Lus10036303.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10036303.g T288170_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.695 0.745
PK07924.1
M01278_2.00 		Cannabis sativa
NGATHYNNN
NNNRDATCN		 PBM
Lambert et al.(2019)
pTH11431 		0.677 0.745
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.672 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10036303 Myb 226 276

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10019058.g Linum usitatissimum Lus10019058.g I 0.860
MTR_1g013180 Medicago truncatula MTR_1g013180 I 0.791
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.736
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.736
CM1729.100.nc Lotus japonicus CM1729.100.nc I 0.735
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.731
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.717
GRMZM2G360523 Zea mays GRMZM2G360523 I 0.711
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.710
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.702
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.702
Thhalv10000098m.g Eutrema salsugineum Thhalv10000098m.g I 0.702
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.702
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.702
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.699
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.698
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.698
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.695
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.695
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.695
Bo2g028820 Brassica oleracea Bo2g028820 I 0.695
29737.m001227 Ricinus communis 29737.m001227 I 0.695
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I 0.695
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.695
TCM_037098 Theobroma cacao TCM_037098 I 0.695
ARR18 Arabidopsis thaliana AT5G58080 D 0.695
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.695
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.695
Bra020390 Brassica rapa Bra020390 I 0.695
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.695
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I 0.695
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.695
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.692
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.692
TCM_036926 Theobroma cacao TCM_036926 I 0.692
OBART06G05360 Oryza barthii OBART06G05360 I 0.692
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.692
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.692
RR23 Oryza sativa OS02G0796500 I 0.692
RR22 Oryza sativa OS06G0183100 I 0.692
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.692
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.692
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.692
Si006013m.g Setaria italica Si006013m.g I 0.692
OB06G14930 Oryza brachyantha OB06G14930 I 0.692
Si016546m.g Setaria italica Si016546m.g I 0.692
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.692
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.692
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.692
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.692
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.692
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.692
OB02G42700 Oryza brachyantha OB02G42700 I 0.692
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.692
F775_19079 Aegilops tauschii F775_19079 I 0.692
RR23 Oryza indica BGIOSGA005436 I 0.692
RR22 Oryza indica BGIOSGA022430 I 0.692
F775_14758 Aegilops tauschii F775_14758 I 0.692
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.692
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.692
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.692
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.692
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.692
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.692
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.692
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.692
Sb03g043080 Sorghum bicolor Sb03g043080 I 0.688
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I 0.688
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I 0.688
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I 0.688
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I 0.688
Pavir.J23046 Panicum virgatum Pavir.J23046 I 0.688
Si000815m.g Setaria italica Si000815m.g I 0.688
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I 0.688
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I 0.688
OLONG_004141 Oryza longistaminata OLONG_004141 I 0.688
OBART01G40940 Oryza barthii OBART01G40940 I 0.688
OMERI01G37950 Oryza meridionalis OMERI01G37950 I 0.688
ONIVA01G45980 Oryza nivara ONIVA01G45980 I 0.688
F775_27736 Aegilops tauschii F775_27736 I 0.688
OB01G49660 Oryza brachyantha OB01G49660 I 0.688
GRMZM2G100318 Zea mays GRMZM2G100318 I 0.688
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I 0.688
GRMZM2G177220 Zea mays GRMZM2G177220 I 0.688
LPERR01G35510 Leersia perrieri LPERR01G35510 I 0.688
MLOC_23250 Hordeum vulgare MLOC_23250 I 0.688
OPUNC01G39740 Oryza punctata OPUNC01G39740 I 0.688
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I 0.688
RR26 Oryza sativa OS01G0904700 I 0.688
BGIOSGA000304 Oryza indica BGIOSGA000304 I 0.688
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I 0.688
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I 0.688
Bra032035 Brassica rapa Bra032035 I 0.687
Bo4g157430 Brassica oleracea Bo4g157430 I 0.687
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.685
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.684
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.684
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.684
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.684
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.684
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.684
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.684
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.684
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.684
Pm005710 Prunus mume Pm005710 I 0.684
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.684
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.684
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.684
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.684
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.684
PK09202.1 Cannabis sativa PK09202.1 I 0.684
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.684
29848.m004559 Ricinus communis 29848.m004559 I 0.684
Cla021325 Citrullus lanatus Cla021325 I 0.684
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.684
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.683
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.680
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.680
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.680
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.680
mgf001591m Mimulus guttatus mgf001591m I 0.680
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.680
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.680
mgf014863m Mimulus guttatus mgf014863m I 0.680
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.680
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.680
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.680
Pm027701 Prunus mume Pm027701 I 0.680
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.680
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.679
GLYMA11G37480 Glycine max GLYMA11G37480 I 0.677
ARR11 Vitis vinifera VIT_01s0010g02230 I 0.677
PK07924.1 Cannabis sativa PK07924.1 D 0.677
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I 0.677
MTR_8g079940 Medicago truncatula MTR_8g079940 I 0.677
GLYMA18G01434 Glycine max GLYMA18G01434 I 0.677
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I 0.677
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I 0.677
MTR_3g106220 Medicago truncatula MTR_3g106220 I 0.677
MDP0000320381 Malus domestica MDP0000320381 I 0.677
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I 0.677
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I 0.677
orange1.1g007940m.g Citrus sinensis orange1.1g007940m.g I 0.677
Cucsa.394720 Cucumis sativus Cucsa.394720 I 0.677
Cla023064 Citrullus lanatus Cla023064 I 0.677
Pm006838 Prunus mume Pm006838 I 0.677
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I 0.677
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I 0.677
TCM_010701 Theobroma cacao TCM_010701 I 0.677
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I 0.677
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I 0.677
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I 0.677
GLYMA05G27670 Glycine max GLYMA05G27670 I 0.677
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I 0.677
GLYMA08G10650 Glycine max GLYMA08G10650 I 0.677
MTR_3g086100 Medicago truncatula MTR_3g086100 I 0.675
chr5.LjT32I14.90.nd Lotus japonicus chr5.LjT32I14.90.nd I 0.674
PGSC0003DMG400028100 Solanum tuberosum PGSC0003DMG400028100 I 0.673
GRMZM2G471600 Zea mays GRMZM2G471600 I 0.673
Solyc10g080960.1 Solanum lycopersicum Solyc10g080960.1 I 0.673
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.672
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.672
Si007844m.g Setaria italica Si007844m.g I 0.672
Bra033527 Brassica rapa Bra033527 I 0.672
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.672
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.672
Bo1g055180 Brassica oleracea Bo1g055180 I 0.672
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.672
MTR_2g450070 Medicago truncatula MTR_2g450070 N 0.671
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.671
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I 0.670
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I 0.664
Sb05g004150 Sorghum bicolor Sb05g004150 I 0.664
mgf000016m Mimulus guttatus mgf000016m I 0.662
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.661
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.661
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.661
TCM_011067 Theobroma cacao TCM_011067 I 0.661
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.661
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.661
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.661
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.661
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.661
27647.m000179 Ricinus communis 27647.m000179 I 0.661
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.661
Ca_15151 Cicer arietinum Ca_15151 I 0.661
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.661
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.661
Pavir.J10177 Panicum virgatum Pavir.J10177 N 0.661
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.661
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.661
Pavir.Db00757 Panicum virgatum Pavir.Db00757 N 0.661
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.661
MDP0000124301 Malus domestica MDP0000124301 I 0.661
MDP0000155328 Malus domestica MDP0000155328 I 0.661
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.661
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.661