LjSGA_066155.1 (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 LjSGA_066155.1 T290991_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.746 0.809
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.692 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_066155.1 Myb 160 210

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.856
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.826
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.820
TCM_037098 Theobroma cacao TCM_037098 I 0.820
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.820
29737.m001227 Ricinus communis 29737.m001227 I 0.820
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.820
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.820
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.820
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.820
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.820
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.818
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.808
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.808
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.804
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.804
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.804
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.804
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.788
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.788
Bra020390 Brassica rapa Bra020390 I 0.786
Bo2g028820 Brassica oleracea Bo2g028820 I 0.786
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.786
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.786
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.786
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.786
MDP0000311914 Malus domestica MDP0000311914 I 0.781
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.781
LjSGA_060038.1 Lotus japonicus LjSGA_060038.1 I 0.777
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.770
Pm027701 Prunus mume Pm027701 I 0.770
Ca_14780 Cicer arietinum Ca_14780 I 0.765
Ca_15151 Cicer arietinum Ca_15151 I 0.763
MDP0000124301 Malus domestica MDP0000124301 I 0.763
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.763
MDP0000155328 Malus domestica MDP0000155328 I 0.763
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.763
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.761
Pm005877 Prunus mume Pm005877 I 0.761
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.760
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.760
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.760
APRR4 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000961 I 0.748
ARR18 Arabidopsis thaliana AT5G58080 D 0.746
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.746
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.737
TCM_015085 Theobroma cacao TCM_015085 I 0.728
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.724
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.721
29848.m004559 Ricinus communis 29848.m004559 I 0.719
Cla021325 Citrullus lanatus Cla021325 I 0.719
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.719
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.719
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.719
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.719
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.719
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.719
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.719
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.719
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.719
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.719
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.719
evm.TU.supercontig_127.10 Carica papaya evm.TU.supercontig_127.10 I 0.719
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.719
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.719
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.719
GSMUA_Achr11G08310_001 Musa acuminata GSMUA_Achr11G08310_001 I 0.719
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.715
MTR_3g106220 Medicago truncatula MTR_3g106220 I 0.713
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.713
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.711
Si016546m.g Setaria italica Si016546m.g I 0.711
Si006013m.g Setaria italica Si006013m.g I 0.711
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.711
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.711
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.711
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.711
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.711
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.711
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.711
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.711
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.711
Traes_7AS_1318B59D3 Triticum aestivum Traes_7AS_1318B59D3 I 0.711
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.711
TCM_036926 Theobroma cacao TCM_036926 I 0.711
Traes_7BS_17C8D2707 Triticum aestivum Traes_7BS_17C8D2707 I 0.711
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.711
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.711
OLONG_005451 Oryza longistaminata OLONG_005451 I 0.711
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.711
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.711
RR23 Oryza sativa OS02G0796500 I 0.711
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.711
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.711
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.711
OBART06G05360 Oryza barthii OBART06G05360 I 0.711
RR22 Oryza indica BGIOSGA022430 I 0.711
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.711
F775_19079 Aegilops tauschii F775_19079 I 0.711
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.711
RR23 Oryza indica BGIOSGA005436 I 0.711
OB06G14930 Oryza brachyantha OB06G14930 I 0.711
OB02G42700 Oryza brachyantha OB02G42700 I 0.711
RR22 Oryza sativa OS06G0183100 I 0.711
Cucsa.350850 Cucumis sativus Cucsa.350850 I 0.708
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I 0.706
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I 0.702
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.699
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.699
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.699
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.696
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.696
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.696
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.696
TRIUR3_31924 Triticum urartu TRIUR3_31924 I 0.695
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I 0.695
GRMZM2G060485 Zea mays GRMZM2G060485 I 0.695
Sb04g005580 Sorghum bicolor Sb04g005580 I 0.695
Si016630m.g Setaria italica Si016630m.g I 0.695
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I 0.695
F775_13501 Aegilops tauschii F775_13501 I 0.695
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I 0.695
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I 0.695
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I 0.695
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I 0.695
MLOC_3955 Hordeum vulgare MLOC_3955 I 0.695
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.693
Lus10019058.g Linum usitatissimum Lus10019058.g I 0.693
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.692
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.692
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.692
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.692
Bo1g055180 Brassica oleracea Bo1g055180 I 0.692
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.692
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.692
Bra033527 Brassica rapa Bra033527 I 0.692
MTR_2g034960 Medicago truncatula MTR_2g034960 I 0.688
F775_03846 Aegilops tauschii F775_03846 I 0.685
F775_03134 Aegilops tauschii F775_03134 I 0.685
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.685
TRIUR3_25232 Triticum urartu TRIUR3_25232 I 0.685
Lus10036303.g Linum usitatissimum Lus10036303.g I 0.685
GSMUA_Achr3G13400_001 Musa acuminata GSMUA_Achr3G13400_001 I 0.685
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.685
Pm005710 Prunus mume Pm005710 I 0.685
Ca_03351 Cicer arietinum Ca_03351 I 0.684
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I 0.682
mgf014863m Mimulus guttatus mgf014863m I 0.681
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.681
mgf001591m Mimulus guttatus mgf001591m I 0.681
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.681
ORGLA02G0057500 Oryza glaberrima ORGLA02G0057500 I 0.679
OB02G15530 Oryza brachyantha OB02G15530 I 0.679
OGLUM02G06200 Oryza glumaepatula OGLUM02G06200 I 0.679
OLONG_007266 Oryza longistaminata OLONG_007266 I 0.679
LPERR02G05460 Leersia perrieri LPERR02G05460 I 0.679
OBART02G06200 Oryza barthii OBART02G06200 I 0.679
ONIVA02G07230 Oryza nivara ONIVA02G07230 I 0.679
ORUFI02G06340 Oryza rufipogon ORUFI02G06340 I 0.679
OMERI02G07120 Oryza meridionalis OMERI02G07120 I 0.679
RR24 Oryza indica BGIOSGA007015 I 0.679
RR24 Oryza sativa OS02G0182100 I 0.679
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.677
GSMUA_AchrUn_randomG18820_001 Musa acuminata GSMUA_AchrUn_randomG18820_001 I 0.677
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.677
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.677
F775_14758 Aegilops tauschii F775_14758 I 0.677
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.677
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.674
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.674
MDP0000290818 Malus domestica MDP0000290818 I 0.674
Ca_02989 Cicer arietinum Ca_02989 I 0.674
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.674
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.674
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.674
MDP0000224740 Malus domestica MDP0000224740 I 0.674
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.674
TCM_011067 Theobroma cacao TCM_011067 I 0.674
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.674
PK26059.1 Cannabis sativa PK26059.1 I 0.674
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.674
TCM_021300 Theobroma cacao TCM_021300 I 0.674
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.674
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.674
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.674
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.674
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.674
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.674
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.674
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.674
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.674
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.674
29889.m003245 Ricinus communis 29889.m003245 I 0.674
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.674
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.674
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.674
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.674
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.674
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.674
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.674
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.674
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.674
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.674
Cla009424 Citrullus lanatus Cla009424 I 0.674
27647.m000179 Ricinus communis 27647.m000179 I 0.674
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.674
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.674
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.674
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.674
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.674
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.674
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.674
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.674
Cla022101 Citrullus lanatus Cla022101 I 0.674
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.674
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.674
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.674
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.674
Bo1g123000 Brassica oleracea Bo1g123000 I 0.673
mgf010113m Mimulus guttatus mgf010113m I 0.671
mgf012203m Mimulus guttatus mgf012203m I 0.671
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.670
e_gw1.83.144.1 Volvox carteri e_gw1.83.144.1 I 0.669
Ca_20899 Cicer arietinum Ca_20899 I 0.668
PDK_20s13009426g002 Phoenix dactylifera PDK_20s13009426g002 I 0.668
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.667
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.664
TRIUR3_30130 Triticum urartu TRIUR3_30130 I 0.663