Ca_20899 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_20899 T283097_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.682 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_20899 Myb 188 238

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.827
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.802
TCM_015085 Theobroma cacao TCM_015085 I 0.775
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.760
mgf018042m Mimulus guttatus mgf018042m N 0.754
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.753
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.746
TRIUR3_30130 Triticum urartu TRIUR3_30130 I 0.743
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.736
Thhalv10016040m.g Eutrema salsugineum Thhalv10016040m.g N 0.736
mgf019327m Mimulus guttatus mgf019327m N 0.736
30147.m014309 Ricinus communis 30147.m014309 N 0.736
Bo9g175250 Brassica oleracea Bo9g175250 N 0.736
Bra009284 Brassica rapa Bra009284 N 0.736
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.736
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.729
Carubv10003421m.g Capsella rubella Carubv10003421m.g N 0.728
ARR21 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000557 N 0.728
Bostr.13129s0247 Boechera stricta Bostr.13129s0247 N 0.728
Carubv10007858m.g Capsella rubella Carubv10007858m.g N 0.725
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.722
MDP0000124301 Malus domestica MDP0000124301 I 0.722
MDP0000155328 Malus domestica MDP0000155328 I 0.722
Ca_15151 Cicer arietinum Ca_15151 I 0.722
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.722
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.722
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.721
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.721
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.721
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.721
TRIUR3_25232 Triticum urartu TRIUR3_25232 I 0.721
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.721
TCM_037098 Theobroma cacao TCM_037098 I 0.721
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.721
F775_03846 Aegilops tauschii F775_03846 I 0.721
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.721
F775_03134 Aegilops tauschii F775_03134 I 0.721
Bo2g028820 Brassica oleracea Bo2g028820 I 0.721
Bra020390 Brassica rapa Bra020390 I 0.721
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.721
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.721
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.721
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.721
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.721
29737.m001227 Ricinus communis 29737.m001227 I 0.721
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.721
Pm005877 Prunus mume Pm005877 I 0.720
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.720
Ca_14780 Cicer arietinum Ca_14780 I 0.719
Bra005928 Brassica rapa Bra005928 N 0.716
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.714
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.714
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.714
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.714
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.714
Carubv10006317m.g Capsella rubella Carubv10006317m.g N 0.708
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.707
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.706
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.706
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.706
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.706
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.706
Pm027701 Prunus mume Pm027701 I 0.706
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.706
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.706
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.706
MDP0000228719 Malus domestica MDP0000228719 N 0.705
Cla007104 Citrullus lanatus Cla007104 N 0.700
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.700
cassava21270.m1 Manihot esculenta cassava21270.m1 N 0.699
Bo2g007540 Brassica oleracea Bo2g007540 N 0.697
Bra028705 Brassica rapa Bra028705 N 0.697
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.690
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.690
Cucsa.251000 Cucumis sativus Cucsa.251000 N 0.690
Cla006313 Citrullus lanatus Cla006313 N 0.690
ARR21 Arabidopsis thaliana AT5G07210 N 0.689
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.688
ARR18 Arabidopsis thaliana AT5G58080 D 0.682
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.682
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.682
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.682
MTR_2g034960 Medicago truncatula MTR_2g034960 I 0.677
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.677
Cagra.6496s0001 Capsella grandiflora Cagra.6496s0001 N 0.676
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.676
MDP0000311914 Malus domestica MDP0000311914 I 0.676
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.674
F775_03300 Aegilops tauschii F775_03300 I 0.669
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.669
LjSGA_066155.1 Lotus japonicus LjSGA_066155.1 I 0.668
Bo3g004250 Brassica oleracea Bo3g004250 N 0.663
Cucsa.362450 Cucumis sativus Cucsa.362450 N 0.662
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.661
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.661
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.661