trichocarpa POPTR_0008s13490 I 0.680
F775_32153 Aegilops tauschii F775_32153 I 0.680
ORGLA03G0086800 Oryza glaberrima ORGLA03G0086800 I 0.680
ORUFI03G09090 Oryza rufipogon ORUFI03G09090 I 0.680
RR21 Oryza sativa OS03G0224200 I 0.680
LjSGA_060038.1 Lotus japonicus LjSGA_060038.1 I 0.678
OSTLU_26838 Ostreococcus lucimarinus OSTLU_26838 I 0.675
Ciclev10005747m.g Citrus clementina Ciclev10005747m.g I 0.675
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.673
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.673
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.673
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.673
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.673
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.673
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.673
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.673
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.673
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.673
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.673
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.673
RR22 Oryza sativa OS06G0183100 I 0.673
RR23 Oryza sativa OS02G0796500 I 0.673
OLONG_005451 Oryza longistaminata OLONG_005451 I 0.673
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.673
F775_19079 Aegilops tauschii F775_19079 I 0.673
RR22 Oryza indica BGIOSGA022430 I 0.673
RR23 Oryza indica BGIOSGA005436 I 0.673
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.673
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.673
OBART06G05360 Oryza barthii OBART06G05360 I 0.673
OB06G14930 Oryza brachyantha OB06G14930 I 0.673
OB02G42700 Oryza brachyantha OB02G42700 I 0.673
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.673
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.673
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.673
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.673
Si006013m.g Setaria italica Si006013m.g I 0.673
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.673
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.673
Si016546m.g Setaria italica Si016546m.g I 0.673
TCM_036926 Theobroma cacao TCM_036926 I 0.673
GSMUA_AchrUn_randomG18820_001 Musa acuminata GSMUA_AchrUn_randomG18820_001 I 0.666
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.665
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.665
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.665
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.665
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.665
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.665
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.665
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.665
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.665
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.665
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.665
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.665
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.665
TCM_037098 Theobroma cacao TCM_037098 I 0.665
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.665
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.665
Cla021325 Citrullus lanatus Cla021325 I 0.665
29737.m001227 Ricinus communis 29737.m001227 I 0.665
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.665
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.665
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.665
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.665