gene13325-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene13325-v1.0-hybrid T287301_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13325.1-v1.0-hybrid Myb 186 236

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014309 Ricinus communis 30147.m014309 N 0.860
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.860
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.845
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.845
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.823
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.800
mgf018042m Mimulus guttatus mgf018042m N 0.782
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.780
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.780
cassava21270.m1 Manihot esculenta cassava21270.m1 N 0.774
Bra009284 Brassica rapa Bra009284 N 0.765
Thhalv10016040m.g Eutrema salsugineum Thhalv10016040m.g N 0.765
Bo9g175250 Brassica oleracea Bo9g175250 N 0.765
TCM_015085 Theobroma cacao TCM_015085 I 0.760
POPTR_0012s13900 Populus trichocarpa POPTR_0012s13900 N 0.758
Carubv10003421m.g Capsella rubella Carubv10003421m.g N 0.757
ARR21 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000557 N 0.757
Bostr.13129s0247 Boechera stricta Bostr.13129s0247 N 0.757
Cla006313 Citrullus lanatus Cla006313 N 0.754
Cucsa.251000 Cucumis sativus Cucsa.251000 N 0.754
Carubv10007858m.g Capsella rubella Carubv10007858m.g N 0.754
Cagra.6496s0001 Capsella grandiflora Cagra.6496s0001 N 0.754
mgf019327m Mimulus guttatus mgf019327m N 0.748
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.745
Carubv10006317m.g Capsella rubella Carubv10006317m.g N 0.737
Ca_20899 Cicer arietinum Ca_20899 I 0.736
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.733
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.733
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.733
GSMUA_Achr10G23650_001 Musa acuminata GSMUA_Achr10G23650_001 N 0.730
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.727
Bra028705 Brassica rapa Bra028705 N 0.726
Bo2g007540 Brassica oleracea Bo2g007540 N 0.726
ARR21 Arabidopsis thaliana AT5G07210 N 0.718
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.713
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N 0.711
SapurV1A.0400s0190 Salix purpurea SapurV1A.0400s0190 N 0.709
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.709
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.703
MDP0000228719 Malus domestica MDP0000228719 N 0.699
Cla007104 Citrullus lanatus Cla007104 N 0.693
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.693
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.691
TRIUR3_30130 Triticum urartu TRIUR3_30130 I 0.683
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.682
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.680
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.674
MDP0000155328 Malus domestica MDP0000155328 I 0.674
MDP0000124301 Malus domestica MDP0000124301 I 0.674
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.674
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.674
Ca_15151 Cicer arietinum Ca_15151 I 0.674
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.673
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.673
Bra020390 Brassica rapa Bra020390 I 0.673
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.673
29737.m001227 Ricinus communis 29737.m001227 I 0.673
Bo2g028820 Brassica oleracea Bo2g028820 I 0.673
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.673
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.673
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.673
TCM_037098 Theobroma cacao TCM_037098 I 0.673
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.673
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.671
Ca_14780 Cicer arietinum Ca_14780 I 0.671
Pm005877 Prunus mume Pm005877 I 0.671
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.669
Bra005928 Brassica rapa Bra005928 N 0.667
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.665
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.665
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.665
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.665
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.665
mgf008790m Mimulus guttatus mgf008790m I 0.665
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.665
ARR13 Arabidopsis thaliana AT2G27070 N 0.663
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.661
TRIUR3_25232 Triticum urartu TRIUR3_25232 I 0.661
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.661
TRIUR3_20429 Triticum urartu TRIUR3_20429 I 0.661
F775_03846 Aegilops tauschii F775_03846 I 0.661
F775_03134 Aegilops tauschii F775_03134 I 0.661