cassava35050.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava35050.m1 T284214_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava35050.m1 Myb 206 256

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.887
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.887
30147.m014309 Ricinus communis 30147.m014309 N 0.872
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.823
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.823
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.822
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.822
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.813
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.812
cassava21270.m1 Manihot esculenta cassava21270.m1 N 0.811
POPTR_0012s13900 Populus trichocarpa POPTR_0012s13900 N 0.792
Cucsa.251000 Cucumis sativus Cucsa.251000 N 0.781
Cla006313 Citrullus lanatus Cla006313 N 0.781
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.779
Cla007104 Citrullus lanatus Cla007104 N 0.779
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.760
mgf019327m Mimulus guttatus mgf019327m N 0.760
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N 0.760
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.756
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.746
mgf018042m Mimulus guttatus mgf018042m N 0.745
TCM_015085 Theobroma cacao TCM_015085 I 0.745
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.744
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.739
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.739
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.739
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.736
mgf008790m Mimulus guttatus mgf008790m I 0.735
Bra009284 Brassica rapa Bra009284 N 0.729
Bo9g175250 Brassica oleracea Bo9g175250 N 0.729
Thhalv10016040m.g Eutrema salsugineum Thhalv10016040m.g N 0.729
SapurV1A.0400s0190 Salix purpurea SapurV1A.0400s0190 N 0.721
Bostr.13129s0247 Boechera stricta Bostr.13129s0247 N 0.720
ARR21 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000557 N 0.720
Carubv10003421m.g Capsella rubella Carubv10003421m.g N 0.720
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.718
Carubv10007858m.g Capsella rubella Carubv10007858m.g N 0.717
Cagra.6496s0001 Capsella grandiflora Cagra.6496s0001 N 0.717
MDP0000228719 Malus domestica MDP0000228719 N 0.711
Cucsa.362450 Cucumis sativus Cucsa.362450 N 0.710
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.702
Ca_20899 Cicer arietinum Ca_20899 I 0.700
Carubv10006317m.g Capsella rubella Carubv10006317m.g N 0.700
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.697
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.694
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.694
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.694
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.694
Pm027701 Prunus mume Pm027701 I 0.694
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.694
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.694
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.694
gw1.104.128.1 Physcomitrella patens gw1.104.128.1 I 0.689
EuGene.0000090108 Micromonas pusilla EuGene.0000090108 I 0.689
gw1.27.80.1 Physcomitrella patens gw1.27.80.1 I 0.689
gw1.29.164.1 Physcomitrella patens gw1.29.164.1 I 0.689
gw1.29.165.1 Physcomitrella patens gw1.29.165.1 I 0.689
POPTR_0016s03240 Populus trichocarpa POPTR_0016s03240 I 0.689
Pavir.J10623 Panicum virgatum Pavir.J10623 I 0.689
SapurV1A.0159s0180 Salix purpurea SapurV1A.0159s0180 I 0.689
Pavir.J06465 Panicum virgatum Pavir.J06465 I 0.689
LPERR01G31830 Leersia perrieri LPERR01G31830 I 0.689
MLOC_24962 Hordeum vulgare MLOC_24962 I 0.689
F775_08927 Aegilops tauschii F775_08927 I 0.689
BRADI2G54787 Brachypodium distachyon BRADI2G54787 I 0.689
BGIOSGA004786 Oryza indica BGIOSGA004786 I 0.689
AMTR_s00101p00128190 Amborella trichopoda AMTR_s00101p00128190 I 0.689
Bo2g007540 Brassica oleracea Bo2g007540 N 0.689
SapurV1A.1916s0020 Salix purpurea SapurV1A.1916s0020 I 0.689
Bra028705 Brassica rapa Bra028705 N 0.689
EuGene.0600010100 Micromonas sp RCC299 EuGene.0600010100 I 0.689
OBART01G37040 Oryza barthii OBART01G37040 I 0.689
POPTR_0006s03340 Populus trichocarpa POPTR_0006s03340 I 0.689
OS01G0844900 Oryza sativa OS01G0844900 I 0.689
Sb03g039610 Sorghum bicolor Sb03g039610 I 0.689
SELMODRAFT_36646 Selaginella moellendorffii SELMODRAFT_36646 I 0.689
Si002016m.g Setaria italica Si002016m.g I 0.689
ORUFI01G40390 Oryza rufipogon ORUFI01G40390 I 0.689
ORGLA01G0309000 Oryza glaberrima ORGLA01G0309000 I 0.689
OLONG_001321 Oryza longistaminata OLONG_001321 I 0.689
OMERI01G34110 Oryza meridionalis OMERI01G34110 I 0.689
ONIVA01G41940 Oryza nivara ONIVA01G41940 I 0.689
OGLUM01G41000 Oryza glumaepatula OGLUM01G41000 I 0.689
OPUNC01G35910 Oryza punctata OPUNC01G35910 I 0.689
GSMUA_Achr10G23650_001 Musa acuminata GSMUA_Achr10G23650_001 N 0.687
Pm017445 Prunus mume Pm017445 N 0.686
PRUPE_ppa026574mg Prunus persica PRUPE_ppa026574mg N 0.686
gene03235-v1.0-hybrid Fragaria vesca gene03235-v1.0-hybrid N 0.683
ARR21 Arabidopsis thaliana AT5G07210 N 0.681
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.680
Ca_15151 Cicer arietinum Ca_15151 I 0.680
MDP0000124301 Malus domestica MDP0000124301 I 0.680
MDP0000155328 Malus domestica MDP0000155328 I 0.680
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.680
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.680
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.679
Bra020390 Brassica rapa Bra020390 I 0.679
Lus10027416.g Linum usitatissimum Lus10027416.g N 0.679
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.679
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.679
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.679
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.679
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.679
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.679
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.679
29737.m001227 Ricinus communis 29737.m001227 I 0.679
Bo2g028820 Brassica oleracea Bo2g028820 I 0.679
TCM_037098 Theobroma cacao TCM_037098 I 0.679
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.678
Pm005877 Prunus mume Pm005877 I 0.678
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.677
Ca_14780 Cicer arietinum Ca_14780 I 0.677
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.676
GRMZM2G074908 Zea mays GRMZM2G074908 I 0.676
fgeneshCV_pg.C_scaffold_15000185 Chlorella vulgaris fgeneshCV_pg.C_scaffold_15000185 I 0.674
gw1.15.242.1 Coccomyxa subellipsoidea C169 gw1.15.242.1 I 0.674
estExt_fgenesh2_pg.C_Chr_120081 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_120081 I 0.674
est_orfs.10_1861_4270447:1 Micromonas pusilla est_orfs.10_1861_4270447:1 I 0.674
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.672
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.672
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.672
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.672
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.672
Thhalv10004402m.g Eutrema salsugineum Thhalv10004402m.g I 0.671
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.669
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.668
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.668
TCM_045790 Theobroma cacao TCM_045790 I 0.667